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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G384800.1 Wheat cytosol, nucleus, plasma membrane 75.31 74.18
Os12t0512700-01 Rice cytosol, peroxisome 40.62 73.33
PGSC0003DMT400046986 Potato plasma membrane 35.41 54.94
CDY63361 Canola plasma membrane 15.71 54.52
CDY18456 Canola cytosol, nucleus, plasma membrane 55.25 54.27
CDX74974 Canola cytosol 55.39 54.14
CDY55440 Canola cytosol, nucleus, plasma membrane 37.44 53.91
Bra005208.1-P Field mustard cytosol, nucleus, plasma membrane 55.03 53.71
CDX91350 Canola cytosol, peroxisome, plasma membrane 54.89 53.64
Solyc01g101070.2.1 Tomato plastid 56.19 53.63
VIT_14s0060g00470.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 55.61 53.04
CDY52757 Canola cytosol, peroxisome, plasma membrane 55.18 52.88
CDY07588 Canola cytosol, peroxisome, plasma membrane 54.96 52.67
KRH02448 Soybean plasma membrane 54.96 52.27
AT3G53480.1 Thale cress cytosol, peroxisome, plasma membrane 54.6 52.0
Bra017198.1-P Field mustard mitochondrion 55.18 51.77
Bra003137.1-P Field mustard cytosol, peroxisome, plasma membrane 55.03 51.49
CDX91351 Canola cytosol 45.69 51.05
AT4G15233.1 Thale cress cytosol, peroxisome, plasma membrane 51.34 50.93
CDY06512 Canola cytosol, peroxisome, plasma membrane 50.33 50.55
Bra012797.1-P Field mustard cytosol 50.11 50.47
CDX74973 Canola cytosol 50.76 50.21
CDY65557 Canola plasma membrane 13.54 50.0
CDY58247 Canola cytosol 32.01 48.36
OQU76555 Sorghum mitochondrion, plasma membrane 43.95 46.95
EES03260 Sorghum plasma membrane 43.45 46.88
CDY65558 Canola cytosol 31.72 46.74
EES03255 Sorghum cytosol, peroxisome, plasma membrane, plastid 48.08 45.39
OQU81756 Sorghum plasma membrane 40.98 45.03
KXG37059 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 45.69 44.94
KXG32863 Sorghum cytosol, peroxisome, plasma membrane 47.14 44.87
KXG32865 Sorghum plasma membrane 47.07 44.58
EES01392 Sorghum cytosol, peroxisome, plasma membrane 47.72 44.5
KXG32860 Sorghum plasma membrane 47.07 44.43
EES04729 Sorghum mitochondrion 46.34 44.38
EER98908 Sorghum cytosol, nucleus, plasma membrane 46.71 44.15
KXG36359 Sorghum plastid 46.27 43.86
EER98758 Sorghum cytosol, nucleus, plasma membrane 45.76 43.62
EES00201 Sorghum plasma membrane 44.82 43.41
EES08826 Sorghum mitochondrion 44.9 43.21
KXG20401 Sorghum plasma membrane 45.18 43.03
OQU80771 Sorghum plasma membrane 36.21 42.59
OQU89274 Sorghum plasma membrane 28.82 40.61
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300UniProt:A0A1Z5S6D8InterPro:AAA+_ATPaseInterPro:ABCG_PDR_2InterPro:ABC_2_trans
InterPro:ABC_trans_NInterPro:ABC_transporter-likeGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
InterPro:IPR003439EnsemblPlants:OQU91497ProteinID:OQU91497ProteinID:OQU91497.1InterPro:P-loop_NTPaseInterPro:PDR_assoc
PFAM:PF00005PFAM:PF01061PFAM:PF08370PFAM:PF14510PFscan:PS50893PANTHER:PTHR19241
PANTHER:PTHR19241:SF344SMART:SM00382EnsemblPlantsGene:SORBI_3001G190900SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI000B424C04
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr1:+:16915624..16927872
Molecular Weight (calculated)
156910.0 Da
IEP (calculated)
8.531
GRAVY (calculated)
0.013
Length
1381 amino acids
Sequence
(BLAST)
0001: MAPKEIGLEM AAEEHRNGSS ADNAGEARHS VLLQSSKAGA LKRREFVDNL LKCVEDDNLG FLKRQKERIE RVGVKLPAIE VTYENLCVEA ESGYSGGNQL
0101: PTLWNSTKGF FWGFIMLLGL KSDKMKTKIL KDVSGIIKPC RLTLLLGPPG CGKSTLLRAL AGQHDKSLKV TGAISYNSYR LDEFVPEKTA VYISQYDLHI
0201: PDMTVRETLD FSARCQGVGN RAEILEEVSK REKVTGIIPD HDIDLYMKAT AVAASEKSLQ TDYILKIMGL DICADTMVGD AMKRGISGGQ KRRLTTAEMI
0301: VGPVKAFFMD EISNGLDSST TFRIIKCFQQ MANINECTML ISLLQPTPEV FDLFDDLILM AEGKIIYHGP QNEARNFFEE CGFRCPERKG MADFLQEVLS
0401: IKDQRQYWSG TDESYRYISS DQLSNMFRKY QKQRNFEEPN VPQKSKLGKE SLSFKKYSLP KLELFKACGA RETLLIKRSM FVYAFKTAQL SIVAVITMSV
0501: FFQTRMTTDL THANYYMGAL YFSIFIIMLN GIPEMSMQIA RLPSFYKQKS YHFYPSWAYA IPASILKVPV SLLCSLVWIC ITYYGIGYTA TTSRFFCQLL
0601: ILSLLHQSVM AFYRFVASYA QTHILCFFYA FISLLIFLVF GGCILPKSSI PGWLRWGFWT SPLTYAEISI CINEFLAPRW QKETMQNKTI GNQILINHGL
0701: YYSWNFYWIS VGALLGFIIL FYMAFGLALA YRRPIEAYYG SMTRKCFSKR QEETDIQKEY DDHANMTQKE KMAMSTKQLA LTFHNLNYYV DTPPEMLKLG
0801: YPARRLQLLN SITGAFCPGV LSALMGASGA GKTTLLDVLA GRKTGGYIEG DIRIGGYPKV QETFVRILGY CEQADTHSPQ LTVAESVAYS AWLRLPSQHN
0901: EKTRSEFVDE VLKTVELDQI KDSLVGRPGI NGLSLEQRKR LTVAVELVSN PSVILMDEPT TGLDARSAAT VIRAVKNISE TGRTVVCTIH QPSTDIFEAF
1001: DELILMKNGG KIIYNGPIGE QSCKVIEYFE KVSGVPKIQR NCNPATWMMD VTSASMEFQL NIDFASVYQE SHLHRNKQEL VKQLSSPLPN SENLCFSNRF
1101: TQNGWCQFKA CLWKQNITYW RSPQYNLNRM VMTTIIALTF GVLYWRHAKI LNNEQDLFNV FGAMYMGIVQ LGVYNNQSII SFSTTERIVM YREKFAGMYS
1201: SWSYSFAQAA IEIPYVLIQA LLYTCIVYPT IGYYWTAYKL LLFFYTTFCS ILSYVFVGLL LVSVTPNVQV ATILGSFFNT MQTLFSGFVL PGPKFPKWWI
1301: WLYYLTPTSW VLNSLLTSQY GNIDREVEAF GEIKSVAVFL KDYFGFHQER LSVAAVVITV FPIVLIILYS LSVEKLNFQK R
Best Arabidopsis Sequence Match ( AT3G53480.1 )
(BLAST)
0001: MAHMVGADDI ESLRVELAEI GRSIRSSFRR HTSSFRSSSS IYEVENDGDV NDHDAEYALQ WAEIERLPTV KRMRSTLLDD GDESMTEKGR RVVDVTKLGA
0101: VERHLMIEKL IKHIENDNLK LLKKIRRRID RVGMELPTIE VRYESLKVVA ECEVVEGKAL PTLWNTAKRV LSELVKLTGA KTHEAKINII NDVNGIIKPG
0201: RLTLLLGPPS CGKTTLLKAL SGNLENNLKC SGEISYNGHR LDEFVPQKTS AYISQYDLHI AEMTVRETVD FSARCQGVGS RTDIMMEVSK REKEKGIIPD
0301: TEVDAYMKAI SVEGLQRSLQ TDYILKILGL DICAEILIGD VMRRGISGGQ KKRLTTAEMI VGPTKALFMD EITNGLDSST AFQIVKSLQQ FAHISSATVL
0401: VSLLQPAPES YDLFDDIMLM AKGRIVYHGP RGEVLNFFED CGFRCPERKG VADFLQEVIS KKDQAQYWWH EDLPYSFVSV EMLSKKFKDL SIGKKIEDTL
0501: SKPYDRSKSH KDALSFSVYS LPNWELFIAC ISREYLLMKR NYFVYIFKTA QLVMAAFITM TVFIRTRMGI DIIHGNSYMS ALFFALIILL VDGFPELSMT
0601: AQRLAVFYKQ KQLCFYPAWA YAIPATVLKV PLSFFESLVW TCLSYYVIGY TPEASRFFKQ FILLFAVHFT SISMFRCLAA IFQTVVASIT AGSFGILFTF
0701: VFAGFVIPPP SMPAWLKWGF WANPLSYGEI GLSVNEFLAP RWNQMQPNNF TLGRTILQTR GMDYNGYMYW VSLCALLGFT VLFNIIFTLA LTFLKSPTSS
0801: RAMISQDKLS ELQGTEKSTE DSSVRKKTTD SPVKTEEEDK MVLPFKPLTV TFQDLNYFVD MPVEMRDQGY DQKKLQLLSD ITGAFRPGIL TALMGVSGAG
0901: KTTLLDVLAG RKTSGYIEGD IRISGFPKVQ ETFARVSGYC EQTDIHSPNI TVEESVIYSA WLRLAPEIDA TTKTKFVKQV LETIELDEIK DSLVGVTGVS
1001: GLSTEQRKRL TIAVELVANP SIIFMDEPTT GLDARAAAIV MRAVKNVADT GRTIVCTIHQ PSIDIFEAFD ELVLLKRGGR MIYTGPLGQH SRHIIEYFES
1101: VPEIPKIKDN HNPATWMLDV SSQSVEIELG VDFAKIYHDS ALYKRNSELV KQLSQPDSGS SDIQFKRTFA QSWWGQFKSI LWKMNLSYWR SPSYNLMRMM
1201: HTLVSSLIFG ALFWKQGQNL DTQQSMFTVF GAIYGLVLFL GINNCASALQ YFETERNVMY RERFAGMYSA TAYALGQVVT EIPYIFIQAA EFVIVTYPMI
1301: GFYPSAYKVF WSLYSMFCSL LTFNYLAMFL VSITPNFMVA AILQSLFYVG FNLFSGFLIP QTQVPGWWIW LYYLTPTSWT LNGFISSQYG DIHEEINVFG
1401: QSTTVARFLK DYFGFHHDLL AVTAVVQIAF PIALASMFAF FVGKLNFQRR
Arabidopsis Description
ABCG37ABC transporter G family member 37 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFH0]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.