Factsheet for PGSC0003DMT400046986

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 6
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g101070.2.1	Tomato	plastid	97.42	59.92
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	38.09	54.24
Os12t0239900-01	Rice	plasma membrane	4.04	50.0
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	8.2	48.03
VIT_14s0060g00470.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	72.92	44.82
AT3G53480.1	Thale cress	cytosol, peroxisome, plasma membrane	67.53	41.45
CDY07588	Canola	cytosol, peroxisome, plasma membrane	67.08	41.43
CDY18456	Canola	cytosol, nucleus, plasma membrane	65.06	41.18
CDY52757	Canola	cytosol, peroxisome, plasma membrane	66.52	41.08
CDX74974	Canola	cytosol	64.38	40.55
CDX91350	Canola	cytosol, peroxisome, plasma membrane	64.27	40.48
Bra005208.1-P	Field mustard	cytosol, nucleus, plasma membrane	64.04	40.28
Bra003137.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.52	40.11
GSMUA_Achr3P01060_001	Banana	plasma membrane	59.89	39.42
Bra017198.1-P	Field mustard	mitochondrion	64.83	39.2
HORVU5Hr1G049490.3	Barley	nucleus, plastid	60.56	38.67
TraesCS7D01G465900.2	Wheat	cytosol, peroxisome, plasma membrane	60.34	38.61
TraesCS7A01G478500.1	Wheat	cytosol, peroxisome, plasma membrane	59.78	38.22
CDX74973	Canola	cytosol	59.55	37.97
TraesCS7B01G381000.1	Wheat	cytosol, nucleus, plasma membrane	58.99	37.8
TraesCS5D01G163500.1	Wheat	plasma membrane	61.57	37.66
TraesCS5A01G158100.1	Wheat	plasma membrane	61.35	37.53
TraesCS5A01G158300.1	Wheat	plasma membrane	61.35	37.47
TraesCS7B01G381200.2	Wheat	plasma membrane	59.66	37.32
Zm00001d023392_P002	Maize	cytosol, peroxisome, plasma membrane	61.35	37.09
TraesCS5D01G163700.1	Wheat	cytosol, peroxisome, plasma membrane	60.56	37.04
GSMUA_Achr1P18390_001	Banana	cytosol, nucleus, plasma membrane, plastid	62.47	36.99
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	50.45	36.89
TraesCS4B01G054700.1	Wheat	cytosol, peroxisome, plasma membrane	58.99	36.56
TraesCS5B01G155400.3	Wheat	plasma membrane	58.31	36.29
OQU91497	Sorghum	cytosol, nucleus, plasma membrane	54.94	35.41
CDX91351	Canola	cytosol	48.54	34.95
TraesCS4A01G384800.1	Wheat	cytosol, nucleus, plasma membrane	54.83	34.81
PGSC0003DMT400076208	Potato	plastid	52.81	32.64
PGSC0003DMT400050166	Potato	plastid	50.79	32.47
PGSC0003DMT400067210	Potato	plasma membrane	51.12	32.34
PGSC0003DMT400076209	Potato	plasma membrane	51.57	32.03
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	50.79	31.5
PGSC0003DMT400006729	Potato	plastid	52.81	31.33
PGSC0003DMT400050158	Potato	cytosol, peroxisome, plasma membrane	50.56	31.12
PGSC0003DMT400068277	Potato	cytosol	46.18	30.76
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	42.81	30.6
CDY55440	Canola	cytosol, nucleus, plasma membrane	32.81	30.45
PGSC0003DMT400060396	Potato	plastid	50.56	30.45
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	51.35	28.92
Os12t0512700-01	Rice	cytosol, peroxisome	24.61	28.63
PGSC0003DMT400060117	Potato	cytosol	24.04	21.08

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	ProteinID:AAN85371	ProteinID:AAN85371.1	InterPro:ABCG_PDR_2
InterPro:ABC_2_trans	InterPro:ABC_transporter-like	EMBL:AY165020	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0009506	GO:GO:0009719	GO:GO:0009926
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0048364
GO:GO:0055085	GO:GO:0071366	InterPro:IPR003439	UniProt:M1BJZ2	InterPro:P-loop_NTPase	InterPro:PDR_assoc
PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	EnsemblPlantsGene:PGSC0003DMG400018249	PGSC:PGSC0003DMG400018249	EnsemblPlants:PGSC0003DMT400046986
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF437	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI000295C635	SEG:seg	:	:	:	:

Description

Pleiotropic drug resistance protein 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400018249]

Coordinates

chr1:-:78728012..78733802

Molecular Weight (calculated)

100250.0 Da

IEP (calculated)

7.502

GRAVY (calculated)

0.262

Length

890 amino acids

Sequence
(BLAST)

001: MTVFLRTRMD TDLLHANYYL GALFFALIIL LVDGFPELTM TIARLSVFYK QNDLCFYPAW AYAIPAAILK IPLSVLESVI WTCLTYYVIG FSPEAGRFFR
101: QLLLLFAVHM TSISMFRFLA SVCRTVVAST AAGSLSILFV FLFSGFVIPR PSMPVWLKWG FWISPLTYGE IGLSVNEFLA PRWQKTLSTN TTIGNEVLES
201: RGLNFDGYLY WISVCALFGF TILFNIGFTL ALTFLKAPGS RAIISRDKYS QIEGNSDSSD KADAEENSKT TMDSHEGAGR MVLPFEPLSL VFRDVQYSVD
301: TPAAMKELGF TQNKLQLLSD ITGALRPGVL AALMGVSGAG KTTLLDVLAG RKTSGHVEGE IKVGGYPKVQ ETFARVSGYC EQTDIHSPQI TVEESVIFSA
401: WLRLHPQIDS KTKYEFVKEV LETIELDGIK DTMVGMPGVS GLSTEQRKRL TIAVELVANP SIIFMDEPTT GLDARSAAIV MRAVKNVADT GRTIVCTIHQ
501: PSIDIFEAFD ELILLKTGGR MIYWGPLGRN SCKMIEYFEG ISGVPKIKNN YNPATWMLEV TSTSSEAETS IDFAEVYKNS ALHKNNEELV KKLTFPPAGS
601: KDLYFPTQFS QNGWGQFKTC FWKQYWSYWR SPSYNLMRSL HMIFASVVFG LLFWDKGTKL DDQQSVFSVF GAMFTAVIFC GINNSSSVLP YVTTERSVLY
701: RERFAGMYAS WAYALAQVAI EIPYLLAQAL AFTVITYPMI GYYWSAHKVL WYFYSMFCTL LYFTYLGMML VSLTPNLPVA AILQSSFYTM FNLFAGFLIP
801: KAQIPKWWIW FYYLVPTSWT LNGMLTSQYG DVDTEITVFG DKKSVAAFIR DYFGFHHNQL PIVGVVLIAY PLVFATLFAF FIGRLNFQRR

Best Arabidopsis Sequence Match ( AT2G37280.1 )
(BLAST)

0001: MGSSFRSSSS RNEHEDGGDE AEHALQWAEI QRLPTFKRLR SSLVDKYGEG TEKGKKVVDV TKLGAMERHL MIEKLIKHIE NDNLKLLKKI RRRMERVGVE
0101: FPSIEVRYEH LGVEAACEVV EGKALPTLWN SLKHVFLDLL KLSGVRTNEA NIKILTDVSG IISPGRLTLL LGPPGCGKTT LLKALSGNLE NNLKCYGEIS
0201: YNGHGLNEVV PQKTSAYISQ HDLHIAEMTT RETIDFSARC QGVGSRTDIM MEVSKREKDG GIIPDPEIDA YMKAISVKGL KRSLQTDYIL KILGLDICAE
0301: TLVGNAMKRG ISGGQKKRLT TAEMIVGPTK ALFMDEITNG LDSSTAFQII KSLQQVAHIT NATVFVSLLQ PAPESYDLFD DIVLMAEGKI VYHGPRDDVL
0401: KFFEECGFQC PERKGVADFL QEVISKKDQG QYWLHQNLPH SFVSVDTLSK RFKDLEIGRK IEEALSKPYD ISKTHKDALS FNVYSLPKWE LFRACISREF
0501: LLMKRNYFVY LFKTFQLVLA AIITMTVFIR TRMDIDIIHG NSYMSCLFFA TVVLLVDGIP ELSMTVQRLS VFYKQKQLCF YPAWAYAIPA TVLKIPLSFF
0601: ESLVWTCLTY YVIGYTPEPY RFFRQFMILF AVHFTSISMF RCIAAIFQTG VAAMTAGSFV MLITFVFAGF AIPYTDMPGW LKWGFWVNPI SYAEIGLSVN
0701: EFLAPRWQKM QPTNVTLGRT ILESRGLNYD DYMYWVSLSA LLGLTIIFNT IFTLALSFLK SPTSSRPMIS QDKLSELQGT KDSSVKKNKP LDSSIKTNED
0801: PGKMILPFKP LTITFQDLNY YVDVPVEMKG QGYNEKKLQL LSEITGAFRP GVLTALMGIS GAGKTTLLDV LAGRKTSGYI EGEIRISGFL KVQETFARVS
0901: GYCEQTDIHS PSITVEESLI YSAWLRLVPE INPQTKIRFV KQVLETIELE EIKDALVGVA GVSGLSTEQR KRLTVAVELV ANPSIIFMDE PTTGLDARAA
1001: AIVMRAVKNV AETGRTIVCT IHQPSIHIFE AFDELVLLKR GGRMIYSGPL GQHSSCVIEY FQNIPGVAKI RDKYNPATWM LEVTSESVET ELDMDFAKIY
1101: NESDLYKNNS ELVKELSKPD HGSSDLHFKR TFAQNWWEQF KSCLWKMSLS YWRSPSYNLM RIGHTFISSF IFGLLFWNQG KKIDTQQNLF TVLGAIYGLV
1201: LFVGINNCTS ALQYFETERN VMYRERFAGM YSAFAYALAQ VVTEIPYIFI QSAEFVIVIY PMIGFYASFS KVFWSLYAMF CNLLCFNYLA MFLISITPNF
1301: MVAAILQSLF FTTFNIFAGF LIPKPQIPKW WVWFYYITPT SWTLNLFFSS QYGDIHQKIN AFGETKTVAS FLEDYFGFHH DRLMITAIIL IAFPIALATM
1401: YAFFVAKLNF QKR

Arabidopsis Description

PDR5pleiotropic drug resistance 5 [Source:TAIR;Acc:AT2G37280]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.