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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • cytosol 1
  • plasma membrane 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane, plastid
PProwler:mitochondrion
TargetP:mitochondrion
YLoc:plasma membrane
 plasma membrane: 18260611
plasma membrane: 18557835
plasma membrane: 19502382
plasma membrane: 27800704
plasma membrane: 28056797
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 19502382 doi
M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto
Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID: 18557835 doi
SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis
Department of Biology Area 9, University of York, York YO10 5DD, UK.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr1P14530_001 Banana mitochondrion, plasma membrane 71.69 81.24
TraesCS3B01G248400.1 Wheat cytosol, peroxisome, plasma membrane 89.33 79.44
TraesCS3D01G234400.1 Wheat plasma membrane 89.17 79.3
TraesCS3A01G217900.1 Wheat cytosol 89.17 79.3
HORVU3Hr1G053350.8 Barley vacuole 89.33 79.27
Zm00001d011315_P002 Maize plasma membrane 86.39 77.35
KXG32865 Sorghum plasma membrane 86.77 76.95
KXG32863 Sorghum cytosol, peroxisome, plasma membrane 85.77 76.43
Os01t0609200-00 Rice plasma membrane 84.69 74.8
Os08t0384500-01 Rice plasma membrane 43.93 74.44
Os01t0342750-01 Rice plasma membrane 39.68 73.18
PGSC0003DMT400005785 Potato cytosol, peroxisome, plasma membrane 35.34 73.12
Os01t0609000-00 Rice plasma membrane 82.91 73.02
EER98908 Sorghum cytosol, nucleus, plasma membrane 81.98 72.55
Zm00001d044442_P036 Maize plasma membrane 87.78 72.11
Os01t0609900-02 Rice plasma membrane 75.95 70.75
Solyc12g019640.1.1 Tomato plasma membrane 33.26 70.72
GSMUA_Achr6P34530_001 Banana plasma membrane 71.62 70.2
GSMUA_Achr9P02950_001 Banana plasma membrane 75.1 69.91
VIT_09s0002g05370.t01 Wine grape mitochondrion, plasma membrane 73.16 66.57
PGSC0003DMT400048449 Potato cytosol, peroxisome, plasma membrane 62.57 66.47
KRH23522 Soybean mitochondrion 71.62 64.94
Solyc05g053590.2.1 Tomato cytosol, mitochondrion, peroxisome, plasma membrane 70.77 64.8
KRH61824 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 72.39 64.6
KRH52503 Soybean cytosol, peroxisome, plasma membrane 72.31 64.57
Os09t0333000-00 Rice plasma membrane 40.53 64.53
PGSC0003DMT400034130 Potato cytosol, mitochondrion, peroxisome, plasma membrane, plastid 62.1 64.5
KRH09797 Soybean endoplasmic reticulum 71.08 64.4
KRH47506 Soybean endoplasmic reticulum 71.0 64.38
PGSC0003DMT400076208 Potato plastid 71.69 64.38
Solyc09g091660.2.1 Tomato plastid 71.62 64.31
VIT_04s0008g04790.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 71.38 64.28
VIT_09s0002g05560.t01 Wine grape plasma membrane 72.24 64.24
PGSC0003DMT400061280 Potato cytosol, nucleus, plasma membrane, plastid 71.0 63.97
Solyc12g098210.1.1 Tomato plastid 70.46 63.93
Bra026124.1-P Field mustard cytosol, nucleus, plasma membrane, plastid 69.84 63.91
CDY36570 Canola cytosol, nucleus, plasma membrane, plastid 69.84 63.91
PGSC0003DMT400043433 Potato endoplasmic reticulum, plasma membrane 7.5 63.82
Solyc12g100180.1.1 Tomato mitochondrion, nucleus, plasma membrane, plastid 70.77 63.76
CDY39660 Canola cytosol, nucleus, plasma membrane 69.76 63.75
AT1G15520.1 Thale cress plastid 69.91 63.53
KRH47220 Soybean plasma membrane 46.64 63.41
PGSC0003DMT400076209 Potato plasma membrane 70.15 63.29
Solyc08g067620.2.1 Tomato nucleus 71.0 63.18
KRH67471 Soybean endoplasmic reticulum 69.99 62.63
KRH16029 Soybean cytosol 70.07 62.61
KRH05088 Soybean endoplasmic reticulum 69.45 62.06
KRG95762 Soybean mitochondrion 68.29 61.75
Os09t0332300-00 Rice plasma membrane 39.29 61.5
Os02t0318500-00 Rice plasma membrane 21.66 61.27
KRH09795 Soybean endoplasmic reticulum 69.91 59.79
Os06t0554800-01 Rice plasma membrane 53.6 59.38
Os07t0522500-01 Rice plasma membrane 22.82 59.36
PGSC0003DMT400005783 Potato cytosol, peroxisome, plasma membrane 70.53 57.72
Os08t0544400-01 Rice plasma membrane 20.42 55.58
Os01t0177900-01 Rice plasma membrane 60.71 55.05
KRG95752 Soybean cytosol, peroxisome, plasma membrane 67.29 54.0
Os01t0516900-00 Rice plasma membrane 28.23 51.99
Solyc12g019620.1.1 Tomato cytosol, nucleus, plasma membrane 32.95 50.9
Os12t0512700-01 Rice cytosol, peroxisome 28.54 48.24
VIT_04s0008g04840.t01 Wine grape plasma membrane 39.91 46.11
Os01t0724500-01 Rice plasma membrane 7.19 45.37
Os11t0587600-01 Rice plasma membrane 22.51 43.76
Os12t0239900-01 Rice plasma membrane 2.24 40.28
Os02t0528900-01 Rice cytosol, plasma membrane 6.65 28.48
Os07t0522600-02 Rice plasma membrane 0.08 0.16
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300UniProt:A0A0P0V522InterPro:AAA+_ATPaseInterPro:ABCG_PDR_2InterPro:ABC_2_trans
InterPro:ABC_transporter-likeProteinID:BAS73101.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626
GO:GO:0055085InterPro:IPR003439EnsemblPlantsGene:Os01g0609300EnsemblPlants:Os01t0609300-01InterPro:P-loop_NTPaseInterPro:PDR_assoc
PFAM:PF00005PFAM:PF01061PFAM:PF08370PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF273
SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0003938AFFSEG:seg:
Description
PLEIOTROPIC DRUG RESISTANCE 9Similar to Pleiotropic drug resistance protein 3. (Os01t0609300-01);Hypothetical conserved gene. (Os01t0609300-02)
Coordinates
chr1:-:24075070..24081389
Molecular Weight (calculated)
144981.0 Da
IEP (calculated)
8.418
GRAVY (calculated)
0.120
Length
1293 amino acids
Sequence
(BLAST)
0001: NALGILPNRK QTMPVLHDVS GIIKPRRMTL LLGPPGSGKT TLLLALAGRL GKDLKASGKV TYNGHGMEEF VPERTAAYIS QHDLHIGEMT VRETLAFSAR
0101: CQGVGSRFDM LTELSRREKA ANIKPDADID AFMKAAAMGG QEANVNTDYI LKILGLEICA DTMVGDEMLR GISGGQRKRV TTGEMLVGPA RALFMDEIST
0201: GLDSSTTFQI VNSLRQTVHI LGGTAVISLL QPAPETYNLF DDIILLSDGQ IVYQGPREDV LEFFESMGFK CPDRKGVADF LQEVTSKKDQ RQYWARHDKP
0301: YRFVTVKEFV SAFQSFHTGR AIANELAVPF DKSKSHPAAL ATTRYGAPGK ELLKANIDRE ILLMKRNSFV YMFRTFQLMV VSLIAMTLFF RTKMKRDSVT
0401: SGGIYMGALF FGVLMIMFNG FSELALTVFK LPVFFKQRDL LFYPAWSYTI PSWILKIPIT FIEVGGYVFL TYYVIGFDSN VGSFFKQYLL MLAINQMAGS
0501: LFRFIGGAAR NMIVANVFAS FMLLIFMVLG GFILAREQVK KWWIWGYWIS PMMYAQNAIS VNELMGHSWN KIVNSSASNE TLGVQVLKSR GVFPEARWYW
0601: IGFGAMIGFT ILFNALFTLA LTYLRPYGNS RQSVSEEELK EKRANLNGEI VGDVHLSSGS TRRPMGNGTE NDSTIVDDDT EVTQRGMVLP FTPLSLSFDN
0701: VRYSVDMPQE MKAQGVADDR LELLKGVSGS FRPGVLTALM GVSGAGKTTL MDVLAGRKTG GYIEGSINIS GYPKKQETFA RVSGYCEQND IHSPQVTVYE
0801: SLLFSAWLRL PEDVDSNTRK MFIEEVMELV ELKSLRDALV GLPGVNGLST EQRKRLTIAV ELVANPSIIF MDEPTSGLDA RAAAIVMRTV RNTVNTGRTV
0901: VCTIHQPSID IFEAFDELFL MKRGGEEIYA GPLGHHSSEL IKYFESIPGV SKIKDGYNPA TWMLEVTTIG QEQALGVDFS DIYKKSELYQ RNKALIKDLS
1001: QPAPDSSDLY FPTQYSQSSL TQCMACLWKQ NLSYWRNPPY NAVRFFFTTV IALLFGTIFW DLGGKVTKSQ DLFNAMGSMY AAVLFIGVMN CTSVQPVVAV
1101: ERTVFYRERA AGMYSAFPYA FGQVVIEIPY TLVQATVYGI IVYAMIGFEW TAAKFFWYLF FMVFTLLYFT FYGMMAVGLT PNYHIASIVS SAFYAIWNLF
1201: SGFVIPRPRV PIWWRWYCWA CPVAWTLYGL VVSQFGDIET PMEDGTPVKV FVENYFGFKH SWLGWVATVV AAFAFLFASL FGFAIMKFNF QKR
Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.