Factsheet for PGSC0003DMT400034130

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, mitochondrion, plastid, cytosol, plasma membrane

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	97.11	85.62
PGSC0003DMT400076208	Potato	plastid	83.05	71.81
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	81.61	70.8
PGSC0003DMT400076209	Potato	plasma membrane	81.2	70.55
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	74.3	65.09
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	58.96	64.33
KRH09797	Soybean	endoplasmic reticulum	73.49	64.12
KRH23522	Soybean	mitochondrion	73.25	63.96
KRH47506	Soybean	endoplasmic reticulum	72.85	63.6
VIT_09s0002g05560.t01	Wine grape	plasma membrane	73.49	62.93
GSMUA_Achr9P02950_001	Banana	plasma membrane	69.72	62.49
Os01t0609300-01	Rice	plasma membrane	64.5	62.1
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	70.2	61.85
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	70.2	61.85
AT1G15520.1	Thale cress	plastid	70.68	61.84
CDY39660	Canola	cytosol, nucleus, plasma membrane	70.2	61.77
GSMUA_Achr6P34530_001	Banana	plasma membrane	65.22	61.56
KRH47220	Soybean	plasma membrane	46.83	61.3
TraesCS3B01G248400.1	Wheat	cytosol, peroxisome, plasma membrane	70.68	60.52
Zm00001d011315_P002	Maize	plasma membrane	70.12	60.46
KRG95762	Soybean	mitochondrion	69.4	60.42
KRH67471	Soybean	endoplasmic reticulum	70.04	60.35
TraesCS3A01G217900.1	Wheat	cytosol	70.44	60.32
TraesCS3D01G234400.1	Wheat	plasma membrane	70.36	60.25
HORVU3Hr1G053350.8	Barley	vacuole	70.36	60.12
Os01t0609900-02	Rice	plasma membrane	66.83	59.94
KXG32865	Sorghum	plasma membrane	69.96	59.74
EES03260	Sorghum	plasma membrane	61.37	59.69
TraesCS7B01G292700.1	Wheat	plasma membrane	68.43	59.58
KXG32863	Sorghum	cytosol, peroxisome, plasma membrane	69.4	59.55
TraesCS7D01G386600.1	Wheat	plasma membrane	68.92	59.38
TraesCS7A01G391100.1	Wheat	plasma membrane	68.75	59.32
HORVU7Hr1G092510.2	Barley	plasma membrane	68.51	59.2
EES03255	Sorghum	cytosol, peroxisome, plasma membrane, plastid	69.32	58.99
TraesCS3A01G218000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	68.43	58.8
TraesCS3B01G523700.1	Wheat	mitochondrion	50.52	58.78
TraesCS3D01G234300.2	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	68.35	58.73
TraesCS3B01G248500.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	68.27	58.66
TraesCS7D01G386500.1	Wheat	plasma membrane	68.35	58.61
Os01t0609200-00	Rice	plasma membrane	68.92	58.61
TraesCS3A01G272800.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	67.63	58.47
TraesCS7A01G391000.1	Wheat	plasma membrane	68.19	58.47
TraesCSU01G097600.2	Wheat	plasma membrane	68.03	58.33
HORVU7Hr1G092380.8	Barley	cytosol	67.79	58.33
Zm00001d044443_P001	Maize	cytosol, mitochondrion, nucleus, plasma membrane	67.71	58.22
HORVU3Hr1G071470.1	Barley	cytosol, mitochondrion, nucleus, plasma membrane	67.31	58.19
TraesCS2A01G483300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	67.63	58.11
Os01t0609000-00	Rice	plasma membrane	68.51	58.11
GSMUA_Achr9P01490_001	Banana	plasma membrane	69.64	58.07
Zm00001d011319_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	68.19	58.03
TraesCS3D01G272200.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	66.99	57.92
TraesCS5A01G185500.1	Wheat	cytosol, nucleus, plasma membrane	64.82	57.81
KXG32860	Sorghum	plasma membrane	67.87	57.76
EER98908	Sorghum	cytosol, nucleus, plasma membrane	67.39	57.43
HORVU3Hr1G053380.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	67.95	57.36
KRH09795	Soybean	endoplasmic reticulum	69.32	57.08
TraesCS3B01G306400.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	67.47	56.91
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	55.26	56.53
EER98758	Sorghum	cytosol, nucleus, plasma membrane	65.7	56.45
TraesCS3B01G524400.1	Wheat	cytosol, peroxisome, plasma membrane	65.06	56.33
TraesCS3D01G474700.1	Wheat	cytosol, nucleus, plasma membrane	65.14	56.12
TraesCS3A01G479800.1	Wheat	cytosol, nucleus, plasma membrane	65.06	56.06
HORVU3Hr1G105140.4	Barley	cytosol, peroxisome, plasma membrane	64.98	55.95
TraesCS5D01G190600.1	Wheat	cytosol, nucleus, plasma membrane	64.9	55.8
TraesCS5B01G183500.1	Wheat	cytosol, nucleus, plasma membrane	64.82	55.73
HORVU5Hr1G056280.6	Barley	cytosol, nucleus, plasma membrane	64.9	55.72
Zm00001d044442_P036	Maize	plasma membrane	70.36	55.65
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	27.87	55.52
TraesCS2A01G127800.1	Wheat	cytosol, peroxisome, plasma membrane	35.02	55.4
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	70.2	55.32
PGSC0003DMT400060117	Potato	cytosol	45.06	55.27
Os08t0384500-01	Rice	plasma membrane	33.73	55.05
TraesCS2B01G149900.1	Wheat	cytosol, peroxisome, plasma membrane	54.54	54.67
KXG20401	Sorghum	plasma membrane	63.37	54.41
TraesCS2D01G130000.1	Wheat	cytosol, peroxisome, plasma membrane	62.41	54.3
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	69.0	53.32
PGSC0003DMT400050166	Potato	plastid	59.6	53.3
PGSC0003DMT400068277	Potato	cytosol	56.95	53.07
PGSC0003DMT400050158	Potato	cytosol, peroxisome, plasma membrane	61.04	52.56
Os01t0342750-01	Rice	plasma membrane	29.48	52.35
Os01t0516900-00	Rice	plasma membrane	29.4	52.14
PGSC0003DMT400060396	Potato	plastid	61.85	52.1
PGSC0003DMT400067210	Potato	plasma membrane	57.59	50.96
PGSC0003DMT400006729	Potato	plastid	61.04	50.67
Os09t0333000-00	Rice	plasma membrane	32.13	49.26
TraesCS6A01G107100.1	Wheat	mitochondrion, plasma membrane	48.51	48.01
Os09t0332300-00	Rice	plasma membrane	30.76	46.37
TraesCS6D01G094800.1	Wheat	plasma membrane	33.65	45.25
PGSC0003DMT400046986	Potato	plasma membrane	30.6	42.81
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	0.48	3.95

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_trans_N	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
InterPro:IPR003439	UniProt:M1B065	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061
PFAM:PF08370	PFAM:PF14510	EnsemblPlantsGene:PGSC0003DMG402013112	PGSC:PGSC0003DMG402013112	EnsemblPlants:PGSC0003DMT400034130	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF444	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00029607F9
SEG:seg	:	:	:	:	:

Description

Pleiotropic drug resistance protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG402013112]

Coordinates

chr5:-:48997815..49006779

Molecular Weight (calculated)

140326.0 Da

IEP (calculated)

7.994

GRAVY (calculated)

-0.037

Length

1245 amino acids

Sequence
(BLAST)

0001: MESANLSNFR GSLRASMRAD SSRSIFSRSG RDEDDEEALK WAALEKLPTF DRMRKGLLFG KEGETAAEVD TNDIGHQERK RLLDRLVKVA DEDNEKFLLK
0101: LKDRIQTVGI DLPSIEVRYE HLNIEADAYV GSRALPTFIN FMTNFVETFL NSIHILPSRK RQITILNDVS GMIKPSRMTL LLGPPSSGKT TLLLALAGKL
0201: DPTLKVTGNV TYNGHELHEF VPQKTAVYIS QYDLHIGEMT VRETLEFSAR CQGVGPRYEM LAELSRREKA ANIKPDRDID IYMKASVTKG QEANIVTDYV
0301: LKILGLDVCA DTMVGDEMLR GISGGQKKRV TTGEMLVGPS KALFMDEIST GLDSSTTFSI VNSLRQSVQL LKGTAVISLL QPAPETYNLF DDIILLSDAC
0401: IVYQGPREDV LDFFESMGFK CPERKGVADF LQEVTSKKDQ QQYWAKKDKP YRFITSKEFA EAYQSFHVGK KLADELTTPY DKTKSHPAAL STKKYGIGTK
0501: QMLKVCADRE FLLMKRNSFV YIFKLFQLMV MAMIMMTVFF RTKMPRDDMD DGGMYAGALF FVVVVIMFNG MAEINLTILK LPVYFKQRDL LFYPSWAYAL
0601: PTWILKIPIT FIEVGLWTFL TYYVMGFDPN VSRLFKQFLL LVLVHQMASG LFRFIGAAGR TMGVATTFGA FALVLQFALS GFVLSRNDVK KWWIWGYWIS
0701: PLMYSVNSIL VNEFDGKKWE HIVPNGAEPL GHAVVRSRGF FPDAYWYWIG VGALIGYIII FNLCYSIALA YLNPFGKPQA IISEDSENVR LIEGSETDGQ
0801: DKKRGMVLPF EPHSITFDNV VYSVDMPQEI KDQGSTEDRL VLLKGVSGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGDIKISG YPKKQETFAR
0901: ISGYCEQNDI HSPYITVYES LVYSAWLRLP QDVDKNKRKM FVEEVMELVE LTPLRSALVG LPGVNGLSTE QRKRLTIAVE LVANPSIIFM DEPTSGLDAR
1001: AAAIVMRAVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLM KRGGQEIYVG PLGRYSCHLI KYFESLPGVS KIKEAYNPAT WMLEVTAASQ EMMLGVDFAD
1101: LYKKSDLYKR NKALIAELST PRPGTKDLHF ETQFSQSFWT QCMACLWKQH LSYWRNPSYT AVRFIFTVIL ALVFGTLFWD LGGRVSQSQD LFNAMGSMYA
1201: ATLFLGVQNS SSVQPVVAVE RTVFYRERAA GMYSVFTLCL WTGYR

Best Arabidopsis Sequence Match ( AT1G15520.2 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVLQKNIIE SEIYDFSLRK PQIQTSICSR FSSRSHTFSC KR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.