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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, nucleus, cytosol

Predictor Summary:
  • cytosol 1
  • mitochondrion 2
  • plasma membrane 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G272800.2 Wheat cytosol, mitochondrion, nucleus, plasma membrane 96.14 98.54
TraesCS3D01G272200.2 Wheat cytosol, mitochondrion, nucleus, plasma membrane 95.87 98.26
HORVU3Hr1G071470.1 Barley cytosol, mitochondrion, nucleus, plasma membrane 93.29 95.62
Os01t0342750-01 Rice plasma membrane 40.38 85.02
EES03260 Sorghum plasma membrane 71.41 82.34
TraesCS3B01G248500.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 80.56 82.06
Zm00001d044443_P001 Maize cytosol, mitochondrion, nucleus, plasma membrane 79.61 81.15
Zm00001d011319_P003 Maize cytosol, mitochondrion, peroxisome, plasma membrane 79.88 80.59
GSMUA_Achr1P14530_001 Banana mitochondrion, plasma membrane 57.93 74.93
GSMUA_Achr9P02950_001 Banana plasma membrane 67.82 72.07
PGSC0003DMT400005785 Potato cytosol, peroxisome, plasma membrane 30.35 71.68
TraesCS3B01G248400.1 Wheat cytosol, peroxisome, plasma membrane 70.26 71.32
Solyc12g019640.1.1 Tomato plasma membrane 29.0 70.39
GSMUA_Achr6P34530_001 Banana plasma membrane 62.47 69.9
VIT_09s0002g05370.t01 Wine grape mitochondrion, plasma membrane 66.67 69.25
TraesCS7B01G292700.1 Wheat plasma membrane 66.6 68.74
TraesCS3B01G523700.1 Wheat mitochondrion 49.25 67.94
PGSC0003DMT400034130 Potato cytosol, mitochondrion, peroxisome, plasma membrane, plastid 56.91 67.47
KRH23522 Soybean mitochondrion 65.04 67.32
TraesCS5B01G183500.1 Wheat cytosol, nucleus, plasma membrane 65.92 67.2
Solyc08g067620.2.1 Tomato nucleus 66.06 67.1
VIT_09s0002g05560.t01 Wine grape plasma membrane 65.92 66.92
KRH47506 Soybean endoplasmic reticulum 64.63 66.9
Solyc05g053590.2.1 Tomato cytosol, mitochondrion, peroxisome, plasma membrane 63.96 66.86
Solyc12g098210.1.1 Tomato plastid 64.3 66.6
KRH52503 Soybean cytosol, peroxisome, plasma membrane 65.31 66.57
KRH09797 Soybean endoplasmic reticulum 64.36 66.57
TraesCS3B01G524400.1 Wheat cytosol, peroxisome, plasma membrane 64.84 66.55
CDY36570 Canola cytosol, nucleus, plasma membrane, plastid 63.69 66.53
Bra026124.1-P Field mustard cytosol, nucleus, plasma membrane, plastid 63.69 66.53
PGSC0003DMT400076209 Potato plasma membrane 64.57 66.5
PGSC0003DMT400076208 Potato plastid 64.84 66.46
CDY39660 Canola cytosol, nucleus, plasma membrane 63.62 66.36
KRH61824 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 65.04 66.25
Solyc09g091660.2.1 Tomato plastid 64.63 66.25
PGSC0003DMT400061280 Potato cytosol, nucleus, plasma membrane, plastid 64.16 65.99
AT1G15520.1 Thale cress plastid 63.41 65.78
VIT_04s0008g04790.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 63.96 65.74
TraesCS2B01G149900.1 Wheat cytosol, peroxisome, plasma membrane 55.28 65.7
Solyc12g100180.1.1 Tomato mitochondrion, nucleus, plasma membrane, plastid 63.62 65.44
TraesCS6B01G205900.1 Wheat plasma membrane 63.75 65.17
KRH16029 Soybean cytosol 63.75 65.03
PGSC0003DMT400048449 Potato cytosol, peroxisome, plasma membrane 53.46 64.83
KRH67471 Soybean endoplasmic reticulum 63.35 64.71
KRH05088 Soybean endoplasmic reticulum 63.14 64.41
KRG95762 Soybean mitochondrion 62.33 64.34
PGSC0003DMT400043433 Potato endoplasmic reticulum, plasma membrane 6.5 63.16
KRH47220 Soybean plasma membrane 39.97 62.04
KRH09795 Soybean endoplasmic reticulum 63.55 62.04
TraesCS7B01G271500.1 Wheat cytosol 25.68 61.73
PGSC0003DMT400005783 Potato cytosol, peroxisome, plasma membrane 64.91 60.63
TraesCS3B01G141700.2 Wheat golgi, unclear 56.03 57.79
KRG95752 Soybean cytosol, peroxisome, plasma membrane 61.45 56.3
Solyc12g019620.1.1 Tomato cytosol, nucleus, plasma membrane 31.84 56.15
TraesCS5B01G572600.1 Wheat plastid 55.08 55.95
TraesCS5B01G449500.1 Wheat plastid 54.95 55.82
TraesCS7B01G000200.1 Wheat plastid 54.95 55.66
TraesCS7B01G088800.1 Wheat plastid 54.0 54.93
TraesCS2B01G606700.2 Wheat plastid 54.27 54.79
TraesCS7B01G167100.1 Wheat cytosol, nucleus, plasma membrane 46.54 50.89
TraesCS4B01G054700.1 Wheat cytosol, peroxisome, plasma membrane 48.51 49.86
TraesCS5B01G155400.3 Wheat plasma membrane 47.9 49.44
TraesCS4B01G332300.3 Wheat cytosol, nucleus, plasma membrane 45.05 49.41
TraesCS7B01G381200.2 Wheat plasma membrane 47.15 48.91
TraesCS5B01G517700.1 Wheat plasma membrane 31.91 48.81
TraesCS4B01G331400.3 Wheat plasma membrane 32.99 48.75
TraesCS7B01G381000.1 Wheat cytosol, nucleus, plasma membrane 45.6 48.45
TraesCS7B01G005200.1 Wheat plasma membrane 42.41 47.39
VIT_04s0008g04840.t01 Wine grape plasma membrane 35.43 46.74
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABCG_PDR_1InterPro:ABCG_PDR_2InterPro:ABC_2_trans
InterPro:ABC_trans_NInterPro:ABC_transporter-likeGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016787GO:GO:0016887InterPro:IPR003439
InterPro:P-loop_NTPaseInterPro:PDR_assocPFAM:PF00005PFAM:PF01061PFAM:PF08370PFAM:PF14510
PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF264SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3B01G306400EnsemblPlants:TraesCS3B01G306400.2TIGR:cd03232TIGR:cd03233SEG:seg:
Description
No Description!
Coordinates
chr3B:-:492203363..492215965
Molecular Weight (calculated)
167048.0 Da
IEP (calculated)
6.844
GRAVY (calculated)
0.039
Length
1476 amino acids
Sequence
(BLAST)
0001: MSREIHKIAS LRRDSWRSSD DVFSRSSSRF QDEEDDEEAL RWAALERLPT YDRVRRGILQ AETGEKIDVD VGRLGARESR ALIDRLVRAA DDDHERFLLK
0101: LKDRMDRVGI DYPTIEVRFE KLEVEAEVLV GNRALPTLVN SVRNTLEAIG HALHIFPRRK HSMTILHDVS GIIKPRRMTL LLGPPGSGKT TLLLALAGKL
0201: DKELKVSGKV SYNGYEMNEF VPERTAAYIS QHDLHTGEMT VRETLAFSAR CQGVGSRYEM LTELARRENT ENIKPDNDID VYMKASAMGG QEYNVVTEYI
0301: LKVQHAVVDL MLEIEGSFLL GYFLLNQLTV CYYVTNPQVL GLDICADTVV GNDMLRGISG GQRKRVTTGE MLVGPARALF MDEISTGLDS STTYQIVNSI
0401: RQTIHVLGGT AVISLLQPAP ETYNLFDDII LLSDGYVVYQ GAREHVLEFF ESMGFRCPQR KGVADFLQEV TSRKDQEQYW YRSDMPYHFV PVKQFADSFH
0501: SFHIGQFVHN ELLEPFDRTK SHPAALATSK FGVSRIELLK ATMDREFLLM KRNSFYFIFK AAQLSLMAFL AMSTFFRTNM HRDPTYGTIY MGALYFAIDA
0601: IMFNGFSELG MTATKLPVFF KQRDLLFFPA WAYTLPAWIL QIPITLFEVG VYVFTTYYVI GFDPSVSRLF KQYILLLALN QMSSSLFRFI AGLGRDMVVS
0701: STFGPLALAS FTILGGFILA RPDVKKWWIW GYWVSPLSYA QNAISTNEFL GHSWNKILPG QNDTMGIMVL KSRGIFTEAK WYWIGFGAMI GYTLLFNLLY
0801: TLALSVLNPL GDTHPTMPEN AIKEKHANVT GEILENPEKK KCRNLELSGS TNQNCATSNV DSSSRRKGMV LPFAQLSLSF NAVKYSVDMP QAMSAQGVTD
0901: DCLVLLKGVS GSFRPGVLTA LMGVSGAGKT TLMDVLAGRK TGGYIEGDIT ISGYPKKQET FARISGYCEQ NDIHSPHVTV YESLAFSAWL RLPSEVDLVT
1001: RKMFIEEVME LVELTSLRGA LVGLPGVNGL STEQRKRLTI AVELVANPSI IFMDEPTSGL DARAAAIVMR AVRNTVNTGR TVVCTIHQPS IDIFEAFDEL
1101: FLMKRGGEEI YVGPLGHNSS KLIEYFEGIE GVSKIKDGYN PATWMLEVTS IVQEEMLSVD FCEIYRRSEL YQRNKELIEE LSTPHPDSSD LDFPSLYSRS
1201: FFTQCLACLW KQKLSYWRNP SYTAMRFLFT VIIALLFGTM FWGLGQKTKR EQDLFNAVGS MYAAVLYLGI QNSGTVQPVV AVERTVFYRE RAAGMYSAFP
1301: YAFGQVAIEF PYILVQTVIY GVLVYSMIGF EWSVAKFFWY LYFMYFTLLY FTFYGMTAVG LTPNESVAAI ISGAVYTAWN LFSGYLIPRP KIPVWWRWYS
1401: WICPVAWTLY GLVASQFGDI QTKLVTKDQT VAQFIAEFYG FDRDLLWVVA LVHVAFTVGF AFMFNFAIMR FNFQRR
Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.