Factsheet for AT3G16340.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70099	Canola	cytosol	28.11	92.56
Bra021173.1-P	Field mustard	plasma membrane	89.48	89.67
CDX97743	Canola	plasma membrane	89.05	89.24
CDY20193	Canola	plasma membrane, plastid	87.29	89.18
CDY30162	Canola	plasma membrane	55.23	87.96
TraesCS7B01G271500.1	Wheat	cytosol	32.56	75.08
OQU76555	Sorghum	mitochondrion, plasma membrane	64.12	70.22
Os06t0554800-01	Rice	plasma membrane	57.34	69.58
HORVU7Hr1G088630.1	Barley	vacuole	63.49	69.15
AT1G59870.1	Thale cress	plasma membrane, plastid	71.54	68.96
Solyc03g120980.2.1	Tomato	plastid	72.74	68.67
PGSC0003DMT400006729	Potato	plastid	72.74	68.67
GSMUA_Achr9P16240_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	72.1	68.07
KRH23404	Soybean	plasma membrane	71.33	67.92
TraesCS7A01G356200.1	Wheat	plasma membrane	56.92	67.56
Zm00001d036986_P002	Maize	plasma membrane	70.13	65.85
Bra027171.1-P	Field mustard	plasma membrane	88.84	65.45
Zm00001d046277_P002	Maize	cytosol, nucleus, plasma membrane	70.76	65.06
GSMUA_Achr11P...	Banana	plasma membrane	65.96	64.86
Zm00001d043598_P003	Maize	cytosol, nucleus, plasma membrane	64.76	61.63
EES01392	Sorghum	cytosol, peroxisome, plasma membrane	64.34	61.51
AT1G15520.1	Thale cress	plastid	58.69	58.4
AT2G36380.1	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	58.97	57.47
AT1G66950.1	Thale cress	plastid	58.26	56.74
AT2G26910.1	Thale cress	cytosol, peroxisome, plasma membrane	54.73	54.58
AT2G29940.1	Thale cress	cytosol, peroxisome, plasma membrane	54.94	54.56
AT3G53480.1	Thale cress	cytosol, peroxisome, plasma membrane	52.47	51.24
AT3G30842.1	Thale cress	cytosol	49.44	49.37
AT4G15233.1	Thale cress	cytosol, peroxisome, plasma membrane	48.23	49.07

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:820881	InterPro:AAA+_ATPase	ProteinID:AAB63643.1	InterPro:ABCG_PDR_1
InterPro:ABCG_PDR_2	InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	ProteinID:AEE75799.1	ArrayExpress:AT3G16340
EnsemblPlantsGene:AT3G16340	RefSeq:AT3G16340	TAIR:AT3G16340	RefSeq:AT3G16340-TAIR-G	EnsemblPlants:AT3G16340.1	TAIR:AT3G16340.1
Symbol:ATPDR1	EMBL:AY050448	Unigene:At.48129	ProteinID:BAB01273.1	ProteinID:DAA00870.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015850	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0019748	GO:GO:0042626	GO:GO:1901140	GO:GO:1901141	InterPro:IPR003439
RefSeq:NP_566543.1	InterPro:P-loop_NTPase	Symbol:PDR1	InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061
PFAM:PF08370	PFAM:PF14510	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0005059
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF224
UniProt:Q94A18	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00000A1D75	SEG:seg

Description

ABCG29ABC transporter G family member 29 [Source:UniProtKB/Swiss-Prot;Acc:Q94A18]

Coordinates

chr3:+:5539385..5546487

Molecular Weight (calculated)

160307.0 Da

IEP (calculated)

8.500

GRAVY (calculated)

0.063

Length

1416 amino acids

Sequence
(BLAST)

0001: METLSRSLSK SLGELLASNS NNHFSRRSGS TIDDHDEEAL KWAALEKLPT FARLRTTIIH PHEDLVDVTK LGVDDRQKFI DSIFKVTEED NEKFLKKFRN
0101: RIDRVRIKLP TVEVRFEKVT IEANCHIGKR ALPTLPNAAL NIAERGLRLL GFNFTKTTKV TILRDVSGII KPSRMTLLLG PPSSGKTTLL LALAGKLDQS
0201: LKVTGRVTYN GHGLEEFVPQ KTSAYISQND VHVGVMTVQE TLDFSARCQG VGTRYDLLSE LVRREKDAGI LPEPEVDLFM KSIAAGNVKS SLITDYTLRI
0301: LGLDICKDTV VGDEMIRGIS GGQKKRVTTG EMIVGPTKTL FMDEISTGLD SSTTYQIVKC LQEIVRFTDA TVLMSLLQPA PETFELFDDI ILLSEGQIVY
0401: QGPRDHVLTF FETCGFKCPD RKGTADFLQE VTSRKDQEQY WADSKKPYSY ISVSEFSKRF RTFHVGANLE KDLSVPYDRF KSHPASLVFK KHSVPKSQLF
0501: KVCWDRELLL MKRNAFFYIT KTVQIIIMAL IASTVYLRTE MGTKNESDGA VYIGALMFSM IVNMFNGFAE LALMIQRLPV FYKQRDLLFH PPWTFSLPTF
0601: LLGIPISIFE SVVWVTITYY MIGFAPELSR FLKHLLVIFL TQQMAGGIFR FIAATCRSMI LANTGGALVI LLLFLLGGFI VPRGEIPKWW KWAYWVSPMA
0701: YTYDALTVNE MLAPRWINQP SSDNSTSLGL AVLEIFDIFT DPNWYWIGVG GILGFTVLFN ILVTLALTFL NPLEKQQAVV SKENTEENRA ENGSKSKSID
0801: VKRGMVLPFT PLTMSFDNVN YYVDMPKEMK EQGVSKDKLQ LLKEVTGVFR PGVLTALMGV SGAGKTTLMD VLAGRKTGGY IEGDIRISGF PKRQETFARI
0901: SGYCEQNDIH SPQVTVKESL IYSAFLRLPK EVTKYEKMRF VDEVMELVEL ESLKDAVVGL PGITGLSTEQ RKRLTIAVEL VANPSIIFMD EPTSGLDARA
1001: AAIVMRTVRN TVDTGRTVVC TIHQPSIDIF EAFDELLLLK RGGQVIYAGP LGQNSHKIIE YFQAIHGVPK IKEKYNPATW MLEVSSMAAE AKLEIDFAEH
1101: YKTSSLYQQN KNLVKELSTP PQGASDLYFS TRFSQSLLGQ FKSCLWKQWI TYWRTPDYNL ARFFFTLAAA VMLGSIFWKV GTKRENANDL TKVIGAMYAA
1201: VLFVGVNNSS SVQPLIAVER SVFYRERAAE MYSALPYALA QVVCEIPYVL IQTTYYTLII YAMMCFEWTL AKFFWFYFVS FMSFLYFTYY GMMTVALTPN
1301: QQVAAVFAGA FYGLFNLFSG FVIPRPRIPK WWIWYYWICP VAWTVYGLIV SQYGDVEDTI KVPGMANDPT IKWYIENHYG YDADFMIPIA TVLVGFTLFF
1401: AFMFAFGIRT LNFQQR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.