Factsheet for Zm00001d011315_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG32863	Sorghum	cytosol, peroxisome, plasma membrane	93.84	93.38
KXG32865	Sorghum	plasma membrane	93.42	92.52
Zm00001d044442_P036	Maize	plasma membrane	95.22	87.36
Os01t0609300-01	Rice	plasma membrane	77.35	86.39
HORVU3Hr1G053350.8	Barley	vacuole	86.08	85.31
TraesCS3B01G248400.1	Wheat	cytosol, peroxisome, plasma membrane	85.8	85.21
TraesCS3A01G217900.1	Wheat	cytosol	85.73	85.14
TraesCS3D01G234400.1	Wheat	plasma membrane	85.66	85.08
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	63.02	79.75
GSMUA_Achr9P02950_001	Banana	plasma membrane	72.02	74.87
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	32.06	74.08
GSMUA_Achr6P34530_001	Banana	plasma membrane	67.59	74.0
Zm00001d044443_P001	Maize	cytosol, mitochondrion, nucleus, plasma membrane	73.2	73.0
Zm00001d011319_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	73.68	72.73
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	70.84	71.99
KRH23522	Soybean	mitochondrion	69.53	70.41
KRH09797	Soybean	endoplasmic reticulum	69.53	70.36
Solyc08g067620.2.1	Tomato	nucleus	70.57	70.13
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	60.46	70.12
PGSC0003DMT400076208	Potato	plastid	69.67	69.86
Solyc09g091660.2.1	Tomato	plastid	69.39	69.58
Solyc12g019640.1.1	Tomato	plasma membrane	29.29	69.57
VIT_09s0002g05560.t01	Wine grape	plasma membrane	70.01	69.53
KRH47506	Soybean	endoplasmic reticulum	68.63	69.5
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	67.94	69.48
Solyc12g098210.1.1	Tomato	plastid	68.56	69.47
VIT_04s0008g04790.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	68.98	69.36
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	67.31	68.79
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	67.31	68.79
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	68.35	68.78
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	68.21	68.64
KRH52503	Soybean	cytosol, peroxisome, plasma membrane	68.77	68.58
CDY39660	Canola	cytosol, nucleus, plasma membrane	67.17	68.55
KRH61824	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	68.77	68.53
PGSC0003DMT400076209	Potato	plasma membrane	67.73	68.25
AT1G15520.1	Thale cress	plastid	67.17	68.17
KRH67471	Soybean	endoplasmic reticulum	67.38	67.34
Zm00001d053612_P003	Maize	mitochondrion, plasma membrane	67.24	67.29
KRH16029	Soybean	cytosol	67.24	67.1
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	56.44	66.97
KRH05088	Soybean	endoplasmic reticulum	66.97	66.83
KRG95762	Soybean	mitochondrion	65.72	66.36
KRH09795	Soybean	endoplasmic reticulum	67.24	64.22
KRH47220	Soybean	plasma membrane	42.17	64.04
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	6.72	63.82
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	69.74	63.73
Zm00001d048860_P001	Maize	cytosol, nucleus, plasma membrane	63.78	63.69
Solyc12g019620.1.1	Tomato	cytosol, nucleus, plasma membrane	34.07	58.78
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	64.54	57.85
Zm00001d021647_P003	Maize	plastid	56.99	56.92
Zm00001d036986_P002	Maize	plasma membrane	58.1	55.64
Zm00001d009037_P003	Maize	plastid	56.09	55.29
Zm00001d039631_P002	Maize	plasma membrane	57.13	55.22
Zm00001d025012_P003	Maize	plastid	56.02	55.07
Zm00001d046277_P002	Maize	cytosol, nucleus, plasma membrane	58.31	54.68
Zm00001d034940_P003	Maize	plastid	56.02	54.3
Zm00001d043598_P003	Maize	cytosol, nucleus, plasma membrane	55.54	53.9
Zm00001d003354_P002	Maize	cytosol, peroxisome, plasma membrane	52.01	52.41
Zm00001d052726_P008	Maize	cytosol, nucleus, plasma membrane	47.65	50.26
Zm00001d031724_P003	Maize	plasma membrane	48.13	49.79
Zm00001d023392_P002	Maize	cytosol, peroxisome, plasma membrane	50.14	49.18
Zm00001d019961_P001	Maize	plasma membrane	35.73	48.86
VIT_04s0008g04840.t01	Wine grape	plasma membrane	36.63	47.27

Protein Annotations

EntrezGene:103636060	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2
InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	ProteinID:AQK96511.1	ProteinID:AQK96524.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	UniProt:K7V744	InterPro:P-loop_NTPase
InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF273	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000220991D
EnsemblPlantsGene:Zm00001d011315	EnsemblPlants:Zm00001d011315_P002	EnsemblPlants:Zm00001d011315_T002	SEG:seg	:	:

Description

ABC transporter G family member 40

Coordinates

chr8:-:146513037..146520523

Molecular Weight (calculated)

162215.0 Da

IEP (calculated)

7.759

GRAVY (calculated)

0.076

Length

1444 amino acids

Sequence
(BLAST)

0001: MDAAGDIQKV ASMRRGDSGS MWRRGDDVFS RSSREEDDEE ALRWAALEKL PTYDRIRRAI VPLGLGDEAP GSKGLVDVDV LSLGPRERRA LLERLVRVAD
0101: EDNERFLLKL KDRIDRVGID MPTIEVRFQN LEAEAEVRVG SSGLPTVLNS VVNTVEEAAN ALHILPSRKQ IMPILHDVSG IIKPRRLTLL LGPPGSGKTT
0201: LLLALAGRLD KDLKFSGKVT YNGHEMTEFV PERTAAYISQ HDLHIGEMTV RETLAFSARC QGVGSRLDML TELSRREKAA NIKPDADIDA FMKAAALGGQ
0301: DANVVTDYIL KILGLDICAD TMVGDEMLRG ISGGQRKRVT TGEMLVGPAR ALFMDEISTG LDSSTTFQIV NSLRQSIHIL GGTAVISLLQ PAPETYNLFD
0401: DIILLSDGQV VYQGPREEVV EFFESVGFRC PERKGVADFL QEVTSKKDQK QYWARPDEPY RFVSVKELAT AFKSSHTGRA LANELAVPFD KSKSHPAALT
0501: TTRYGVSGKE LLKANIDREI LLMKRNSFVY MFRTFQLMVM SIIAMTLFFR TKMKHDTVND GGIYMGALFF GVLMIMFNGL SELALTVFKL PVFFKQRDLL
0601: FFPAWSYTIP AWILKVPITF IEVGGYVFLT YYVIGFDPNV GRFFKQYLLL LAVNQMTAAL FRFVGGVSRN MIVANVFASF MLLVVMVLGG FILQRDKVKK
0701: WWIWGYWISP MMYAQNAISV NEMLGHSWDK ILNSTASNET LGVQVLKSRG VFPEAKWYWI GFGAMVGFTI LFNALFTLAL TYLKPYGNSR PSVSKEELKE
0801: KHANIKGEVV DGNHLVSVNP VTDSAIMEDD SASTKKGMIL PFVPLSVTFD NIKYSVDMPQ EMKGQGVQED RLELLKSISG SFRPGVLTAL MGVSGAGKTT
0901: LMDVLAGRKT GGYIEGDIRI SGYPKKQETF ARVSGYCEQN DIHSPQVTVY ESLLFSAWLR LPKDVDSNKR KIFIEEVMEL VELKPLRNAL VGLPGVNGLS
1001: TEQRKRLTIA VELVANPSII FMDEPTSGLD ARAAAIVMRT VRNTVDTGRT VVCTIHQPSI DIFEAFDELF LMKRGGEEIY AGPLGHNSSE LIKYFEEIQG
1101: VSKIKDGYNP ATWMLEVTTI SQEQILGVDF SDIYKKSELY QRNKALIKEL SQPAPGSTDL HFSSKYAQSF NTQCVACLWK QNLSYWRNPP YNTVRFFFTG
1201: IIALLLGTIF WDLGSKVYTS QDLLNAMGSM YSAVLFIGVM NCTSVQPVVA VERTVFYRER AAGMYSAFPY AFGQVVIELP YALAQDILYA VIVYSMIGFE
1301: WTVAKFFWYL FFGYFTLLYF TFYGMMTVGL TPNYHIAAIV SAAFYAIWNL FSGFVIPRPK VPIWWRWYCW ICPVAWTLYG LVVSQYGDIM TEMDDKRTVK
1401: VFVEDYFDFK HSWLGWVAAV VVAFGVLFAT LFAFAIMKLN FQKR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.