Factsheet for PGSC0003DMT400076209

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076208	Potato	plastid	82.9	82.5
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	70.55	81.2
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	79.06	78.95
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	74.11	74.74
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	7.82	73.68
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	58.55	73.53
KRH09797	Soybean	endoplasmic reticulum	72.99	73.3
KRH23522	Soybean	mitochondrion	72.92	73.28
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	31.89	73.12
VIT_09s0002g05560.t01	Wine grape	plasma membrane	73.06	72.01
KRH47506	Soybean	endoplasmic reticulum	71.53	71.88
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	69.99	70.98
CDY39660	Canola	cytosol, nucleus, plasma membrane	69.99	70.88
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	69.85	70.84
AT1G15520.1	Thale cress	plastid	70.2	70.7
Os01t0609300-01	Rice	plasma membrane	63.29	70.15
GSMUA_Achr9P02950_001	Banana	plasma membrane	67.62	69.76
GSMUA_Achr6P34530_001	Banana	plasma membrane	63.99	69.52
KRH67471	Soybean	endoplasmic reticulum	69.43	68.86
EES03260	Sorghum	plasma membrane	60.85	68.12
KRG95762	Soybean	mitochondrion	67.69	67.83
Zm00001d011315_P002	Maize	plasma membrane	68.25	67.73
Os01t0609900-02	Rice	plasma membrane	65.46	67.58
TraesCS3B01G248400.1	Wheat	cytosol, peroxisome, plasma membrane	68.39	67.4
TraesCS3D01G234400.1	Wheat	plasma membrane	68.32	67.33
HORVU3Hr1G053350.8	Barley	vacuole	68.39	67.26
EES03255	Sorghum	cytosol, peroxisome, plasma membrane, plastid	68.67	67.26
TraesCS3A01G217900.1	Wheat	cytosol	68.11	67.13
KXG32865	Sorghum	plasma membrane	68.18	67.01
KXG32863	Sorghum	cytosol, peroxisome, plasma membrane	67.76	66.92
HORVU3Hr1G071470.1	Barley	cytosol, mitochondrion, nucleus, plasma membrane	66.92	66.6
Os08t0384500-01	Rice	plasma membrane	35.38	66.45
TraesCS3A01G272800.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	66.71	66.39
TraesCS7B01G292700.1	Wheat	plasma membrane	66.22	66.36
HORVU7Hr1G092510.2	Barley	plasma membrane	66.71	66.34
Os01t0609200-00	Rice	plasma membrane	67.76	66.33
TraesCS3A01G218000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	66.99	66.25
TraesCS7D01G386600.1	Wheat	plasma membrane	66.78	66.23
TraesCS7A01G391100.1	Wheat	plasma membrane	66.64	66.18
Zm00001d044443_P001	Maize	cytosol, mitochondrion, nucleus, plasma membrane	66.85	66.16
TraesCS3D01G234300.2	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	66.85	66.11
TraesCS3B01G248500.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	66.78	66.05
KXG32860	Sorghum	plasma membrane	67.34	65.96
TraesCS3D01G272200.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	66.22	65.9
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	55.97	65.9
Zm00001d011319_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	67.2	65.82
TraesCS2A01G483300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	66.5	65.77
KRH47220	Soybean	plasma membrane	43.48	65.51
Os01t0342750-01	Rice	plasma membrane	32.03	65.48
KRH09795	Soybean	endoplasmic reticulum	69.09	65.48
HORVU7Hr1G092380.8	Barley	cytosol	66.09	65.45
GSMUA_Achr9P01490_001	Banana	plasma membrane	68.18	65.44
Os01t0609000-00	Rice	plasma membrane	66.99	65.4
TraesCS7A01G391000.1	Wheat	plasma membrane	66.02	65.15
TraesCS7D01G386500.1	Wheat	plasma membrane	65.95	65.08
HORVU3Hr1G053380.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	66.85	64.95
TraesCSU01G097600.2	Wheat	plasma membrane	65.74	64.88
TraesCS3B01G306400.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	66.5	64.57
TraesCS3B01G523700.1	Wheat	mitochondrion	47.8	64.02
EER98908	Sorghum	cytosol, nucleus, plasma membrane	65.25	64.0
EER98758	Sorghum	cytosol, nucleus, plasma membrane	64.41	63.7
TraesCS5D01G190600.1	Wheat	cytosol, nucleus, plasma membrane	64.2	63.54
HORVU5Hr1G056280.6	Barley	cytosol, nucleus, plasma membrane	64.13	63.38
TraesCS3B01G524400.1	Wheat	cytosol, peroxisome, plasma membrane	63.57	63.35
TraesCS5B01G183500.1	Wheat	cytosol, nucleus, plasma membrane	63.99	63.33
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	69.71	63.23
TraesCS2B01G149900.1	Wheat	cytosol, peroxisome, plasma membrane	54.78	63.2
TraesCS3D01G474700.1	Wheat	cytosol, nucleus, plasma membrane	63.64	63.11
TraesCS3A01G479800.1	Wheat	cytosol, nucleus, plasma membrane	63.5	62.98
HORVU3Hr1G105140.4	Barley	cytosol, peroxisome, plasma membrane	63.5	62.93
TraesCS5A01G185500.1	Wheat	cytosol, nucleus, plasma membrane	60.99	62.61
Zm00001d044442_P036	Maize	plasma membrane	68.32	62.2
TraesCS2D01G130000.1	Wheat	cytosol, peroxisome, plasma membrane	61.48	61.57
KXG20401	Sorghum	plasma membrane	61.97	61.24
PGSC0003DMT400068277	Potato	cytosol	56.8	60.93
Os09t0333000-00	Rice	plasma membrane	34.47	60.84
PGSC0003DMT400050158	Potato	cytosol, peroxisome, plasma membrane	61.34	60.79
PGSC0003DMT400060396	Potato	plastid	62.25	60.35
PGSC0003DMT400050166	Potato	plastid	58.41	60.13
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	67.2	59.78
PGSC0003DMT400006729	Potato	plastid	60.64	57.93
Os09t0332300-00	Rice	plasma membrane	33.22	57.63
PGSC0003DMT400060117	Potato	cytosol	40.27	56.85
PGSC0003DMT400067210	Potato	plasma membrane	55.76	56.79
TraesCS2A01G127800.1	Wheat	cytosol, peroxisome, plasma membrane	31.05	56.54
TraesCS6A01G107100.1	Wheat	mitochondrion, plasma membrane	49.2	56.04
TraesCS6D01G094800.1	Wheat	plasma membrane	36.08	55.83
Os01t0516900-00	Rice	plasma membrane	25.96	52.99
PGSC0003DMT400046986	Potato	plasma membrane	32.03	51.57

Protein Annotations

EntrezGene:102584338	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	ProteinID:AAN85370	ProteinID:AAN85370.1
InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	EMBL:AY165019
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	UniProt:M1CWC9
InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510
EnsemblPlantsGene:PGSC0003DMG402029631	PGSC:PGSC0003DMG402029631	EnsemblPlants:PGSC0003DMT400076209	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF444
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000296B7E1	RefSeq:XP_006360348.1	SEG:seg

Description

Pleiotropic drug resistance protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG402029631]

Coordinates

chr9:+:58544368..58551696

Molecular Weight (calculated)

161627.0 Da

IEP (calculated)

6.290

GRAVY (calculated)

0.017

Length

1433 amino acids

Sequence
(BLAST)

0001: MEPSDLSNLR GRSIRGSMRG SMRENSNSIW RNNGVEVFSR SNRDEDDEEA LKWAALEKLP TYDRLRKGIL FGSQGVAAEV DVDDLGVQQR KNLLERLVKV
0101: ADEDNEKFLL KLKNRIDRVG IDFPSIEVRF EHLNIEADAY VGSRALPTFT NFISNFIESL LDSIHIFPSK KRSVTILKDV SGYVKPCRMT LLLGPPGSGK
0201: TTLLLALAGK LDSDLRVTGK VTYNGHELHE FVPERTAAYI SQHDLHIGEM TVRETLEFSA RCQGVGSRYE MLAELSRREK AANIKPDVDI DMFMKAVSTE
0301: GQESKVITDY VLKILGLDIC ADTMVGDQMI RGISGGQKKR VTTGEMIVGP SKALFMDEIS TGLDSSTTYS IVNSLKQSVQ ILKGTALISL LQPAPETYNL
0401: FDDIILLSDG YIVYQGPRED VLEFFESMGF KCPDRKGVAD FLQEVTSKKD QQQYWVRRDE PYRFITSKEF AEAYQSFHVG RKVSNELSTA FDKSKSHPAA
0501: LTTEKYGIGK KQLLKVCTER EFLLMQRNSF VYIFKFFQLM VIALMTMTIF FRTEMPRDTE TDGGIYTGAL FFTVVMLMFN GLSELPLTLY KLPVFYKQRD
0601: FLFYPSWAYA IPSWILKIPV TLLEVGMWTV LTYYVIGFDP NVGRFFKQFL LLVLVNQMAS GLFRFIAAVG RTMGVASTFG ACALLLQFAL GGFALARTDV
0701: KDWWIWGYWT SPLMFSVNAI LVNEFDGEKW KHTAPNGTEP LGPSVVRSRG FFPDAYWYWI GIGALAGFTI LFNIAYSLAL AYLNPFGKPQ ATISEEGENN
0801: ESSGSSPQIT STAEGDSVGE NQNKKKGMVL PFEPQSITFD EVVYSVDMPP EMREQGSSDN RLVLLKGVSG AFRPGVLTAL MGVSGAGKTT LMDVLAGRKT
0901: GGYIDGSIKI SGYPKKQETF ARISGYCEQN DIHSPYVTVY ESLVYSAWLR LPQDVDEHKR MMFVEEVMDL VELTPLRSAL VGLPGVNGLS TEQRKRLTIA
1001: VELVANPSII FMDEPTSGLD ARAAAIVMRA VRNTVDTGRT VVCTIHQPSI DIFEAFDELF LMKRGGQEIY VGPLGRESCH LIKYFESMPG VGKIEEGYNP
1101: ATWMLEVTSS SQEMSLGVDF TDLYKNSDLC RRNKALITEL SVPRPGTSDL HFENQFSQPF WVQCMACLWK QRWSYWRNPA YTAVRFLFTT FIALIFGSMF
1201: WDLGTKVSRP QDLTNAMGSM YAAVLFLGVQ NASSVQPVVS VERTVFYREK AAGMYSAIPY AFAQVFIEIP YVFVQSVVYG LIVYSMIGFE WTVAKFFWYF
1301: FFMFFTFLYF TFFGMMTVAI TPNQNVASIV AGFFYTVWNL FSGFIVPRPR IPIWWRWYYW GCPVAWTLYG LVASQFGDLQ DIVNGQTVEE YLRNDYGIKH
1401: DFLGVVAGVI VAFAVVFAFT FALGIKAFNF QKR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.