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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY36570 Canola cytosol, nucleus, plasma membrane, plastid 94.17 94.83
CDY39660 Canola cytosol, nucleus, plasma membrane 94.1 94.63
Bra026124.1-P Field mustard cytosol, nucleus, plasma membrane, plastid 93.96 94.62
GSMUA_Achr1P14530_001 Banana mitochondrion, plasma membrane 58.89 73.44
VIT_09s0002g05370.t01 Wine grape mitochondrion, plasma membrane 72.17 72.27
Solyc09g091660.2.1 Tomato plastid 71.61 70.76
VIT_09s0002g05560.t01 Wine grape plasma membrane 72.24 70.7
PGSC0003DMT400034130 Potato cytosol, mitochondrion, peroxisome, plasma membrane, plastid 61.84 70.68
PGSC0003DMT400076208 Potato plastid 71.47 70.62
PGSC0003DMT400076209 Potato plasma membrane 70.7 70.2
GSMUA_Achr9P02950_001 Banana plasma membrane 68.38 70.05
Os01t0609300-01 Rice plasma membrane 63.53 69.91
Solyc05g053590.2.1 Tomato cytosol, mitochondrion, peroxisome, plasma membrane 69.36 69.9
PGSC0003DMT400061280 Potato cytosol, nucleus, plasma membrane, plastid 70.2 69.62
Solyc12g098210.1.1 Tomato plastid 69.36 69.26
GSMUA_Achr6P34530_001 Banana plasma membrane 64.16 69.22
KRH67471 Soybean endoplasmic reticulum 69.99 68.93
Solyc12g100180.1.1 Tomato mitochondrion, nucleus, plasma membrane, plastid 69.43 68.85
TraesCS3D01G234400.1 Wheat plasma membrane 69.08 67.61
TraesCS3B01G248400.1 Wheat cytosol, peroxisome, plasma membrane 69.01 67.54
HORVU3Hr1G053350.8 Barley vacuole 69.01 67.4
Os08t0384500-01 Rice plasma membrane 36.12 67.37
EES03260 Sorghum plasma membrane 60.58 67.34
TraesCS3A01G217900.1 Wheat cytosol 68.8 67.33
KXG32863 Sorghum cytosol, peroxisome, plasma membrane 68.59 67.26
Zm00001d011315_P002 Maize plasma membrane 68.17 67.17
KXG32865 Sorghum plasma membrane 68.17 66.53
Os01t0342750-01 Rice plasma membrane 32.75 66.48
Os01t0609900-02 Rice plasma membrane 64.72 66.35
Os01t0609200-00 Rice plasma membrane 68.03 66.12
TraesCS3A01G218000.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 67.11 65.91
TraesCS3D01G234300.2 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 67.11 65.91
EES03255 Sorghum cytosol, peroxisome, plasma membrane, plastid 67.67 65.82
TraesCS3B01G248500.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 66.97 65.77
KRG95762 Soybean mitochondrion 65.78 65.45
TraesCS2A01G483300.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 66.55 65.36
HORVU3Hr1G071470.1 Barley cytosol, mitochondrion, nucleus, plasma membrane 66.06 65.28
HORVU7Hr1G092510.2 Barley plasma membrane 66.06 65.23
Zm00001d011319_P003 Maize cytosol, mitochondrion, peroxisome, plasma membrane 67.04 65.21
Zm00001d044443_P001 Maize cytosol, mitochondrion, nucleus, plasma membrane 66.34 65.19
TraesCS7B01G292700.1 Wheat plasma membrane 65.5 65.17
TraesCS3A01G272800.2 Wheat cytosol, mitochondrion, nucleus, plasma membrane 65.78 65.0
Os01t0609000-00 Rice plasma membrane 66.97 64.92
TraesCS7D01G386600.1 Wheat plasma membrane 65.92 64.91
TraesCS7A01G391100.1 Wheat plasma membrane 65.78 64.86
TraesCS3D01G272200.2 Wheat cytosol, mitochondrion, nucleus, plasma membrane 65.64 64.86
HORVU7Hr1G092380.8 Barley cytosol 65.64 64.55
HORVU3Hr1G053380.1 Barley cytosol, mitochondrion, peroxisome, plasma membrane 66.9 64.54
EER98908 Sorghum cytosol, nucleus, plasma membrane 66.2 64.48
TraesCS7A01G391000.1 Wheat plasma membrane 65.71 64.39
TraesCSU01G097600.2 Wheat plasma membrane 65.64 64.33
TraesCS7D01G386500.1 Wheat plasma membrane 65.64 64.33
TraesCS3B01G523700.1 Wheat mitochondrion 48.21 64.11
GSMUA_Achr9P01490_001 Banana plasma membrane 67.18 64.03
KXG32860 Sorghum plasma membrane 65.71 63.91
TraesCS3B01G306400.2 Wheat cytosol, mitochondrion, nucleus, plasma membrane 65.78 63.41
TraesCS5D01G190600.1 Wheat cytosol, nucleus, plasma membrane 64.02 62.91
TraesCS5B01G183500.1 Wheat cytosol, nucleus, plasma membrane 63.88 62.78
HORVU5Hr1G056280.6 Barley cytosol, nucleus, plasma membrane 63.88 62.69
TraesCS3B01G524400.1 Wheat cytosol, peroxisome, plasma membrane 63.11 62.45
TraesCS2B01G149900.1 Wheat cytosol, peroxisome, plasma membrane 54.25 62.16
TraesCS3A01G479800.1 Wheat cytosol, nucleus, plasma membrane 63.11 62.15
TraesCS3D01G474700.1 Wheat cytosol, nucleus, plasma membrane 63.11 62.15
EER98758 Sorghum cytosol, nucleus, plasma membrane 63.25 62.11
TraesCS5A01G185500.1 Wheat cytosol, nucleus, plasma membrane 60.86 62.03
HORVU3Hr1G105140.4 Barley cytosol, peroxisome, plasma membrane 63.04 62.03
Zm00001d044442_P036 Maize plasma membrane 68.59 62.01
TraesCS2D01G130000.1 Wheat cytosol, peroxisome, plasma membrane 61.35 61.01
KXG20401 Sorghum plasma membrane 61.91 60.76
Os09t0333000-00 Rice plasma membrane 34.29 60.1
KRG95752 Soybean cytosol, peroxisome, plasma membrane 67.18 59.34
PGSC0003DMT400043433 Potato endoplasmic reticulum, plasma membrane 6.32 59.21
AT3G16340.1 Thale cress plasma membrane 58.4 58.69
Os09t0332300-00 Rice plasma membrane 33.52 57.75
AT2G36380.1 Thale cress cytosol, mitochondrion, peroxisome, plasma membrane 58.89 57.67
AT1G66950.1 Thale cress plastid 58.82 57.57
AT2G26910.1 Thale cress cytosol, peroxisome, plasma membrane 57.27 57.39
TraesCS6A01G107100.1 Wheat mitochondrion, plasma membrane 49.82 56.36
TraesCS6D01G094800.1 Wheat plasma membrane 36.61 56.26
AT1G59870.1 Thale cress plasma membrane, plastid 57.98 56.16
TraesCS2A01G127800.1 Wheat cytosol, peroxisome, plasma membrane 30.78 55.65
AT3G30842.1 Thale cress cytosol 54.95 55.15
AT2G29940.1 Thale cress cytosol, peroxisome, plasma membrane 54.88 54.77
Os01t0516900-00 Rice plasma membrane 25.58 51.85
AT3G53480.1 Thale cress cytosol, peroxisome, plasma membrane 51.02 50.07
AT4G15233.1 Thale cress cytosol, peroxisome, plasma membrane 47.29 48.35
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300EntrezGene:838122InterPro:AAA+_ATPaseProteinID:AAF71978.1InterPro:ABCG_PDR_2
InterPro:ABC_2_transInterPro:ABC_trans_NInterPro:ABC_transporter-likeProteinID:AEE29332.1ArrayExpress:AT1G15520EnsemblPlantsGene:AT1G15520
RefSeq:AT1G15520TAIR:AT1G15520RefSeq:AT1G15520-TAIR-GEnsemblPlants:AT1G15520.1TAIR:AT1G15520.1Unigene:At.49303
ProteinID:DAA00880.1GO:GO:0000166GO:GO:0002229GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0006855GO:GO:0006950GO:GO:0006952GO:GO:0008150GO:GO:0009605
GO:GO:0009607GO:GO:0009719GO:GO:0009723GO:GO:0009751GO:GO:0009753GO:GO:0010193
GO:GO:0015692GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626
GO:GO:0046865GO:GO:0080168InterPro:IPR003439RefSeq:NP_173005.1InterPro:P-loop_NTPaseSymbol:PDR12
InterPro:PDR_assocPFAM:PF00005PFAM:PF01061PFAM:PF08370PFAM:PF14510PO:PO:0000013
PO:PO:0000293PO:PO:0001054PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0020100PO:PO:0025022PO:PO:0025281PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF444
UniProt:Q9M9E1SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI00000A2437SEG:seg
Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
Coordinates
chr1:-:5331858..5338326
Molecular Weight (calculated)
161027.0 Da
IEP (calculated)
8.242
GRAVY (calculated)
0.019
Length
1423 amino acids
Sequence
(BLAST)
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.