Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plasma membrane 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85303 | Canola | cytosol | 82.02 | 83.01 |
| CDY64951 | Canola | cytosol, peroxisome, plasma membrane | 80.75 | 82.97 |
| Bra025424.1-P | Field mustard | cytosol, nucleus, plasma membrane | 81.88 | 82.87 |
| GSMUA_AchrUn_... | Banana | mitochondrion, plasma membrane | 54.8 | 55.11 |
| GSMUA_Achr5P06180_001 | Banana | plasma membrane | 54.02 | 55.03 |
| AT1G15520.1 | Thale cress | plastid | 55.15 | 54.95 |
| Zm00001d053612_P003 | Maize | mitochondrion, plasma membrane | 55.71 | 54.75 |
| EES04729 | Sorghum | mitochondrion | 55.36 | 54.44 |
| TraesCS6B01G205900.1 | Wheat | plasma membrane | 54.94 | 53.95 |
| TraesCS6A01G178500.1 | Wheat | plasma membrane | 54.87 | 53.73 |
| HORVU6Hr1G036800.21 | Barley | plasma membrane | 54.73 | 53.59 |
| TraesCS6D01G166100.1 | Wheat | plasma membrane | 54.73 | 53.59 |
| EES08826 | Sorghum | mitochondrion | 53.1 | 52.47 |
| Zm00001d048860_P001 | Maize | cytosol, nucleus, plasma membrane | 52.82 | 51.8 |
| AT2G36380.1 | Thale cress | cytosol, mitochondrion, peroxisome, plasma membrane | 51.13 | 49.9 |
| AT3G16340.1 | Thale cress | plasma membrane | 49.37 | 49.44 |
| AT1G66950.1 | Thale cress | plastid | 50.56 | 49.31 |
| AT2G26910.1 | Thale cress | cytosol, peroxisome, plasma membrane | 49.37 | 49.3 |
| AT1G59870.1 | Thale cress | plasma membrane, plastid | 49.51 | 47.79 |
| AT2G29940.1 | Thale cress | cytosol, peroxisome, plasma membrane | 47.39 | 47.12 |
| AT3G53480.1 | Thale cress | cytosol, peroxisome, plasma membrane | 45.7 | 44.69 |
| AT4G15233.1 | Thale cress | cytosol, peroxisome, plasma membrane | 43.58 | 44.4 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | EntrezGene:822863 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_1 | InterPro:ABCG_PDR_2 |
| InterPro:ABC_2_trans | InterPro:ABC_trans_N | InterPro:ABC_transporter-like | ProteinID:AEE77665.2 | ArrayExpress:AT3G30842 | EnsemblPlantsGene:AT3G30842 |
| RefSeq:AT3G30842 | TAIR:AT3G30842 | RefSeq:AT3G30842-TAIR-G | EnsemblPlants:AT3G30842.1 | TAIR:AT3G30842.1 | ProteinID:BAB02609.1 |
| ProteinID:DAA00878.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| InterPro:IPR003439 | RefSeq:NP_001319673.1 | InterPro:P-loop_NTPase | Symbol:PDR10 | InterPro:PDR_assoc | PFAM:PF00005 |
| PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF446 |
| UniProt:Q7PC85 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI00001D9702 | SEG:seg |
Description
ABCG38ABC transporter G family member 38 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC85]
Coordinates
chr3:-:12593810..12600432
Molecular Weight (calculated)
161371.0 Da
IEP (calculated)
8.805
GRAVY (calculated)
-0.022
Length
1418 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAHYRVSSEV ENIMNRDRSH RKNEEEDEEE ALKLAAMEKL QRLPTYDRAR KAVLKGITGG FKEIDMKDLG LAERRELFDR VMTMDDEDWH GEYLRRLKSR
0101: FDRVSLHLPT IEVRFEDLNV TAEAYAGSKT VPTVLNSYVN LLKGIGTKIR VLPDRKKRIS ILNDVSGIIK PGRLTLLLGP PGSGKSTLLK ALSGKTETGL
0201: RSTGKVTYNG HELHEFVPER TAGYIDQYDV HLPDLTVRET LKFSAKCQGV GTGYDMLAEL LRREKDLNIK PDPYLDALMK ASVIKGHKEY VVTDYVLKVL
0301: GLEICADTIV GNHMKRGISG GQKKRVTTGE MLVGPVGAFF MDNISDGLDS STTFQIVKSI KQMIHVFDKT ALISLLQPPP ETFELFDDVI ILGEGHIVYQ
0401: GPREDVLEFF EFMGFKCPER KGIADYLQEI LSKKDQEQYW ANPELPYRYV TAKKFEEGFK IHHFGRAMRS QLATPFDRLK NHRAALTRTT YGASKLELLK
0501: ACLERESILM KRNLRTFVLK SLQLIINAIL IGVVFWQQKN YPSTVEDGII YMGAIYLEVQ MIVFSGFFEL PMTIDKLPVF YKQRHFSFYP SWAFSLPTSI
0601: ITFPLSFVEV FIVVLITYFT IGYDLTVPSF LKHYLVLALC GQMSYGLFRC IAAVTRNHVV SNTMGCLAVM WLMTFSGYVL SRNQVHKWLT WAYWTSPMMY
0701: IQTAVSVNEF RSESWKDGLG VAVLKSRGFF VETYWYWIGL LALILSTILS NIITSLCLAF LKQYGISKTA VLPDEREEAD SNNTTGRDYT GTTMERFFDR
0801: VVTTRTCNDK KLRIPFKPLY MTFENITYSV DTPKEMKEKG IRENKLVLLN GLSGAFRPGV LTALMGVSGA GKTTLMDVLA GRKNTGYIQG EIYVSGFPKK
0901: QDSFARVSGY CEQSDIHSPL LTVYESLLYS AWLRLPPDID THTRELFIEE VMELIELKAL REMLVGYVGI SGLSTEQRKR MTIAVELVAN PSILFMDEPT
1001: SGLDARAAAI VMRTVRNTVD TGRTVVCTIH QPSIDIFESF DELFLLTRGG EEIYVGPIGH HSSQLIEYFE GIRGVGKIKE GYNPATWALE VTTRAQEDVL
1101: GVTFAQVYKK SNLYRRNKDL IKELNNIPPH AQDIHFSTKY SQSYLSQFQA CLWKQHKSYW RNVPYNAVRF SFGAAVGIMY GIIFWSLGKR KGTRQDIFNS
1201: VGAMSTVVGF LSSQSAATVR PVVIAERTVF YREAGAGMYS ALPYAFSQVI IEIPYTMAQA CIYGVIVYGM IGYEWTASKF FLNIFFTFIS ILYSIYTGIM
1301: VISVSPNQEI ASILNGVIST SWNVFSGFTI PRPRMHVWLR WFTYVCPGWW GLYGLTIAQY GDVETRLDTG ETVVEFMKNY YGYEYNFLWV VSLTLIAFSM
1401: FFVFIYAFSV KILNFQKR
0101: FDRVSLHLPT IEVRFEDLNV TAEAYAGSKT VPTVLNSYVN LLKGIGTKIR VLPDRKKRIS ILNDVSGIIK PGRLTLLLGP PGSGKSTLLK ALSGKTETGL
0201: RSTGKVTYNG HELHEFVPER TAGYIDQYDV HLPDLTVRET LKFSAKCQGV GTGYDMLAEL LRREKDLNIK PDPYLDALMK ASVIKGHKEY VVTDYVLKVL
0301: GLEICADTIV GNHMKRGISG GQKKRVTTGE MLVGPVGAFF MDNISDGLDS STTFQIVKSI KQMIHVFDKT ALISLLQPPP ETFELFDDVI ILGEGHIVYQ
0401: GPREDVLEFF EFMGFKCPER KGIADYLQEI LSKKDQEQYW ANPELPYRYV TAKKFEEGFK IHHFGRAMRS QLATPFDRLK NHRAALTRTT YGASKLELLK
0501: ACLERESILM KRNLRTFVLK SLQLIINAIL IGVVFWQQKN YPSTVEDGII YMGAIYLEVQ MIVFSGFFEL PMTIDKLPVF YKQRHFSFYP SWAFSLPTSI
0601: ITFPLSFVEV FIVVLITYFT IGYDLTVPSF LKHYLVLALC GQMSYGLFRC IAAVTRNHVV SNTMGCLAVM WLMTFSGYVL SRNQVHKWLT WAYWTSPMMY
0701: IQTAVSVNEF RSESWKDGLG VAVLKSRGFF VETYWYWIGL LALILSTILS NIITSLCLAF LKQYGISKTA VLPDEREEAD SNNTTGRDYT GTTMERFFDR
0801: VVTTRTCNDK KLRIPFKPLY MTFENITYSV DTPKEMKEKG IRENKLVLLN GLSGAFRPGV LTALMGVSGA GKTTLMDVLA GRKNTGYIQG EIYVSGFPKK
0901: QDSFARVSGY CEQSDIHSPL LTVYESLLYS AWLRLPPDID THTRELFIEE VMELIELKAL REMLVGYVGI SGLSTEQRKR MTIAVELVAN PSILFMDEPT
1001: SGLDARAAAI VMRTVRNTVD TGRTVVCTIH QPSIDIFESF DELFLLTRGG EEIYVGPIGH HSSQLIEYFE GIRGVGKIKE GYNPATWALE VTTRAQEDVL
1101: GVTFAQVYKK SNLYRRNKDL IKELNNIPPH AQDIHFSTKY SQSYLSQFQA CLWKQHKSYW RNVPYNAVRF SFGAAVGIMY GIIFWSLGKR KGTRQDIFNS
1201: VGAMSTVVGF LSSQSAATVR PVVIAERTVF YREAGAGMYS ALPYAFSQVI IEIPYTMAQA CIYGVIVYGM IGYEWTASKF FLNIFFTFIS ILYSIYTGIM
1301: VISVSPNQEI ASILNGVIST SWNVFSGFTI PRPRMHVWLR WFTYVCPGWW GLYGLTIAQY GDVETRLDTG ETVVEFMKNY YGYEYNFLWV VSLTLIAFSM
1401: FFVFIYAFSV KILNFQKR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.