Factsheet for GSMUA_Achr5P06180_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	91.31	90.14
EES04729	Sorghum	mitochondrion	87.43	84.4
Zm00001d053612_P003	Maize	mitochondrion, plasma membrane	87.07	83.99
HORVU6Hr1G036800.21	Barley	plasma membrane	84.34	81.08
TraesCS6B01G205900.1	Wheat	plasma membrane	84.05	81.02
TraesCS6A01G178500.1	Wheat	plasma membrane	84.12	80.87
TraesCS6D01G166100.1	Wheat	plasma membrane	84.05	80.8
EES08826	Sorghum	mitochondrion	80.24	77.84
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	63.29	77.21
Zm00001d048860_P001	Maize	cytosol, nucleus, plasma membrane	79.96	76.97
GSMUA_Achr9P02950_001	Banana	plasma membrane	72.34	72.5
GSMUA_Achr6P34530_001	Banana	plasma membrane	68.25	72.02
GSMUA_Achr9P01490_001	Banana	plasma membrane	70.91	66.11
GSMUA_Achr9P16240_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	61.64	57.2
GSMUA_Achr11P...	Banana	plasma membrane	57.83	55.9
GSMUA_Achr8P07660_001	Banana	mitochondrion, peroxisome, plasma membrane	60.92	54.82
CDY64951	Canola	cytosol, peroxisome, plasma membrane	53.88	54.35
Bra025424.1-P	Field mustard	cytosol, nucleus, plasma membrane	54.67	54.32
CDX85303	Canola	cytosol	54.53	54.18
AT3G30842.1	Thale cress	cytosol	55.03	54.02
GSMUA_Achr7P08510_001	Banana	plasma membrane	59.77	52.39
GSMUA_Achr3P01060_001	Banana	plasma membrane	49.43	50.89
GSMUA_Achr1P08050_001	Banana	cytosol, peroxisome, plasma membrane	47.05	50.38
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	50.22	48.14
GSMUA_Achr1P08030_001	Banana	plasma membrane	44.9	48.11
GSMUA_Achr1P18390_001	Banana	cytosol, nucleus, plasma membrane, plastid	51.65	47.84

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_trans_N	InterPro:ABC_transporter-like	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	EnsemblPlantsGene:GSMUA_Achr5G06180_001	EnsemblPlants:GSMUA_Achr5P06180_001	EnsemblPlants:GSMUA_Achr5T06180_001	InterPro:IPR003439	UniProt:M0SW47
InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF443	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI000295F150	SEG:seg	:	:	:	:

Description

Putative pleiotropic drug resistance protein 7 [Source:GMGC_GENE;Acc:GSMUA_Achr5G06180_001]

Coordinates

chr5:+:4569757..4576347

Molecular Weight (calculated)

157592.0 Da

IEP (calculated)

6.717

GRAVY (calculated)

0.041

Length

1392 amino acids

Sequence
(BLAST)

0001: MDSNYRLGSI GGSMRGSIRR SVSSWRTSSA DVFGRSGRDE DDEEALKWAA LEKLPTYDRM RKGIMTGEAG DKQEVDIQDL GMQDRKKLLE RLVRTAEEDN
0101: ERFLLKLRNR MERVGIDNPT IEVRFEHLTV DAEAYVGNRG VPTFFNFFYN KIADVLSYLH MVPSGKRPLS ILHDISGIIR PCRMTLLLGP PGSGKTTLLL
0201: ALAGKLDSTL KESGRLTYNG HDMDEFVPQR TSAYIGQHDL HIGEMTVRET LNFSARCQGV GTRYDMLTEL SRREKEANIK PDPDIDVYMK AISVEGQESV
0301: ITDYILKILG LEICADTMVG DAMIRGISGG QKKRVTTGEM LVGPAKALFM DEISTGLDSS TTYQIVNSLR QSVHILGGTA LIALLQPAPE TYDLFDDIIL
0401: LSEGQIVYQG PRENVLEFFE KMGFRCPERK GVADFLQEVT SRKDQHQYWS IEDEPYRYLL KASISREWLL MKRNSFVYIF KVVQLIILGT IAMTVFLRTK
0501: MPRKTVEDGV IFLGAMFLGL VTHLFNGFAE LAMSIAKLPI FYKQRDLLFY PSWAYALPTW ILKIPISFLE CAVWIGMTYY VIGFDPNIER FFRHYLLLVL
0601: ISQMASGLFR LLAALGREMV VADTFGSFAQ LVLLVLGGFL ISRDHIKKWW IWGYWSSPLM YAQNAIAVNE FLGHSWQKVN LTESPDTLGV QILHARGIFV
0701: DSNWYWIGAG GLLGYIFLFN ILFVFFLDWL DPLGKGQAVI SEEELKEKQA NRTGERVEML PAAAKGRDGG RATRNESSTE NRKKGMVLPF APLSITFDDI
0801: QYSVDMPQEM KDKGIEEDRL VLLKGVSGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNICISG YPKKQETFAR ISGYCEQNDI HSPHVTVYES
0901: LLYSAWLRLP PEVDAETRKM FIEEVMELVE LTSLRGALVG LPGVNGLSTE QRKRLTIAVE LVANPSIIFM DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV
1001: CTIHQPSIDI FEAFDELFLM KRGGEEIYVG PLGRNSCHLI NYFEGVEGVR KIKDGYNPAT WMLEVTTLAQ EEMLGVDFAE IYKNSDLHRR NKALIGELSA
1101: PPPGSKDLFF PTQYSQSFLT QCIACLWKQH KSYWRNPSYT ATRIFFTTVI ALIFGTIFWK LGQKVTTKQD LLNSLGSMYA AVLFIGIQNG QTVQPIVDVE
1201: RTVFYREKAA GMYSALPYAF AQVLIEIPHI FLQTVLYGLI VYSMIGFEWT MEKFFWYLFF MFFTFMYFTF YGMMAVAMTP NSDIAAIVST AFYAIWNIFA
1301: GFLIPRPRIP VWWRWYSWAC PVAWTLYGLV ASQFGDNQTI MEGGESVEEY VRRFFGFRHD FLGVVAVAVV GFTVLFAFVF AFSIKVFNFQ RR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.