Factsheet for Os02t0528900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0587600-01	Rice	plasma membrane	43.05	19.55
Os02t0318500-00	Rice	plasma membrane	22.85	15.1
Os01t0516900-00	Rice	plasma membrane	30.79	13.25
Os01t0609200-00	Rice	plasma membrane	45.7	9.43
Os01t0609900-02	Rice	plasma membrane	43.05	9.37
Os01t0609000-00	Rice	plasma membrane	44.7	9.2
Os01t0177900-01	Rice	plasma membrane	38.41	8.13
Os12t0512700-01	Rice	cytosol, peroxisome	20.53	8.1
Os01t0609300-01	Rice	plasma membrane	28.48	6.65
Os06t0554800-01	Rice	plasma membrane	0.99	0.26
Os07t0522500-01	Rice	plasma membrane	0.0	0.0
Os07t0522600-02	Rice	plasma membrane	0.0	0.0
Os08t0384500-01	Rice	plasma membrane	0.0	0.0
Os08t0544400-01	Rice	plasma membrane	0.0	0.0
Os09t0332300-00	Rice	plasma membrane	0.0	0.0
Os09t0333000-00	Rice	plasma membrane	0.0	0.0
Os01t0724500-01	Rice	plasma membrane	0.0	0.0
Os12t0239900-01	Rice	plasma membrane	0.0	0.0
Os01t0342750-01	Rice	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0P0VJX8	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	ProteinID:BAS79015.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	EnsemblPlantsGene:Os02g0528900	EnsemblPlants:Os02t0528900-01	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF14510
PANTHER:PTHR19241	PANTHER:PTHR19241:SF259	SUPFAM:SSF52540	UniParc:UPI0000DF0728	SEG:seg	:

Description

PLEIOTROPIC DRUG RESISTANCE 2Similar to PDR-like ABC transporter. (Os02t0528900-01)

Coordinates

chr2:-:19406608..19420786

Molecular Weight (calculated)

34100.1 Da

IEP (calculated)

9.481

GRAVY (calculated)

-0.451

Length

302 amino acids

Sequence
(BLAST)

001: MSQLEVVEME DKKQQQQQQR EEAEAEAPVV PSSLRAAATC RSLSSLSSSL RWDHRGDDDE EEAELRWAAI ERLPTLDRMR TSVLSSEAVD VRRLGAAQRR
101: VLVERLVADI QRDNLRLLRK QRRRMERVGV RQPTVEVRWR NVRVEADCQV VSGKPLPTLL NTVLATARGL SRRPHARIPI LNDVTGILKP SRLTLLLGPP
201: GCGKTTLLLA LAGKLDKNLK VTGEVEYNGA NLNTFVPEKT SAYISQYDLH VPEMTVRETL DFSARFQGVG TRAEIMKEVI RREKEAGITP DPDIDTYMKV
301: FL

Best Arabidopsis Sequence Match ( AT4G15215.10 )
(BLAST)

0001: MREDVDKAKS FQVEFACGNG VDDEEKLRSQ WATVERLPTF KRVTTALLHT GDDSSDIIDV TKLEDAERRL LIEKLVKQIE ADNLRLLRKI RKRIDEVGIE
0101: LPTVEVRFND LSVEAECQVV HGKPIPTLWN TIKGSLSKFV CSKKETKIGI LKGVSGIVRP GRMTLLLGPP GCGKTTLLQA LSGRLSHSVK VGGKVSYNGC
0201: LLSEFIPEKT SSYISQNDLH IPELSVRETL DFSACCQGIG SRMEIMKEIS RREKLKEIVP DPDIDAYMKA ISVEGLKNSM QTDYILKILG LDICADTRAG
0301: DATRPGISGG QKRRLTTATT LLMDEISNGL DSSTTFQIVS CLQQLAHIAG ATILISLLQP APETFELFDD VILLGEGKII YHAPRADICK FFEGCGFKCP
0401: ERKGVADFLQ EVMSRKDQEQ YWCHRSKPYS YISVDSFIKK FNESNLGFLL KEELSKPFDK SQTRKDSLCF RKYSLSKWEM LKACSRREIL LMKRNSFIYL
0501: FKSGLLVFNA LVTMTVFLQA GATRDARHGN YLMGSMFTAL FRLLADGLPE LTLTISRLGV FCKQKDLYFY PAWAYAIPSI ILRIPLSVLD SFIWTVLTYY
0601: VIGYSPEVGR FFRHFIILLT FHLSCISMFR AIASICRTFV ACSITGAISV LLLALFGGFV IPKSSMPTWL GWGFWLSPLS YAEIGLTANE FFSPRWRKLT
0701: SGNITAGEQV LDVRGLNFGR HSYWTAFGAL VGFVLFFNAL YTLALTYRNN PQRSRAIVSH GKNSQCSEED FKPCPEITSR AKTGKVILPF KPLTVTFQNV
0801: QYYIETPQGK TRQLLFDITG ALKPGVLTSL MGVSGAGKTT LLDVLSGRKT RGIIKGEIRV GGYPKVQETF ARVSGYCEQF DIHSPNITVE ESLKYSAWLR
0901: LPYNIDAKTK NELVKEVLET VELEDIKDSM VGLPGISGLS TEQRKRLTIA VELVSNPSII FLDEPTTGLD ARAAAIVMRA VKNVAETGRT VVCTIHQPSI
1001: DIFETFDELI LMKDGGQLVY YGPLGKHSSK VIKYFESIPG VPKVQKNCNP ATWMLDITCK SAEHRLGMDF AQAYKDSTLY KENKMVVEQL SSASLGSEAL
1101: SFPSRYSQTG WGQLKACLWK QHCSYWRNPS HNLTRIVFIL LNSLLCSLLF WQKAKDINNQ QDLFSIFGSM YTIVIFSGIN NCATVMNFIA TERNVFYRER
1201: FARMYSSWAY SFSQVLVEVP YSLLQSLLCT IIVYPMIGYH MSVYKMFWSL YSIFCSLLIF NYCGMLMVAL TPNIHMALTL RSTFFSMVNL FAGFVMPKQK
1301: IPKWWIWMYY LSPTSWVLEG LLSSQYGDVE KEITVFGEKK SVSAFLEDYF GYKHDSLAVV AFVLIAFPII VASLFAFFMS KLNFQKK

Arabidopsis Description

ABCG41ABC transporter G family member 41 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.