Factsheet for TraesCS2B01G149900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G130000.1	Wheat	cytosol, peroxisome, plasma membrane	95.65	83.02
TraesCS3B01G523700.1	Wheat	mitochondrion	68.68	79.72
TraesCS5B01G183500.1	Wheat	cytosol, nucleus, plasma membrane	88.81	76.17
Os09t0333000-00	Rice	plasma membrane	49.6	75.86
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	66.83	72.74
EER98758	Sorghum	cytosol, nucleus, plasma membrane	82.93	71.08
Os09t0332300-00	Rice	plasma membrane	47.02	70.7
TraesCS3B01G524400.1	Wheat	cytosol, peroxisome, plasma membrane	81.56	70.45
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	34.62	68.8
TraesCS2A01G127800.1	Wheat	cytosol, peroxisome, plasma membrane	43.24	68.23
Solyc12g019640.1.1	Tomato	plasma membrane	33.17	67.76
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	61.27	62.53
TraesCS7B01G271500.1	Wheat	cytosol	30.11	60.91
GSMUA_Achr9P02950_001	Banana	plasma membrane	66.43	59.4
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	7.25	59.21
GSMUA_Achr6P34530_001	Banana	plasma membrane	62.64	58.98
KRH47220	Soybean	plasma membrane	44.85	58.57
TraesCS3B01G248400.1	Wheat	cytosol, peroxisome, plasma membrane	68.52	58.53
TraesCS3B01G248500.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	66.99	57.42
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	65.3	57.07
VIT_04s0008g04790.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	65.86	56.96
KRH61824	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	66.26	56.8
KRH47506	Soybean	endoplasmic reticulum	65.14	56.73
KRH52503	Soybean	cytosol, peroxisome, plasma membrane	66.02	56.63
TraesCS7B01G292700.1	Wheat	plasma membrane	64.65	56.15
KRH23522	Soybean	mitochondrion	64.41	56.1
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	63.53	55.88
KRH09797	Soybean	endoplasmic reticulum	64.09	55.78
VIT_09s0002g05560.t01	Wine grape	plasma membrane	64.81	55.36
TraesCS3B01G306400.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	65.7	55.28
Solyc08g067620.2.1	Tomato	nucleus	64.65	55.27
KRH16029	Soybean	cytosol	64.33	55.22
PGSC0003DMT400076208	Potato	plastid	63.93	55.14
KRH05088	Soybean	endoplasmic reticulum	64.09	55.01
Solyc09g091660.2.1	Tomato	plastid	63.77	55.0
Solyc12g098210.1.1	Tomato	plastid	63.04	54.95
PGSC0003DMT400076209	Potato	plasma membrane	63.2	54.78
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	63.28	54.77
CDY39660	Canola	cytosol, nucleus, plasma membrane	62.32	54.7
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	62.16	54.64
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	62.16	54.64
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	54.67	54.54
KRH67471	Soybean	endoplasmic reticulum	63.37	54.46
TraesCS6B01G205900.1	Wheat	plasma membrane	63.2	54.36
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	62.8	54.36
AT1G15520.1	Thale cress	plastid	62.16	54.25
KRG95762	Soybean	mitochondrion	62.4	54.2
KRH09795	Soybean	endoplasmic reticulum	63.45	52.12
TraesCS4B01G331400.3	Wheat	plasma membrane	40.5	50.35
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	63.85	50.19
TraesCS5B01G517700.1	Wheat	plasma membrane	37.92	48.81
TraesCS3B01G141700.2	Wheat	golgi, unclear	55.96	48.57
TraesCS5B01G572600.1	Wheat	plastid	55.96	47.83
TraesCS7B01G088800.1	Wheat	plastid	55.88	47.83
TraesCS7B01G000200.1	Wheat	plastid	55.88	47.63
TraesCS5B01G449500.1	Wheat	plastid	55.64	47.56
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	61.67	47.55
TraesCS2B01G606700.2	Wheat	plastid	55.72	47.33
TraesCS7B01G167100.1	Wheat	cytosol, nucleus, plasma membrane	48.71	44.81
TraesCS4B01G332300.3	Wheat	cytosol, nucleus, plasma membrane	46.54	42.94
Solyc12g019620.1.1	Tomato	cytosol, nucleus, plasma membrane	28.74	42.65
VIT_04s0008g04840.t01	Wine grape	plasma membrane	38.24	42.45
TraesCS7B01G381000.1	Wheat	cytosol, nucleus, plasma membrane	47.42	42.4
TraesCS7B01G005200.1	Wheat	plasma membrane	44.93	42.24
TraesCS7B01G381200.2	Wheat	plasma membrane	48.39	42.23
TraesCS4B01G054700.1	Wheat	cytosol, peroxisome, plasma membrane	48.79	42.2
TraesCS5B01G155400.3	Wheat	plasma membrane	48.39	42.03

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase	InterPro:PDR_assoc
PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF306
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2B01G149900	EnsemblPlants:TraesCS2B01G149900.1	TIGR:cd03232
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:116337158..116347705

Molecular Weight (calculated)

140867.0 Da

IEP (calculated)

7.236

GRAVY (calculated)

0.082

Length

1242 amino acids

Sequence
(BLAST)

0001: MTGDLTYNGH TMDEFVPRRS AAYVSQHDMH MAELTVRETV NFSAKCQGIG HRFDMLMELS RREKEEHIKP DPEIDIYMKA AATGDQKAEV VTNHILKVLG
0101: LDICADIMIG NNMLRGISGG QKKRVTTAEM LVTPGRALFM DEISTGLDSS TTFQIVNSIQ QTIHIIGGTA VIALLQPAPE TYELFDDIIL LSDGHVVYNG
0201: PRKYVLEFFE IMGFKCPKRK GVADFLQEVT SIKDQGQYWI NNDETYRFVP VKEFAEAFQS FHVGQAIRSE LDVPFDKDKS HPTALKKSQY GASMKELLKA
0301: NINREILLMK RNSFVYIFKA TQLTLLAIIA MTVFLRINMH RDSVTDGRIY MGAIFFGILM IMFNGFAEVG LTTVKLPVFF KQRDLLFFPA WTYSLTSWII
0401: KTPLSLLNAT IWVGITYYGI GFDPNIQRFF RQLLLLFLVN EAFSGLFRFI AGLARQHVIA NTIASSCMLI FMLTGGFVMA RDNVKNLWIW GYWISPLMYA
0501: QNALSVNEFL GHSWNKTNPS FKGPLGRLVL ESQGIFPDTK WYWIGVGALL GYVLLFNILY SVCLTFLDSF DNNQPTVSEE TLKIKQANLI GELLEASSRR
0601: WVNNSTMASR DTADESNDKS NSNHTTVSSS PCKKGMVLHF VPLSITFDDI KYSVDMPEEI KEQGVAESRL ELLKGVSGSF RPGVLTALMG VSGAGKTTLM
0701: DVLVGRKTTG YIEGNITISG YPKKQETFAR VSGYCEQNDI HSPNVTVYES LAFSAWLRLP ANVESSTRKM FIDEVMELVE LNPLKNALVG LPGVSGLSTE
0801: QRKRLTIAVE LVANPSIIFM DEPTSGLDAR AAAIVMRAIR NTVDTGRTVV CTIHQPSIDI FESFDELFLM KRGGEEIYVG PLGRHSCELI RYLEAIENIS
0901: KIKDGHNPAT WMLEVTSTTQ EHITGINFSH VYKNSELYRR NKKLIKELST PTEGSSDLSF PTQYSQTFIT QSFACLWKQS LSYWRNPPYT LVKYFYTIIL
1001: ALLFGTMFWG IGRKRHNQQD LFSAMGSMYS TILFMGVQNS TSVQPVVAVE RTVFYRESAA RMYSPLPYAL GQVVIELPYI LVQSLIYGIL VYAMIGFEWT
1101: VAKFFWYMFF MYFTLAYFTF YGMMSMGLTS NYNVASIAST AFFALWNLFS GFIIPRTRIP IWWRWYYWLN PIAWTLNGLV TSQYGDVTEE FDNGVRVSDF
1201: VESYFGYHQD FLWVVANVVV LFAVLFAFLF GLSVKLFNFE KR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.