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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • cytosol 1
  • plasma membrane 3
  • mitochondrion 2
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G178500.1 Wheat plasma membrane 98.14 98.14
TraesCS6B01G205900.1 Wheat plasma membrane 97.72 97.99
TraesCS6D01G166100.1 Wheat plasma membrane 97.93 97.93
EES04729 Sorghum mitochondrion 89.09 89.46
Zm00001d053612_P003 Maize mitochondrion, plasma membrane 88.95 89.26
GSMUA_Achr5P06180_001 Banana plasma membrane 81.08 84.34
GSMUA_AchrUn_... Banana mitochondrion, plasma membrane 81.01 83.19
EES08826 Sorghum mitochondrion 82.32 83.07
Zm00001d048860_P001 Maize cytosol, nucleus, plasma membrane 81.49 81.6
HORVU3Hr1G053350.8 Barley vacuole 67.82 67.4
HORVU7Hr1G092510.2 Barley plasma membrane 67.06 67.38
HORVU7Hr1G092380.8 Barley cytosol 66.44 66.48
HORVU3Hr1G053380.1 Barley cytosol, mitochondrion, peroxisome, plasma membrane 67.2 65.97
HORVU3Hr1G071470.1 Barley cytosol, mitochondrion, nucleus, plasma membrane 65.47 65.83
HORVU5Hr1G056280.6 Barley cytosol, nucleus, plasma membrane 63.12 63.03
HORVU3Hr1G105140.4 Barley cytosol, peroxisome, plasma membrane 62.02 62.1
HORVU7Hr1G037750.8 Barley cytosol, plasma membrane 44.75 58.33
HORVU7Hr1G088630.1 Barley vacuole 52.35 58.31
HORVU3Hr1G022800.1 Barley plasma membrane 57.04 57.72
HORVU5Hr1G124650.12 Barley plasma membrane 29.56 56.39
AT3G30842.1 Thale cress cytosol 53.59 54.73
CDY64951 Canola cytosol, peroxisome, plasma membrane 52.0 54.57
Bra025424.1-P Field mustard cytosol, nucleus, plasma membrane 52.49 54.25
CDX85303 Canola cytosol 52.28 54.03
HORVU5Hr1G106850.1 Barley cytosol 55.73 53.94
HORVU7Hr1G016870.2 Barley cytosol 50.69 52.73
HORVU3Hr1G116680.1 Barley mitochondrion, plasma membrane 44.48 50.91
HORVU7Hr1G056530.12 Barley cytosol, nucleus 47.1 50.56
HORVU5Hr1G049490.3 Barley nucleus, plastid 47.58 49.43
HORVU4Hr1G081040.4 Barley cytosol, nucleus, plasma membrane 45.79 49.18
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABCG_PDR_1InterPro:ABCG_PDR_2InterPro:ABC_2_trans
InterPro:ABC_trans_NInterPro:ABC_transporter-likencoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887EnsemblPlantsGene:HORVU6Hr1G036800EnsemblPlants:HORVU6Hr1G036800.21InterPro:IPR003439UniProt:M0XGX1InterPro:P-loop_NTPase
InterPro:PDR_assocPFAM:PF00005PFAM:PF01061PFAM:PF08370PFAM:PF14510PFscan:PS50893
PANTHER:PTHR19241PANTHER:PTHR19241:SF443SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0002960378
SEG:seg:::::
Description
No Description!
Coordinates
chrchr6H:-:182926500..182932935
Molecular Weight (calculated)
162491.0 Da
IEP (calculated)
6.588
GRAVY (calculated)
0.103
Length
1448 amino acids
Sequence
(BLAST)
0001: MEIVRIGSSA GGGSGVRRTA SSWRGASGRS DAFGRSAREE DDEEALRWAA IEKLPTYDRM RKGILLPGAV AGVGGAGQEV DIQGLGLNER KNLIERLIRT
0101: AEEDNERFLL KLRDRMERVG IENPTIEVRF HNLNIDAEAY VGNRGIPTFT NFFSNKIMDV LSALRIVSSG KRPISIIHDI SGVVRPGRMS LLLGPPGSGK
0201: TSLLLALAGK LDSTLKVSGR VTYNGHDMHE FVPQRTSAYI GQHDLHIGEM TVRETLAFSA RCQGVGTRYD MLSELSRREK EANIKPDPDI DVYMKAISVE
0301: GQESVITDYI LKILGLEICA DTMVGDGMIR GISGGQKKRV TTGEMLVGPA KALFMDEIST GLDSSTTYQI INSLRQSVHI LGGTALIALL QPAPETYELF
0401: DDIVLLTEGK IVYQGPRESV LEFFEAVGFR CPERKGIADF LQEVTSRKDQ HQYWCRSDEP YRYISVNDFT EAFKAFHVGR KMGSELRVPF DRTRNHPAAL
0501: TTSKFGISKM ELLKACVSRE WLLMKRNSFV YIFKVVQLII LGTIAMTVFL RTEMHRDTVE DGVIYMGAMF LGLVTHLFNG FAELAMSIAK LPIFYKQRDL
0601: LFYPSWAYGL PTWLLKIPIS FLECAVWICM TYYVIGFDPN IERFFRHYLL LVLISQMASG LFRVLAALGR DMVVADTFGS FAQLVLLILG GFLIARDNIK
0701: AWWIWGYWSS PLMYAQNAIA VNEFLGHSWR MVVDPTESND TLGVQVLKSR GIFVDPNWYW IGVGALLGYI MLFNVLFIVF LDLLDPLGKG QNVISEEELM
0801: EKHVNRTGEN VELLLFGNDS QNSPSNGEGE ITGADTRERG MALPFTPLSI TFDNIRYSVD MPQEMKDKGI TEDRLVLLKG VSGAFRPGVL TALMGVSGAG
0901: KTTLMDVLAG RKTGGYIEGD ISISGYPKNQ ETFARIAGYC EQNDIHSPHV TVYESLVYSA WLRLSPDVDS EARQMFVEQV MGLVELTSLR GALVGLPGVN
1001: GLSTEQRKRL TIAVELVANP SIIFMDEPTS GLDARAAAIV MRAVRNTVDT GRTVVCTIHQ PSIDIFEAFD ELFLMKRGGE DIYVGPLGHN SCHLIDYFEG
1101: VQGVKKIKDG YNPATWMLEV TTLAQEDALG VNFAEVYMNS DLYRRNKALI SDLSTPPPGS TDLYFPKQYA QSFFTQCVAC LWKQHKSYWR NPSYTATRIF
1201: FTTVIALIFG TIFLNLGQKI GKRQDLFNSL GSMYAAVIFI GIQNGQCVQP IVDVERTVFY REKAAGMYSA LPYAFAQVFI EIPHVFLQTI IYGLIVYSLI
1301: GLDWAFMKFF WYMFFMFFTF LYFTFYGMMA VAMTPNSDIA AIVATAFYAV WNIFAGFLIP RPRIPIWWRW YSWACPVAWT LYGLVASQYG DIADVRLEDG
1401: EQVNAFIHRF FGFRHDYVGF MAIGVVGFTV LFAFVFAFSI KVLNFQRR
Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.