Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0544400-01 | Rice | plasma membrane | 38.74 | 81.47 |
| TraesCS5B01G517700.1 | Wheat | plasma membrane | 73.87 | 76.48 |
| TraesCS5A01G502800.1 | Wheat | cytosol, nucleus, plasma membrane | 91.69 | 68.0 |
| OQU80771 | Sorghum | plasma membrane | 79.28 | 67.46 |
| HORVU4Hr1G081040.4 | Barley | cytosol, nucleus, plasma membrane | 89.39 | 66.25 |
| TraesCS7B01G167100.1 | Wheat | cytosol, nucleus, plasma membrane | 86.29 | 63.85 |
| TraesCS4B01G332300.3 | Wheat | cytosol, nucleus, plasma membrane | 80.28 | 59.58 |
| Zm00001d052726_P008 | Maize | cytosol, nucleus, plasma membrane | 77.98 | 56.9 |
| Zm00001d031724_P003 | Maize | plasma membrane | 78.88 | 56.45 |
| TraesCS7B01G271500.1 | Wheat | cytosol | 33.83 | 55.05 |
| TraesCS7B01G005200.1 | Wheat | plasma membrane | 65.27 | 49.36 |
| GSMUA_Achr1P08030_001 | Banana | plasma membrane | 60.46 | 46.5 |
| GSMUA_Achr1P08050_001 | Banana | cytosol, peroxisome, plasma membrane | 59.06 | 45.38 |
| TraesCS3B01G523700.1 | Wheat | mitochondrion | 46.45 | 43.36 |
| TraesCS2B01G149900.1 | Wheat | cytosol, peroxisome, plasma membrane | 50.35 | 40.5 |
| Os01t0724500-01 | Rice | plasma membrane | 7.61 | 37.07 |
| TraesCS5B01G572600.1 | Wheat | plastid | 51.35 | 35.31 |
| TraesCS5B01G183500.1 | Wheat | cytosol, nucleus, plasma membrane | 51.15 | 35.29 |
| TraesCS7B01G000200.1 | Wheat | plastid | 51.05 | 35.0 |
| TraesCS3B01G524400.1 | Wheat | cytosol, peroxisome, plasma membrane | 50.35 | 34.98 |
| TraesCS7B01G088800.1 | Wheat | plastid | 50.55 | 34.8 |
| TraesCS5B01G449500.1 | Wheat | plastid | 50.55 | 34.76 |
| TraesCS2B01G606700.2 | Wheat | plastid | 50.65 | 34.61 |
| TraesCS7B01G292700.1 | Wheat | plasma membrane | 49.35 | 34.48 |
| TraesCS3B01G248500.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 49.75 | 34.3 |
| TraesCS3B01G141700.2 | Wheat | golgi, unclear | 48.85 | 34.1 |
| TraesCS6B01G205900.1 | Wheat | plasma membrane | 49.25 | 34.07 |
| TraesCS3B01G248400.1 | Wheat | cytosol, peroxisome, plasma membrane | 49.25 | 33.84 |
| TraesCS3B01G306400.2 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 48.75 | 32.99 |
| TraesCS7B01G381000.1 | Wheat | cytosol, nucleus, plasma membrane | 44.84 | 32.25 |
| TraesCS4B01G054700.1 | Wheat | cytosol, peroxisome, plasma membrane | 45.25 | 31.48 |
| TraesCS7B01G381200.2 | Wheat | plasma membrane | 44.64 | 31.34 |
| TraesCS5B01G155400.3 | Wheat | plasma membrane | 44.64 | 31.19 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans | InterPro:ABC_transporter-like |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 | InterPro:P-loop_NTPase | InterPro:PDR_assoc |
| PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF214 |
| SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4B01G331400 | EnsemblPlants:TraesCS4B01G331400.3 | TIGR:cd03232 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:621945004..621951360
Molecular Weight (calculated)
114908.0 Da
IEP (calculated)
9.230
GRAVY (calculated)
0.210
Length
999 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFKCPDRKN VADFLQEVTS KMDQKQYWIG DENKYQYWPI KKFSESFRSS YHPQLVEDSL YMPNNMGKHK EIKKSATRSI SRWNIFKACF LREVLFLKRN
101: SPLHIFKTIQ IVILAFVIST VFLRTNMKHK NVLDANKYMG SLFIAIVIVN INGMTEIAMT IKRLPTFYKQ RELLALPGWA LLCSIFLISI PMSLVETCLW
201: TSLTYYVIGY APSFLRFIQQ FLVLFATHQM SMGLYRFLAA IGRTQVMANM LSTTALIAMY IFGGFVISKD NLQPWLQWDW ISPFTYAQNA VALNEFLDER
301: WATEFYYANA NTVGEAILKI RGLLTKWHWY WICVIILFGF SMVFNILTIF ALEFMKSPHK HQVNASATKL KMDCKNHKIG TSNTSTSKLV LLFQPLSIFF
401: DHINYFVDMP KEMIKNGVLE KKLQLLQDVS GVFRPGVLTA LMGITGAGKT TLLDVLAGRK TGGYIEGTIR IEGYPKKQET FSRISGYCEQ NDIHSPNMTV
501: HESLQFSAWL RLPANVKSHE RDIFIDEVMD LVELTGLKNA MVGMAGVTGL SAEQRKRLTI AVELVASPSI IFMDEPTTGL DARAAAIVMR TIRKTVDTGR
601: TVVCTIHQPS IGIFESFDEL LLMKRGGQII YSGSLGPLSS NMINYFEGIP SVPRIKEGQN PASWVLDISS PTTEYDIGVD YAEIYRSSYL YRDNMNLITE
701: LGHPKPNMED LYFPRGYWQN FMTQYVACLW KQRCAYWKNV EHNGVRFLNT FVVSILFGVV FWKIGSTITQ QQDVFNILGV VYGSSLFLGF NNCTSLQPVV
801: VMERVVLYRE KAAGMYSTLA YTIAQMAIEL PYILVQVLVF ASIVYPMIGF QMTTVKFFWF VLYMMLSFMY YTLYGMMTVA LTPNLEMAAG LSFLIYVFWN
901: VFSGFIIGRE LIPIWWRWVY WANPAAWTVY GLMFSQLGDR MELIRVPGQP DQTVREFLEG YLGLEARYFH LITYLHLVVI ALFAFLFFIF VKHLKFEQR
101: SPLHIFKTIQ IVILAFVIST VFLRTNMKHK NVLDANKYMG SLFIAIVIVN INGMTEIAMT IKRLPTFYKQ RELLALPGWA LLCSIFLISI PMSLVETCLW
201: TSLTYYVIGY APSFLRFIQQ FLVLFATHQM SMGLYRFLAA IGRTQVMANM LSTTALIAMY IFGGFVISKD NLQPWLQWDW ISPFTYAQNA VALNEFLDER
301: WATEFYYANA NTVGEAILKI RGLLTKWHWY WICVIILFGF SMVFNILTIF ALEFMKSPHK HQVNASATKL KMDCKNHKIG TSNTSTSKLV LLFQPLSIFF
401: DHINYFVDMP KEMIKNGVLE KKLQLLQDVS GVFRPGVLTA LMGITGAGKT TLLDVLAGRK TGGYIEGTIR IEGYPKKQET FSRISGYCEQ NDIHSPNMTV
501: HESLQFSAWL RLPANVKSHE RDIFIDEVMD LVELTGLKNA MVGMAGVTGL SAEQRKRLTI AVELVASPSI IFMDEPTTGL DARAAAIVMR TIRKTVDTGR
601: TVVCTIHQPS IGIFESFDEL LLMKRGGQII YSGSLGPLSS NMINYFEGIP SVPRIKEGQN PASWVLDISS PTTEYDIGVD YAEIYRSSYL YRDNMNLITE
701: LGHPKPNMED LYFPRGYWQN FMTQYVACLW KQRCAYWKNV EHNGVRFLNT FVVSILFGVV FWKIGSTITQ QQDVFNILGV VYGSSLFLGF NNCTSLQPVV
801: VMERVVLYRE KAAGMYSTLA YTIAQMAIEL PYILVQVLVF ASIVYPMIGF QMTTVKFFWF VLYMMLSFMY YTLYGMMTVA LTPNLEMAAG LSFLIYVFWN
901: VFSGFIIGRE LIPIWWRWVY WANPAAWTVY GLMFSQLGDR MELIRVPGQP DQTVREFLEG YLGLEARYFH LITYLHLVVI ALFAFLFFIF VKHLKFEQR
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.