Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G524400.1 | Wheat | cytosol, peroxisome, plasma membrane | 97.72 | 98.19 |
| TraesCS3A01G479800.1 | Wheat | cytosol, nucleus, plasma membrane | 97.72 | 97.72 |
| HORVU3Hr1G105140.4 | Barley | cytosol, peroxisome, plasma membrane | 97.09 | 97.03 |
| TraesCS3B01G523700.1 | Wheat | mitochondrion | 70.38 | 95.05 |
| TraesCS5D01G190600.1 | Wheat | cytosol, nucleus, plasma membrane | 85.26 | 85.08 |
| EER98758 | Sorghum | cytosol, nucleus, plasma membrane | 83.53 | 83.3 |
| TraesCS2D01G130000.1 | Wheat | cytosol, peroxisome, plasma membrane | 80.14 | 80.92 |
| Os09t0333000-00 | Rice | plasma membrane | 43.25 | 76.97 |
| GSMUA_Achr1P14530_001 | Banana | mitochondrion, plasma membrane | 59.93 | 75.9 |
| Os09t0332300-00 | Rice | plasma membrane | 40.83 | 71.43 |
| PGSC0003DMT400005785 | Potato | cytosol, peroxisome, plasma membrane | 30.73 | 71.04 |
| Solyc12g019640.1.1 | Tomato | plasma membrane | 29.41 | 69.9 |
| GSMUA_Achr9P02950_001 | Banana | plasma membrane | 66.99 | 69.69 |
| GSMUA_Achr6P34530_001 | Banana | plasma membrane | 63.11 | 69.14 |
| TraesCS3D01G234400.1 | Wheat | plasma membrane | 69.41 | 68.98 |
| TraesCS3D01G234300.2 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 68.17 | 67.98 |
| VIT_09s0002g05370.t01 | Wine grape | mitochondrion, plasma membrane | 66.16 | 67.28 |
| KRH47506 | Soybean | endoplasmic reticulum | 66.37 | 67.25 |
| TraesCS7D01G386600.1 | Wheat | plasma membrane | 66.44 | 66.44 |
| VIT_04s0008g04790.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 65.88 | 66.3 |
| TraesCS3D01G272200.2 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 65.95 | 66.18 |
| KRH23522 | Soybean | mitochondrion | 65.05 | 65.92 |
| KRH09797 | Soybean | endoplasmic reticulum | 65.05 | 65.87 |
| TraesCS7D01G386500.1 | Wheat | plasma membrane | 66.02 | 65.7 |
| VIT_09s0002g05560.t01 | Wine grape | plasma membrane | 65.88 | 65.47 |
| Solyc12g098210.1.1 | Tomato | plastid | 64.5 | 65.4 |
| Solyc05g053590.2.1 | Tomato | cytosol, mitochondrion, peroxisome, plasma membrane | 63.88 | 65.37 |
| KRH61824 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 65.47 | 65.29 |
| KRH52503 | Soybean | cytosol, peroxisome, plasma membrane | 65.4 | 65.26 |
| PGSC0003DMT400034130 | Potato | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 56.12 | 65.14 |
| Solyc08g067620.2.1 | Tomato | nucleus | 65.4 | 65.04 |
| PGSC0003DMT400048449 | Potato | cytosol, peroxisome, plasma membrane | 54.67 | 64.91 |
| PGSC0003DMT400043433 | Potato | endoplasmic reticulum, plasma membrane | 6.78 | 64.47 |
| Solyc09g091660.2.1 | Tomato | plastid | 64.22 | 64.44 |
| PGSC0003DMT400076208 | Potato | plastid | 64.15 | 64.38 |
| KRH16029 | Soybean | cytosol | 64.43 | 64.34 |
| PGSC0003DMT400061280 | Potato | cytosol, nucleus, plasma membrane, plastid | 63.81 | 64.25 |
| Solyc12g100180.1.1 | Tomato | mitochondrion, nucleus, plasma membrane, plastid | 63.46 | 63.9 |
| KRH05088 | Soybean | endoplasmic reticulum | 63.81 | 63.72 |
| PGSC0003DMT400076209 | Potato | plasma membrane | 63.11 | 63.64 |
| KRH67471 | Soybean | endoplasmic reticulum | 63.6 | 63.6 |
| CDY39660 | Canola | cytosol, nucleus, plasma membrane | 62.01 | 63.32 |
| Bra026124.1-P | Field mustard | cytosol, nucleus, plasma membrane, plastid | 61.8 | 63.2 |
| CDY36570 | Canola | cytosol, nucleus, plasma membrane, plastid | 61.8 | 63.2 |
| AT1G15520.1 | Thale cress | plastid | 62.15 | 63.11 |
| KRG95762 | Soybean | mitochondrion | 62.35 | 63.01 |
| KRH47220 | Soybean | plasma membrane | 41.45 | 62.99 |
| TraesCS6D01G166100.1 | Wheat | plasma membrane | 62.35 | 62.22 |
| KRH09795 | Soybean | endoplasmic reticulum | 63.18 | 60.38 |
| PGSC0003DMT400005783 | Potato | cytosol, peroxisome, plasma membrane | 65.05 | 59.49 |
| TraesCS6D01G094800.1 | Wheat | plasma membrane | 37.72 | 58.86 |
| TraesCS5D01G023400.1 | Wheat | plasma membrane | 32.32 | 56.33 |
| TraesCS7D01G185700.2 | Wheat | plasma membrane | 50.93 | 55.8 |
| TraesCS5D01G452500.1 | Wheat | plastid | 55.64 | 55.41 |
| TraesCS5D01G564000.1 | Wheat | plastid | 55.78 | 55.4 |
| KRG95752 | Soybean | cytosol, peroxisome, plasma membrane | 61.59 | 55.25 |
| TraesCS3D01G124400.2 | Wheat | plasma membrane | 55.85 | 55.05 |
| Solyc12g019620.1.1 | Tomato | cytosol, nucleus, plasma membrane | 31.56 | 54.48 |
| TraesCS2D01G051800.1 | Wheat | plasma membrane | 52.66 | 54.36 |
| TraesCS7D01G269400.1 | Wheat | cytosol, nucleus, plasma membrane | 47.82 | 51.19 |
| TraesCS7D01G069500.1 | Wheat | cytosol, peroxisome, plasma membrane | 49.27 | 50.78 |
| TraesCS5D01G163500.1 | Wheat | plasma membrane | 49.83 | 49.48 |
| TraesCS5D01G163700.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.72 | 48.38 |
| TraesCS7D01G465900.2 | Wheat | cytosol, peroxisome, plasma membrane | 46.57 | 48.38 |
| VIT_04s0008g04840.t01 | Wine grape | plasma membrane | 36.19 | 46.74 |
| TraesCS7D01G100700.1 | Wheat | plasma membrane | 42.35 | 46.36 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans | InterPro:ABC_trans_N |
| InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 | InterPro:P-loop_NTPase |
| InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 | PFscan:PS50893 |
| PANTHER:PTHR19241 | PANTHER:PTHR19241:SF306 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3D01G474700 |
| EnsemblPlants:TraesCS3D01G474700.1 | TIGR:cd03232 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3D:+:575673722..575681133
Molecular Weight (calculated)
162303.0 Da
IEP (calculated)
7.624
GRAVY (calculated)
0.018
Length
1445 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDDAGEIHRG FGGLRRGGSS NAFSRSSHRA DEHDDEEALR WAALERLPTR DRARTAVLDH FPGRDDGVRA VDVGRLAPGE RAALLRRVAS VADDHGRFLA
0101: RFKERVDRVG IELPTIEVRY ENLCVEAEAY VGSRGLPTIL HTYANVLEGM ANSLHITPNR KQKISVLHNV SGTIKPHRMT LLLGPPGAGK TTLLLALAGT
0201: LPSSLEMSGK ITYNGHTMDE FVPRRSAAYV SQNDLHIGEL TVRETVNFSA KCQGSGHRFD LLMELSRREK EANIKPDPEI DVYLKAAATG EQKAEVVTNH
0301: ILKILGLDMC ADTIVGNNML RGISGGQKKR VTTAEMLVTP GRALFMDEIS TGLDSSTTFQ IVNSIRQTIH ILGGTAVISL LQPAPETYEL FDDIILLSDG
0401: QVVYNGPREH VLGFFESVGF KCPERKGVAD FLQEVTSRKD QRQYWIHSDE TYRYVAVKNF AEAFQSFHVG QAIRSELSVP FDKSRSHPAA LKTSKYGASM
0501: KELLKANINR EMLLMRRNSF VYIFKATQLT LMAIITMTVF LRTNMHHDSI TNGGIYMGAL FFGIVMIMFN GLAEVGLTVA KLPVFFKQRD LLFFPAWTYS
0601: LPSWIIKTPL SLLNASIWVF ITYYVIGFDP NVERLFRQFL LLLVMSETAS GLFRFIAGLA RNQIVANTIG SFFLLICMLT GGFVLSRENV KKWWIWGYWI
0701: SPLMYAQNAI SVNEFLGDSW NKTIPGFKEP LGRLVLESRG MFTEAKWYWI GVGALLGYVL LFNALYTICL TFLKPFDSNQ QTISEETMKI KQANLTGEIL
0801: EETLGGNNNT ATLDTADESN GESTANNTTV NSCPSKKGMI LPFTPLSLTF EDIRYSVDMP EEVKAQGVKE DRLELLKGIS GSFRPGVLTA LMGVSGAGKT
0901: TLMDVLAGRK TSGYVEGNIT ISGYPKKQET FARVSGYCEQ NDIHSPNVTV YESLAFSAWL RLPADVDSST RKMFIDEVME LVELSPLKDS LVGLPGVTGL
1001: STEQRKRLTI AVELVANPSI IFMDEPTSGL DARAAAIVMR TIRNTVDTGR TVVCTIHQPS IDIFESFDEL FLMKRGGEEI YVGPLGRHSC ELIRYFEAIE
1101: GVSKIKDSYN PSTWMLEVTS AVQEQITGIN FSQVYKNSEL YEMNKKIIKE LSTPPKGSND LSFPTQYSQN FLTQCFACLW KQSQSYWRNP PYTAVKYFYT
1201: VVMALLFGTM FWGIGSKRQS QQDLFNAMGS MYASVLYMGV QNSATVQPVV AVERTVFYRE RAAHMYSPLP YALGQVAIEL PYIFVQSLIY GVIVYAMIGF
1301: EWTAVKLFWY LFFMFFTLSY YTFYGMMTVG LTPNYNIASV VSSAFYTMWN LFSGFIIPRT RIPIWWRWYY WLCPVSWTLY GLVASQFGDV TEKLDNGMLV
1401: SEFVGSYFGY HHDFLWAVGL VVASFAVLFA FLFGLSIKLF NWQKR
0101: RFKERVDRVG IELPTIEVRY ENLCVEAEAY VGSRGLPTIL HTYANVLEGM ANSLHITPNR KQKISVLHNV SGTIKPHRMT LLLGPPGAGK TTLLLALAGT
0201: LPSSLEMSGK ITYNGHTMDE FVPRRSAAYV SQNDLHIGEL TVRETVNFSA KCQGSGHRFD LLMELSRREK EANIKPDPEI DVYLKAAATG EQKAEVVTNH
0301: ILKILGLDMC ADTIVGNNML RGISGGQKKR VTTAEMLVTP GRALFMDEIS TGLDSSTTFQ IVNSIRQTIH ILGGTAVISL LQPAPETYEL FDDIILLSDG
0401: QVVYNGPREH VLGFFESVGF KCPERKGVAD FLQEVTSRKD QRQYWIHSDE TYRYVAVKNF AEAFQSFHVG QAIRSELSVP FDKSRSHPAA LKTSKYGASM
0501: KELLKANINR EMLLMRRNSF VYIFKATQLT LMAIITMTVF LRTNMHHDSI TNGGIYMGAL FFGIVMIMFN GLAEVGLTVA KLPVFFKQRD LLFFPAWTYS
0601: LPSWIIKTPL SLLNASIWVF ITYYVIGFDP NVERLFRQFL LLLVMSETAS GLFRFIAGLA RNQIVANTIG SFFLLICMLT GGFVLSRENV KKWWIWGYWI
0701: SPLMYAQNAI SVNEFLGDSW NKTIPGFKEP LGRLVLESRG MFTEAKWYWI GVGALLGYVL LFNALYTICL TFLKPFDSNQ QTISEETMKI KQANLTGEIL
0801: EETLGGNNNT ATLDTADESN GESTANNTTV NSCPSKKGMI LPFTPLSLTF EDIRYSVDMP EEVKAQGVKE DRLELLKGIS GSFRPGVLTA LMGVSGAGKT
0901: TLMDVLAGRK TSGYVEGNIT ISGYPKKQET FARVSGYCEQ NDIHSPNVTV YESLAFSAWL RLPADVDSST RKMFIDEVME LVELSPLKDS LVGLPGVTGL
1001: STEQRKRLTI AVELVANPSI IFMDEPTSGL DARAAAIVMR TIRNTVDTGR TVVCTIHQPS IDIFESFDEL FLMKRGGEEI YVGPLGRHSC ELIRYFEAIE
1101: GVSKIKDSYN PSTWMLEVTS AVQEQITGIN FSQVYKNSEL YEMNKKIIKE LSTPPKGSND LSFPTQYSQN FLTQCFACLW KQSQSYWRNP PYTAVKYFYT
1201: VVMALLFGTM FWGIGSKRQS QQDLFNAMGS MYASVLYMGV QNSATVQPVV AVERTVFYRE RAAHMYSPLP YALGQVAIEL PYIFVQSLIY GVIVYAMIGF
1301: EWTAVKLFWY LFFMFFTLSY YTFYGMMTVG LTPNYNIASV VSSAFYTMWN LFSGFIIPRT RIPIWWRWYY WLCPVSWTLY GLVASQFGDV TEKLDNGMLV
1401: SEFVGSYFGY HHDFLWAVGL VVASFAVLFA FLFGLSIKLF NWQKR
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.