Factsheet for HORVU3Hr1G071470.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G272800.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	95.56	95.56
TraesCS3D01G272200.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	95.42	95.42
TraesCS3B01G306400.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	95.62	93.29
Os01t0342750-01	Rice	plasma membrane	41.46	85.16
EES03260	Sorghum	plasma membrane	73.75	82.97
Zm00001d044443_P001	Maize	cytosol, mitochondrion, nucleus, plasma membrane	82.29	81.84
Zm00001d011319_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	82.85	81.54
HORVU3Hr1G053380.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	83.26	81.29
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	59.93	75.64
GSMUA_Achr9P02950_001	Banana	plasma membrane	70.21	72.79
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	31.46	72.48
HORVU3Hr1G053350.8	Barley	vacuole	72.99	72.13
Solyc12g019640.1.1	Tomato	plasma membrane	30.0	71.05
GSMUA_Achr6P34530_001	Banana	plasma membrane	64.51	70.43
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	68.61	69.53
HORVU7Hr1G092510.2	Barley	plasma membrane	68.68	68.63
HORVU7Hr1G092380.8	Barley	cytosol	68.54	68.21
Solyc08g067620.2.1	Tomato	nucleus	68.4	67.79
KRH23522	Soybean	mitochondrion	66.94	67.6
KRH47506	Soybean	endoplasmic reticulum	66.88	67.53
KRH52503	Soybean	cytosol, peroxisome, plasma membrane	67.71	67.33
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	58.19	67.31
HORVU5Hr1G056280.6	Barley	cytosol, nucleus, plasma membrane	67.5	67.03
KRH61824	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	67.43	67.01
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	65.62	66.93
KRH09797	Soybean	endoplasmic reticulum	66.32	66.92
PGSC0003DMT400076209	Potato	plasma membrane	66.6	66.92
VIT_09s0002g05560.t01	Wine grape	plasma membrane	67.57	66.92
Solyc12g098210.1.1	Tomato	plastid	66.18	66.88
HORVU3Hr1G105140.4	Barley	cytosol, peroxisome, plasma membrane	67.15	66.87
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	65.49	66.74
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	65.49	66.74
CDY39660	Canola	cytosol, nucleus, plasma membrane	65.49	66.64
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	66.32	66.55
PGSC0003DMT400076208	Potato	plastid	66.53	66.53
Solyc09g091660.2.1	Tomato	plastid	66.39	66.39
VIT_04s0008g04790.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	66.04	66.23
AT1G15520.1	Thale cress	plastid	65.28	66.06
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	65.62	65.85
HORVU6Hr1G036800.21	Barley	plasma membrane	65.83	65.47
KRH16029	Soybean	cytosol	65.69	65.38
KRH67471	Soybean	endoplasmic reticulum	65.49	65.26
KRG95762	Soybean	mitochondrion	64.58	65.03
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	54.93	65.0
KRH05088	Soybean	endoplasmic reticulum	65.0	64.69
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	6.81	64.47
KRH47220	Soybean	plasma membrane	41.39	62.67
KRH09795	Soybean	endoplasmic reticulum	65.21	62.1
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	67.15	61.2
HORVU3Hr1G022800.1	Barley	plasma membrane	57.64	58.0
HORVU7Hr1G037750.8	Barley	cytosol, plasma membrane	44.17	57.25
HORVU7Hr1G088630.1	Barley	vacuole	51.46	57.0
HORVU5Hr1G124650.12	Barley	plasma membrane	30.0	56.92
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	63.47	56.73
Solyc12g019620.1.1	Tomato	cytosol, nucleus, plasma membrane	32.64	56.15
HORVU5Hr1G106850.1	Barley	cytosol	56.39	54.28
HORVU7Hr1G016870.2	Barley	cytosol	50.49	52.23
HORVU3Hr1G116680.1	Barley	mitochondrion, plasma membrane	45.14	51.38
HORVU7Hr1G056530.12	Barley	cytosol, nucleus	47.57	50.78
HORVU4Hr1G081040.4	Barley	cytosol, nucleus, plasma membrane	46.25	49.41
HORVU5Hr1G049490.3	Barley	nucleus, plastid	47.22	48.78
VIT_04s0008g04840.t01	Wine grape	plasma membrane	36.18	46.56

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A287LKY2	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2
InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	EnsemblPlantsGene:HORVU3Hr1G071470	EnsemblPlants:HORVU3Hr1G071470.1	InterPro:IPR003439	InterPro:P-loop_NTPase	InterPro:PDR_assoc
PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF264	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000B470BFC	SEG:seg

Description

No Description!

Coordinates

chrchr3H:+:540557830..540569926

Molecular Weight (calculated)

163219.0 Da

IEP (calculated)

7.627

GRAVY (calculated)

0.009

Length

1440 amino acids

Sequence
(BLAST)

0001: MSREIHKVAS LRRGSWRSSD DVFSRSSSRF QDEEDDEEAL RWAALERLPT YDRVRRGILL ADTGEKVDVD VGRLGARESR ALIDRLVRAA DDDHERFLLK
0101: LKDRMDRVGI DYPTIEVRFE KLQVEAEVLV GNRALPTLVN SVRNTLEAIG HALHIFPRRK HSMTVLHDVS GIIKPRRMTL LLGPPGSGKT TLLLALAGKL
0201: DKDLKVSGKV SYNGHEMNEF VPERTAAYIS QHDLHTGEMT VRETLAFSAR CQGVGSRYEM LMELARRENT ENIKPDNDID VYMKASAMGG QEYNVVTEYI
0301: LKMLGLDICA DTVVGNDMLR GISGGQRKRV TTGEMLVGPA RALFMDEIST GLDSSTTYQI VNSIRQTIHI LGGTAVISLL QPAPETYNLF DDIILLSDGY
0401: VVYQGAREHI LEFFESMGFR CPQRKGVADF LQEVTSRKDQ EQYWYRSDMP YRFVPVKQFA DSFHSFHMGQ FIQNELLEPF DRSRSHPAAL ATSKFGVSRI
0501: ELLKATMDRE FLLMKRNSFY FIFKAGQLSL MAFIAMSTFF RTNMHRDSTY GTIYMGALYF ALDAIMFNGF SELGMTAMKL PVFFKQRDLL FFPAWAYTIP
0601: AWILQIPITF LEVGVYVFTT YYVIGFDPSV SRLFKQYMLL LALNQMSSSL FRFIAGLGRD MVVSSTFGPL ALASFTILGG FILAKPDVKK WWIWGYWVSP
0701: LSYAQNAIST NEFLGHSWNK ILPGQNDTLG ITILKSRGIF TEAKWYWIGF GAMIGYTLLF NLLYTLALSV LNPLGDPHPT MSENAIKEKH ANLTGEILEN
0801: PEKKKCRKPE VSGITNQNRA ISNTDSSSRR KGMVLPFAQL SLSFNTVTYS VDMPQAMSAQ GVTDDRLVLL KGVSGSFRPG VLTALMGVSG AGKTTLMDVL
0901: AGRKTGGYIE GDITISGYPK KQDTFARISG YCEQNDIHSP HVTVYESLTF SAWLRLPSEV DLVTRKMFIE EVMELVELTS LRDALVGLPG VNGLSTEQRK
1001: RLTIAVELVA NPSIIFMDEP TSGLDARAAA IVMRAVRNTV NTGRTVVCTI HQPSIDIFEA FDELFLMKRG GEEIYVGPLG HNSSKLIEYF EGIEGVCKIK
1101: DGYNPATWML EVTSTIQEEM LSVDFCEIYR RSELYRRNKE LIEELSTPNP DSSDLDFPSK YSRSFFTQCL ACLWKQKLSY WRNPSYTAMR FLFTIIIALL
1201: FGTMFWNLGR KTEREQDLFN AVGSMYAAVL YLGIQNSGTV QPVVAVERTV FYRERAAGMY SAFPYAFGQV AIEFPYILVQ TMIYGVLVYS MIGFEWSVAK
1301: FFWYLFFMYF TLLYFTFYGM MAVGLTPNES VAAIISGAVY TAWNLFSGYL IPRPKIPVWW RWYSWICPVA WTLYGLVASQ FGDIQTKLVT KDQTVAQFIA
1401: EFYGFDRDLL WVVALVHVAF TVGFAFLFSF AIMRFNFQRR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.