Factsheet for Bra021173.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20193	Canola	plasma membrane, plastid	97.03	98.92
AT3G16340.1	Thale cress	plasma membrane	89.67	89.48
TraesCS7B01G271500.1	Wheat	cytosol	32.27	74.27
Bra003527.1-P	Field mustard	plasma membrane, plastid	70.28	68.96
OQU76555	Sorghum	mitochondrion, plasma membrane	62.92	68.75
Os06t0554800-01	Rice	plasma membrane	56.4	68.29
Bra026156.1-P	Field mustard	plastid	69.5	68.01
Bra016669.1-P	Field mustard	plastid	69.14	67.99
HORVU7Hr1G088630.1	Barley	vacuole	62.49	67.92
KRH23404	Soybean	plasma membrane	71.2	67.65
Solyc03g120980.2.1	Tomato	plastid	71.69	67.53
PGSC0003DMT400006729	Potato	plastid	71.62	67.47
Bra027171.1-P	Field mustard	plasma membrane	90.87	66.81
GSMUA_Achr9P16240_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	70.77	66.67
TraesCS7A01G356200.1	Wheat	plasma membrane	55.91	66.22
Zm00001d036986_P002	Maize	plasma membrane	69.36	64.99
Zm00001d046277_P002	Maize	cytosol, nucleus, plasma membrane	69.57	63.83
GSMUA_Achr11P...	Banana	plasma membrane	64.97	63.75
EES01392	Sorghum	cytosol, peroxisome, plasma membrane	63.77	60.84
Zm00001d043598_P003	Maize	cytosol, nucleus, plasma membrane	63.69	60.48
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	57.61	57.61
Bra023065.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	56.69	56.05
Bra034314.1-P	Field mustard	cytosol, peroxisome, plasma membrane	54.56	54.3
Bra021598.1-P	Field mustard	cytosol, peroxisome, plasma membrane	54.78	54.16
Bra000469.1-P	Field mustard	cytosol	53.57	53.92
Bra005208.1-P	Field mustard	cytosol, nucleus, plasma membrane	51.03	50.95
Bra017198.1-P	Field mustard	mitochondrion	51.59	49.52
Bra003137.1-P	Field mustard	cytosol, peroxisome, plasma membrane	51.66	49.46
Bra025424.1-P	Field mustard	cytosol, nucleus, plasma membrane	47.7	48.11
Bra012797.1-P	Field mustard	cytosol	46.57	47.99
Bra017241.1-P	Field mustard	cytosol, mitochondrion, nucleus, plasma membrane	57.47	35.77

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans	InterPro:ABC_trans_N
InterPro:ABC_transporter-like	EnsemblPlantsGene:Bra021173	EnsemblPlants:Bra021173.1	EnsemblPlants:Bra021173.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	UniProt:M4DXC7	InterPro:P-loop_NTPase	InterPro:PDR_assoc
PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF224	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002543BC8	SEG:seg

Description

AT3G16340 (E=0.0) ATPDR1, PDR1 | PDR1; ATPase, coupled to transmembrane movement of substances

Coordinates

chrA01:-:23579747..23588057

Molecular Weight (calculated)

160027.0 Da

IEP (calculated)

8.044

GRAVY (calculated)

0.067

Length

1413 amino acids

Sequence
(BLAST)

0001: METMSRSLSK SLGEVLTSSS NHFSRRSGSI DDHDEETLTW AALEKLPTFT RLRTTIIQPH ELVDVTKLGV GDRQKFIDSV FKVTDEDNEK FLKKFRSRID
0101: RVGIKLPTVE VRFEKLTIEA DCHIGKRALP TLPNVALNIA ERGLRLFGLN FDKTTKLTIL REASGIMKPS RMTLLLGPPS SGKTTLLLAL AGKLDPSLKV
0201: TGRVTYNGYG LEEIVPQKTS AYISQNDVHI GVMTVQETLD FSARCQGIGT RYDLLSELVR REKDAGILPE PEVDLFMKSI AAGNVKSSLI TDYTLKILGL
0301: DICKDTMVGD EMTRGISGGQ KKRVTTGEMI VGPTKTLFMD EISTGLDSST TYQIVKCFQE VVRFTDATVL MSLLQPAPET FGLFDDIILL SEGQIVYQGP
0401: RDHVLSFFEA CGFKCPDRKG TADFLQEVTS RKDQEQYWAD TTKPYIYIPV SEFSKQSKTF HVGANLENEL SVPYDRFKSH PASLVFNKHS VPKSDLFKIC
0501: WDRELLLIKR NAFFYVFKTV QIIIMALITS TVYLRTGMGT KDENDGAVYI GALIFSMIAN MFNGFAELSL MIQRLPVFYK QRDLLFHPPW TFTLPAFLLS
0601: IPVTIFESVV WVSITYYLIG FAPEFIRYVK HLLVIFLTQQ MAGSIFRFTA ATCRFMILAN TGGSLVILLL FLLGGFIIPR GEIPIWWKWA YWVSPMAYTY
0701: DALTVNEMLA PRWMNQQSSD NSTKLGLAVL EMFDAFTDPN WYWIGVGGIL GFTILFNILV TLALAFLNPL EKPQAIVTKE KTEENRAASG SESESSYAKR
0801: GMVLPFTPYT MSFDNVNYYV DMPKEMKEEE GAKDKLQLLR EVTGVFRPGV LTALMGVSGA GKTTLMDVLA GRKTGGYIEG DIRISGFPKR QETFARISGY
0901: CEQNDIHSPQ VTVRESLIYS AFLRLPKEIT KDEKMRFVDQ VMELVELKSL KDAMVGLPGI TGLSTEQRKR LTIAVELVAN PSIIFMDEPT SGLDARAAAI
1001: VMRTVRNTVD TGRTVVCTIH QPSIDIFEAF DELLLMKRGG QVIYAGPLGQ NSHKIIEYFQ AIHGVQEIKE KYNPATWMLE VSSMAAEAKL EIDFAEHYKT
1101: SLLYEQNKKL VKELSTPPQG EKDLYFSTQF SQSLLGQFKS CLWKQWITYW RTPDYNLARF FFTLVAALMV GSIFWKVGTK RDNANDLTKV IGAMYAAVLF
1201: VGVNNSTSVQ PLVAVERTVF YRERAAKMYS ALPYALAQVV CEVPYVLFQT TYYTLIVYTM LCFEWTMVKF FWFFFVSFVS FLYFTYYGMM AVAITPNQQV
1301: AAVFAGAFYG LFNLFSGFLI PRPRIPKWWV WYYWICPVAW TVYGLIVSQY GDVEDTIKVP GMMNDPTIKW YIKNHYGYDP NFMSSIAAVL VGFTVFFAFM
1401: FAFGIKMLNF QQR

Best Arabidopsis Sequence Match ( AT3G16340.1 )
(BLAST)

0001: METLSRSLSK SLGELLASNS NNHFSRRSGS TIDDHDEEAL KWAALEKLPT FARLRTTIIH PHEDLVDVTK LGVDDRQKFI DSIFKVTEED NEKFLKKFRN
0101: RIDRVRIKLP TVEVRFEKVT IEANCHIGKR ALPTLPNAAL NIAERGLRLL GFNFTKTTKV TILRDVSGII KPSRMTLLLG PPSSGKTTLL LALAGKLDQS
0201: LKVTGRVTYN GHGLEEFVPQ KTSAYISQND VHVGVMTVQE TLDFSARCQG VGTRYDLLSE LVRREKDAGI LPEPEVDLFM KSIAAGNVKS SLITDYTLRI
0301: LGLDICKDTV VGDEMIRGIS GGQKKRVTTG EMIVGPTKTL FMDEISTGLD SSTTYQIVKC LQEIVRFTDA TVLMSLLQPA PETFELFDDI ILLSEGQIVY
0401: QGPRDHVLTF FETCGFKCPD RKGTADFLQE VTSRKDQEQY WADSKKPYSY ISVSEFSKRF RTFHVGANLE KDLSVPYDRF KSHPASLVFK KHSVPKSQLF
0501: KVCWDRELLL MKRNAFFYIT KTVQIIIMAL IASTVYLRTE MGTKNESDGA VYIGALMFSM IVNMFNGFAE LALMIQRLPV FYKQRDLLFH PPWTFSLPTF
0601: LLGIPISIFE SVVWVTITYY MIGFAPELSR FLKHLLVIFL TQQMAGGIFR FIAATCRSMI LANTGGALVI LLLFLLGGFI VPRGEIPKWW KWAYWVSPMA
0701: YTYDALTVNE MLAPRWINQP SSDNSTSLGL AVLEIFDIFT DPNWYWIGVG GILGFTVLFN ILVTLALTFL NPLEKQQAVV SKENTEENRA ENGSKSKSID
0801: VKRGMVLPFT PLTMSFDNVN YYVDMPKEMK EQGVSKDKLQ LLKEVTGVFR PGVLTALMGV SGAGKTTLMD VLAGRKTGGY IEGDIRISGF PKRQETFARI
0901: SGYCEQNDIH SPQVTVKESL IYSAFLRLPK EVTKYEKMRF VDEVMELVEL ESLKDAVVGL PGITGLSTEQ RKRLTIAVEL VANPSIIFMD EPTSGLDARA
1001: AAIVMRTVRN TVDTGRTVVC TIHQPSIDIF EAFDELLLLK RGGQVIYAGP LGQNSHKIIE YFQAIHGVPK IKEKYNPATW MLEVSSMAAE AKLEIDFAEH
1101: YKTSSLYQQN KNLVKELSTP PQGASDLYFS TRFSQSLLGQ FKSCLWKQWI TYWRTPDYNL ARFFFTLAAA VMLGSIFWKV GTKRENANDL TKVIGAMYAA
1201: VLFVGVNNSS SVQPLIAVER SVFYRERAAE MYSALPYALA QVVCEIPYVL IQTTYYTLII YAMMCFEWTL AKFFWFYFVS FMSFLYFTYY GMMTVALTPN
1301: QQVAAVFAGA FYGLFNLFSG FVIPRPRIPK WWIWYYWICP VAWTVYGLIV SQYGDVEDTI KVPGMANDPT IKWYIENHYG YDADFMIPIA TVLVGFTLFF
1401: AFMFAFGIRT LNFQQR

Arabidopsis Description

ABCG29ABC transporter G family member 29 [Source:UniProtKB/Swiss-Prot;Acc:Q94A18]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.