Factsheet for HORVU3Hr1G053350.8

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	plasma membrane

vacuole: 16581873

msms PMID: 16581873 doi

A Endler, S Meyer, S Schelbert, T Schneider, W Weschke, SW Peters, F Keller, S Baginsky, E Martinoia, UG Schmidt

University of Zurich, Institute of Plant Biology, CH-8008 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G234400.1	Wheat	plasma membrane	97.8	98.01
TraesCS3A01G217900.1	Wheat	cytosol	97.74	97.94
TraesCS3B01G248400.1	Wheat	cytosol, peroxisome, plasma membrane	97.67	97.87
Os01t0609300-01	Rice	plasma membrane	79.27	89.33
Zm00001d011315_P002	Maize	plasma membrane	85.31	86.08
KXG32863	Sorghum	cytosol, peroxisome, plasma membrane	85.45	85.8
KXG32865	Sorghum	plasma membrane	85.86	85.8
Zm00001d044442_P036	Maize	plasma membrane	87.85	81.32
EER98908	Sorghum	cytosol, nucleus, plasma membrane	81.54	81.31
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	63.62	81.24
GSMUA_Achr9P02950_001	Banana	plasma membrane	72.27	75.81
GSMUA_Achr6P34530_001	Banana	plasma membrane	68.57	75.74
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	31.78	74.08
HORVU3Hr1G053380.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	74.06	73.15
HORVU3Hr1G071470.1	Barley	cytosol, mitochondrion, nucleus, plasma membrane	72.13	72.99
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	71.04	72.84
HORVU7Hr1G092510.2	Barley	plasma membrane	70.42	71.2
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	60.12	70.36
VIT_09s0002g05560.t01	Wine grape	plasma membrane	70.01	70.15
KRH23522	Soybean	mitochondrion	68.63	70.13
Solyc12g019640.1.1	Tomato	plasma membrane	29.24	70.07
HORVU7Hr1G092380.8	Barley	cytosol	69.53	70.01
VIT_04s0008g04790.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	68.98	69.99
PGSC0003DMT400076208	Potato	plastid	69.05	69.86
Solyc09g091660.2.1	Tomato	plastid	68.98	69.79
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	67.54	69.69
KRH52503	Soybean	cytosol, peroxisome, plasma membrane	69.25	69.68
KRH61824	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	69.25	69.63
Solyc08g067620.2.1	Tomato	nucleus	69.32	69.51
KRH09797	Soybean	endoplasmic reticulum	68.02	69.45
KRH47506	Soybean	endoplasmic reticulum	67.88	69.35
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	67.06	69.14
HORVU5Hr1G056280.6	Barley	cytosol, nucleus, plasma membrane	68.77	69.1
CDY39660	Canola	cytosol, nucleus, plasma membrane	67.06	69.05
AT1G15520.1	Thale cress	plastid	67.4	69.01
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	66.92	69.0
Solyc12g098210.1.1	Tomato	plastid	67.12	68.63
HORVU3Hr1G105140.4	Barley	cytosol, peroxisome, plasma membrane	68.02	68.53
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	67.47	68.5
PGSC0003DMT400076209	Potato	plasma membrane	67.26	68.39
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	66.99	68.01
HORVU6Hr1G036800.21	Barley	plasma membrane	67.4	67.82
KRH16029	Soybean	cytosol	67.19	67.66
KRH67471	Soybean	endoplasmic reticulum	66.85	67.4
KRH05088	Soybean	endoplasmic reticulum	66.58	67.04
KRG95762	Soybean	mitochondrion	65.48	66.71
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	55.32	66.23
KRH09795	Soybean	endoplasmic reticulum	67.12	64.68
KRH47220	Soybean	plasma membrane	41.66	63.83
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	6.66	63.82
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	68.7	63.35
HORVU7Hr1G088630.1	Barley	vacuole	52.92	59.31
HORVU3Hr1G022800.1	Barley	plasma membrane	57.58	58.63
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	64.52	58.35
Solyc12g019620.1.1	Tomato	cytosol, nucleus, plasma membrane	33.42	58.18
HORVU7Hr1G037750.8	Barley	cytosol, plasma membrane	43.65	57.25
HORVU5Hr1G124650.12	Barley	plasma membrane	29.44	56.52
HORVU5Hr1G106850.1	Barley	cytosol	56.14	54.68
HORVU7Hr1G016870.2	Barley	cytosol	50.58	52.95
HORVU3Hr1G116680.1	Barley	mitochondrion, plasma membrane	44.27	50.99
HORVU7Hr1G056530.12	Barley	cytosol, nucleus	46.88	50.63
HORVU5Hr1G049490.3	Barley	nucleus, plastid	48.18	50.36
HORVU4Hr1G081040.4	Barley	cytosol, nucleus, plasma membrane	45.44	49.11
VIT_04s0008g04840.t01	Wine grape	plasma membrane	37.41	48.7

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A287L2T7	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2
InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	EnsemblPlantsGene:HORVU3Hr1G053350	EnsemblPlants:HORVU3Hr1G053350.8	InterPro:IPR003439	InterPro:P-loop_NTPase	InterPro:PDR_assoc
PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF273	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000B47D2CA	SEG:seg

Description

No Description!

Coordinates

chrchr3H:+:392302765..392309928

Molecular Weight (calculated)

163951.0 Da

IEP (calculated)

7.595

GRAVY (calculated)

0.039

Length

1457 amino acids

Sequence
(BLAST)

0001: RRRRGEMDAT AEIHKVASMR RGDSGSIWRR GDDVFSRSSR DDDDEEALRW AALEKLPTYD RVRRAILPPL DGGEGAAPGK GVVDVHGLGP RERRALIERL
0101: VRVADEDNER FLLKLKDRLE RVGIEMPTIE VRFEHLVAEA EVRVGNSGLP TVLNSITNTL EEAANALRIL PNRKRTMPIL HDVSGIIKPR RMTLLLGPPG
0201: SGKTTLLLAL AGRLDKDLKV SGNVTYNGHG MEEFVPERTA AYISQHDLHI GEMTVRETLA FSARCQGVGT RFDMLTELSR REKAANIKPD ADIDAFMKAS
0301: SMGGLEANVN TDYILKILGL EMCADTMVGD EMLRGISGGQ RKRVTTGEML VGPAKALFMD EISTGLDSST TFQIVNSLRQ SVHILGGTAV ISLLQPAPET
0401: YNLFDDIILL SDGQVVYQGP RDDVLEFFES VGFKCPERKG IADFLQEVTS KKDQKQYWAR SDEPYRFVPV KDFVCAFQSF HTGRAIRKEL AVPFDKSKSH
0501: PAALTTTRYG VSGTELLKAN IDREILLMKR NSFVYMFRTF QLILMSFIAM TLFFRTKMKR DSVTNGGIYM GALFFGVLMI MFNGFSELAL TVFKLPVFFK
0601: QRDLLFYPAW AYTIPSWILK IPITFVEVGG YVFITYYVMG FDPNVGRFFK QYLLMLAINQ MAASLFRFIG GAARNMIVAN VFASFMLLIF MVLGGFILVR
0701: EKVKKWWIWG YWISPLMYAQ NAISVNEFFG HSWDKVLNST ASNETLGVQV LKYRGVFPEA KWYWIGLGAM LGYTLLFNAL FTLALTYLKA YGNSRSSVSE
0801: DELKEKHANL NGEVLDNDHL ESPSNDGPTG MNSGNDSAIV EENSSPIQRG MVLPFLPLSL TFDNIRYSVD MPPEMKAQGV VEDRLELLKG VSGSFRPGVL
0901: TALMGVSGAG KTTLMDVLAG RKTGGYIQGN ISISGYPKKQ ETFARVSGYC EQNDIHSPQV TVYESLLFSA WLRLPEDVDS NKRRMFIEEV MELVELKPLK
1001: DALVGLPGVN GLSTEQRKRL TIAVELVANP SIIFMDEPTS GLDARAAAIV MRTVRNTVDT GRTVVCTIHQ PSIDIFEAFD ELFLMKRGGE EIYAGPLGHH
1101: SADLINYYEG IHGVRKIKDG YNPATWMLEV TTIGQEQMLG VDFSDIYKKS ELYQRNKALI KELSQPAPGS TDLYFPTQYS QSSITQCMAC LWKQNLSYWR
1201: NPPYNAVRFL FTTVIALLFG TIFWDLGGKM SQSQDLFNAM GSMYAAVLFI GIMNCTSVQP VVAVERTVFY RERAAGMYSA FPYAFGQVVI ELPYTLAQAT
1301: VYGVIVYSMI GFEWTAAKFF WYLFFMYFTL LYFTFYGMMA VGLTPNYHIA SIVSSAFYAI WNLFSGFIIP RPKVPIWWRW YCWVCPVAWT LYGLVVSQFG
1401: DVMTPMDDGT LVKDFIEGYF DFKHSWLGYV AMVVVAFAVL FAFLFGFAIM KLNFQKR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.