Factsheet for TraesCS6D01G094800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 6
extracellular 3
endoplasmic reticulum 3
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G107100.1	Wheat	mitochondrion, plasma membrane	92.33	67.97
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	43.2	64.0
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	10.26	62.5
Solyc12g019640.1.1	Tomato	plasma membrane	40.28	61.35
TraesCS5D01G023400.1	Wheat	plasma membrane	41.36	46.2
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	55.62	42.32
KRH47220	Soybean	plasma membrane	41.79	40.69
TraesCS3D01G234400.1	Wheat	plasma membrane	61.99	39.48
TraesCS3D01G234300.2	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	60.91	38.92
VIT_04s0008g04790.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	59.83	38.58
TraesCS3D01G272200.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	59.94	38.54
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	58.32	38.0
KRH61824	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	59.4	37.96
KRH52503	Soybean	cytosol, peroxisome, plasma membrane	59.29	37.91
TraesCS3D01G474700.1	Wheat	cytosol, nucleus, plasma membrane	58.86	37.72
VIT_09s0002g05560.t01	Wine grape	plasma membrane	59.07	37.62
TraesCS5D01G190600.1	Wheat	cytosol, nucleus, plasma membrane	58.75	37.57
KRH05088	Soybean	endoplasmic reticulum	58.53	37.46
TraesCS7D01G386600.1	Wheat	plasma membrane	58.21	37.3
KRH16029	Soybean	cytosol	58.21	37.25
CDY39660	Canola	cytosol, nucleus, plasma membrane	56.7	37.1
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	56.48	37.01
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	57.34	37.0
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	56.37	36.94
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	56.26	36.9
TraesCS2D01G130000.1	Wheat	cytosol, peroxisome, plasma membrane	56.8	36.76
Solyc08g067620.2.1	Tomato	nucleus	57.67	36.75
KRH47506	Soybean	endoplasmic reticulum	56.59	36.75
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	56.91	36.72
TraesCS7D01G386500.1	Wheat	plasma membrane	57.56	36.71
AT1G15520.1	Thale cress	plastid	56.26	36.61
VIT_04s0008g04840.t01	Wine grape	plasma membrane	44.17	36.55
KRH67471	Soybean	endoplasmic reticulum	57.02	36.54
Solyc12g098210.1.1	Tomato	plastid	56.05	36.42
KRH09797	Soybean	endoplasmic reticulum	56.05	36.37
KRG95762	Soybean	mitochondrion	56.05	36.29
PGSC0003DMT400076208	Potato	plastid	56.37	36.25
TraesCS6D01G166100.1	Wheat	plasma membrane	56.59	36.19
Solyc09g091660.2.1	Tomato	plastid	56.16	36.11
PGSC0003DMT400076209	Potato	plasma membrane	55.83	36.08
KRH23522	Soybean	mitochondrion	55.51	36.04
KRH09795	Soybean	endoplasmic reticulum	57.34	35.12
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	58.32	34.18
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	45.25	33.65
TraesCS7D01G185700.2	Wheat	plasma membrane	47.62	33.43
TraesCS3D01G124400.2	Wheat	plasma membrane	51.3	32.4
TraesCS7D01G069500.1	Wheat	cytosol, peroxisome, plasma membrane	48.6	32.1
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	55.4	31.84
TraesCS7D01G269400.1	Wheat	cytosol, nucleus, plasma membrane	45.79	31.41
TraesCS7D01G100700.1	Wheat	plasma membrane	43.63	30.61
TraesCS5D01G564000.1	Wheat	plastid	47.84	30.45
TraesCS5D01G452500.1	Wheat	plastid	47.08	30.05
TraesCS2D01G051800.1	Wheat	plasma membrane	44.49	29.43
TraesCS7D01G465900.2	Wheat	cytosol, peroxisome, plasma membrane	43.41	28.9
TraesCS5D01G163500.1	Wheat	plasma membrane	43.84	27.9
TraesCS5D01G163700.1	Wheat	cytosol, peroxisome, plasma membrane	43.52	27.7
Os01t0516900-00	Rice	plasma membrane	19.87	26.21
Solyc12g019620.1.1	Tomato	cytosol, nucleus, plasma membrane	14.9	16.49

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase	InterPro:PDR_assoc
PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF437
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G094800	EnsemblPlants:TraesCS6D01G094800.1	TIGR:cd03232
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:59201796..59207331

Molecular Weight (calculated)

105120.0 Da

IEP (calculated)

8.622

GRAVY (calculated)

0.263

Length

926 amino acids

Sequence
(BLAST)

001: MAMIAFIALT IFWKSNMHRD SLTDGGLYLG VLFFFVGETM FSNLGDLGGT IMKLPLFFKE RDVFYPAWAY TLPQWILKIP ITLVEITILV SMTYYAVGFD
101: PNIGRFFKQY FLLLALSQMS SSLFRLIAGV TRNMFAANIF GTFTMLLLLL LGGFLLSSEN FNKFWLLGYW ISPLMYAQTA ISTNEFTSHR WSKALPRSTE
201: PLGTSVLKSR GIFVEAKWYW IGLGVLIGYT IIFNGLYTAA FTYFKTHGRG FSSLTNKALD KKFAKLSRDA PLKRSHQKRV MNEMESPTNN GRVSLPFVPL
301: SLTFDNIRYS VDMPKENKAR GETKDRLEIL KGVSGCFRPG VLTALMGISG AGKTTLMDVL AGRITGGYRE GTITISGYQK KQETFCRIFG YCEQSDIHSP
401: HLTILESLLF SAWLRLPSEI DSLTRRIFVE DVLEILELTS LGGAQVGYPG GYGLSIEQRK RLTIAVELVA NPSIIFMDEP TSGLDARAAA IVMRTVRNLV
501: DTGKTVACTI HQPSIDIFET FDELFLLNRG GEEIYVGPLG EQSLNMITYF EGIGVNRIQD GYNPATWMLE VTSTLQEQML GINLSVIFKQ SELYQKNKAL
601: IKELSMPPPS STDLHFPDEY SQSLVKQCLI CLWKQNLSYW RNIHYTGSRY CITIIIALLF GTVFWDLGMK RWVFQLSPDC YLFLYCGLHI VKCFSTPYRA
701: RRQDLFNSMG SMYAAILMIG ISNASGVQPV IAMERIVFYK ERASQMYSSL PYTFAQVVIE LPYVLVQSLI YGVLVYAMIG FEWTATKFFW YLFFMYFTFL
801: YFTFFGMMAA GLSPSGGIAA IISSASYGLW NLFSGFLIPV SRIPIWWSWY YWICPVAWTL YGLVTSQFGD VEEKLETDET VAEFLRSYYG FKHEFLGVIA
901: TVTMGCTVAF ALLFGFSIKY INFQRR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.