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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • cytosol 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:plasma membrane
plasma membrane: 18260611
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0609000-00 Rice plasma membrane 90.57 90.33
Os01t0609300-01 Rice plasma membrane 74.8 84.69
EES03255 Sorghum cytosol, peroxisome, plasma membrane, plastid 84.08 84.14
KXG32860 Sorghum plasma membrane 80.74 80.79
GSMUA_Achr1P14530_001 Banana mitochondrion, plasma membrane 62.7 80.46
GSMUA_Achr9P02950_001 Banana plasma membrane 71.17 75.02
Os01t0609900-02 Rice plasma membrane 70.29 74.14
GSMUA_Achr6P34530_001 Banana plasma membrane 66.39 73.69
Os01t0342750-01 Rice plasma membrane 35.25 73.61
PGSC0003DMT400005785 Potato cytosol, peroxisome, plasma membrane 30.94 72.48
Os08t0384500-01 Rice plasma membrane 37.7 72.35
VIT_09s0002g05370.t01 Wine grape mitochondrion, plasma membrane 69.26 71.36
Solyc12g019640.1.1 Tomato plasma membrane 29.17 70.23
KRH61824 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 68.99 69.7
KRH52503 Soybean cytosol, peroxisome, plasma membrane 68.92 69.68
VIT_04s0008g04790.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 68.24 69.57
KRH23522 Soybean mitochondrion 67.76 69.57
KRH47506 Soybean endoplasmic reticulum 67.28 69.07
PGSC0003DMT400034130 Potato cytosol, mitochondrion, peroxisome, plasma membrane, plastid 58.61 68.92
KRH09797 Soybean endoplasmic reticulum 67.08 68.82
CDY36570 Canola cytosol, nucleus, plasma membrane, plastid 66.39 68.79
Bra026124.1-P Field mustard cytosol, nucleus, plasma membrane, plastid 66.39 68.79
VIT_09s0002g05560.t01 Wine grape plasma membrane 68.31 68.78
CDY39660 Canola cytosol, nucleus, plasma membrane 66.26 68.55
Solyc08g067620.2.1 Tomato nucleus 68.03 68.55
Solyc05g053590.2.1 Tomato cytosol, mitochondrion, peroxisome, plasma membrane 65.98 68.41
PGSC0003DMT400076208 Potato plastid 67.14 68.26
Solyc09g091660.2.1 Tomato plastid 67.08 68.19
AT1G15520.1 Thale cress plastid 66.12 68.03
Solyc12g098210.1.1 Tomato plastid 66.19 68.0
PGSC0003DMT400076209 Potato plasma membrane 66.33 67.76
KRH67471 Soybean endoplasmic reticulum 66.53 67.4
KRH16029 Soybean cytosol 66.46 67.24
PGSC0003DMT400061280 Potato cytosol, nucleus, plasma membrane, plastid 65.44 66.76
Solyc12g100180.1.1 Tomato mitochondrion, nucleus, plasma membrane, plastid 65.37 66.69
KRH05088 Soybean endoplasmic reticulum 65.64 66.41
PGSC0003DMT400048449 Potato cytosol, peroxisome, plasma membrane 55.05 66.23
KRG95762 Soybean mitochondrion 64.55 66.08
PGSC0003DMT400043433 Potato endoplasmic reticulum, plasma membrane 6.83 65.79
Os09t0333000-00 Rice plasma membrane 36.41 65.64
KRH47220 Soybean plasma membrane 41.8 64.35
KRH09795 Soybean endoplasmic reticulum 66.46 64.35
Os02t0318500-00 Rice plasma membrane 19.67 63.02
PGSC0003DMT400005783 Potato cytosol, peroxisome, plasma membrane 67.35 62.41
Os09t0332300-00 Rice plasma membrane 34.7 61.5
Os01t0177900-01 Rice plasma membrane 58.27 59.82
Os07t0522500-01 Rice plasma membrane 20.22 59.56
Os06t0554800-01 Rice plasma membrane 46.99 58.95
Solyc12g019620.1.1 Tomato cytosol, nucleus, plasma membrane 33.06 57.83
KRG95752 Soybean cytosol, peroxisome, plasma membrane 63.59 57.79
Os01t0516900-00 Rice plasma membrane 27.25 56.84
Os11t0587600-01 Rice plasma membrane 25.34 55.79
Os08t0544400-01 Rice plasma membrane 17.69 54.53
VIT_04s0008g04840.t01 Wine grape plasma membrane 36.75 48.08
Os12t0512700-01 Rice cytosol, peroxisome 24.93 47.71
Os01t0724500-01 Rice plasma membrane 6.63 47.32
Os02t0528900-01 Rice cytosol, plasma membrane 9.43 45.7
Os12t0239900-01 Rice plasma membrane 1.84 37.5
Os07t0522600-02 Rice plasma membrane 0.07 0.16
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300EntrezGene:4327727InterPro:AAA+_ATPaseInterPro:ABCG_PDR_1InterPro:ABCG_PDR_2
InterPro:ABC_2_transInterPro:ABC_trans_NInterPro:ABC_transporter-likeEMBL:AP002844ProteinID:BAF05452.1ProteinID:BAS73100.1
ProteinID:CAD59566.1ProteinID:DAA00885.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626
GO:GO:0055085InterPro:IPR003439EnsemblPlantsGene:Os01g0609200EnsemblPlants:Os01t0609200-00InterPro:P-loop_NTPaseInterPro:PDR_assoc
PFAM:PF00005PFAM:PF01061PFAM:PF08370PFAM:PF14510PFscan:PS50893PANTHER:PTHR19241
PANTHER:PTHR19241:SF273UniProt:Q8GU92SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI00000AE271
RefSeq:XP_015638596.1SEG:seg::::
Description
PLEIOTROPIC DRUG RESISTANCE 11Similar to Pleiotropic drug resistance protein 3. (Os01t0609200-00)
Coordinates
chr1:-:24065207..24073621
Molecular Weight (calculated)
163879.0 Da
IEP (calculated)
7.575
GRAVY (calculated)
0.092
Length
1464 amino acids
Sequence
(BLAST)
0001: MDAAAEMQKV VSLRRGGGGS SSRGAASMWW SADNGVFSRS RASSSGEDGE DDEEALRWAA LEKLPTYDRV RRAVLPVVEE GGGGGEAGKK VVDVLSLGPQ
0101: ERRALLERLV RVAEDDNERF LLKLKERIDR VGIDIPTIEV RFEHLEAEAE VRVGNSGLPT VLNSMTNKLE GAANALGILP NKKQTMPILH DVSGIVKPRR
0201: MTLLLGPPGS GKTTLLLALA GRLGKDIKFS GQVTYNGHQM EDFVPQRTAA YISQHDLHIG EMTVRETLSF SARCQGVGSR FDMLTELSRR EKAANIKPDA
0301: DIDAFMKASA MEGQETNLIT DYILKILGLD ICADTMVGDD MVRGISGGQR KRVTTGEMLV GPANALFMDE ISTGLDSSTT FQIVKSLRQA IHILGGTAVI
0401: SLLQPAPETY DLFDDIILLS DGQIVYQGPR EGVLEFFELM GFKCPERKGV ADFLQEVTSR KDQKQYWMQH DKPYRYVPVK DFASAFQSFH TGKSIANELA
0501: TPFDKSKNHP AALTTSRYGV SAMELLKANI DREFLLMKRN SFVYIFRACQ LMVVSAIAMT VFFRTKMHRD SVTDGVIFMG ALFFSVMMIM FNGLSELPLT
0601: IFKLPVFFKQ RDLLFFPAWT YTIPSWILKI PMSFIEVGGF VFMSYYVIGF DPSAGRFFKQ YLLMLAINQM AAALFRFVGG AARNMIVANV FGSFMLLIFM
0701: VLGGFILVRE KVKKWWIWGY WISPMMYAQN AISVNEFLGH SWDKVLNNSL SNETLGVQAL RSRGVFPEAK WYWIGFGALL GFIMLFNGLF TLALTYLKPY
0801: GKSQPSVSEE ELKEKQANIN GNVLDVDTMA SSTNLAIVDN TETSSEIADN SQPTQRGMVL PFAPLSLTFD NIKYSVDMPQ EMKAHGIVED RLELLKGVSG
0901: SFRPGVLTAL MGVSGAGKTT LMDVLAGRKT GGYIEGNITI SGYPKKQETF ARVSGYCEQN DIHSPQVTVS ESLLFSAWLR LPKDVDSNTR KMFIEEVMEL
1001: VELKPLRDAL VGLPGVNGLS TEQRKRLTIA VELVANPSII FMDEPTSGLD ARAAAIVMRT VRNTVDTGRT VVCTIHQPSI DIFEAFDELF LMKRGGEEIY
1101: VGPLGHQSSE LIKYFEGIKG VSRIKDGYNP ATWMLEVSTI SQEQALGVDF CDIYRKSELF QRNKALIQEL STPPPGSSEL YFPTKYSLSF LNQCLACLWK
1201: MHLSYWRNPP YNAIRLFFTT VIALLFGTIF WDLGGKTGKS QDLFNAMGSM YSAVLFIGVL NSQSVQPVVS VERTVFYRER AAGMYSAFPY AFGQVAIEFP
1301: YTLVQSIIYG IIVYSMIGFK WTAAKFFWYL FFMFFTFLYF TFYGMMAVGL TPSYHVASIV SSAFYGIWNL FSGFIIPRPK VPIWWRWYCW ICPVAWTLYG
1401: LVASQFGDIM TPMDDGTPVK IFVENYFDFK HSWLGVVAVV IVAFTMLFAF LFGFAIMKLN FQKR
Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.