Factsheet for Bra012797.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58247	Canola	cytosol	63.46	95.19
CDY65558	Canola	cytosol	62.66	91.68
AT4G15233.1	Thale cress	cytosol, peroxisome, plasma membrane	81.55	80.32
KRH02448	Soybean	plasma membrane	61.2	57.78
GSMUA_Achr3P01060_001	Banana	plasma membrane	55.14	55.92
Bra005208.1-P	Field mustard	cytosol, nucleus, plasma membrane	57.55	55.76
Bra017198.1-P	Field mustard	mitochondrion	58.28	54.28
Bra003137.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.35	54.2
TraesCS5D01G163700.1	Wheat	cytosol, peroxisome, plasma membrane	56.53	53.26
TraesCS7D01G465900.2	Wheat	cytosol, peroxisome, plasma membrane	53.68	52.91
TraesCS4B01G054700.1	Wheat	cytosol, peroxisome, plasma membrane	55.36	52.86
Zm00001d023392_P002	Maize	cytosol, peroxisome, plasma membrane	56.67	52.79
TraesCS5D01G163500.1	Wheat	plasma membrane	56.02	52.78
HORVU5Hr1G049490.3	Barley	nucleus, plastid	53.54	52.65
TraesCS5B01G155400.3	Wheat	plasma membrane	54.85	52.59
TraesCS7A01G478500.1	Wheat	cytosol, peroxisome, plasma membrane	53.32	52.51
TraesCS5A01G158100.1	Wheat	plasma membrane	55.51	52.3
TraesCS5A01G158300.1	Wheat	plasma membrane	55.43	52.16
GSMUA_Achr1P18390_001	Banana	cytosol, nucleus, plasma membrane, plastid	57.11	52.1
TraesCS7B01G381200.2	Wheat	plasma membrane	53.61	51.65
TraesCS7B01G381000.1	Wheat	cytosol, nucleus, plasma membrane	52.15	51.48
TraesCS4A01G384800.1	Wheat	cytosol, nucleus, plasma membrane	52.52	51.36
OQU91497	Sorghum	cytosol, nucleus, plasma membrane	50.47	50.11
Os12t0512700-01	Rice	cytosol, peroxisome	27.28	48.89
Os12t0239900-01	Rice	plasma membrane	2.55	48.61
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	48.87	47.42
Bra016669.1-P	Field mustard	plastid	49.38	47.11
Bra026156.1-P	Field mustard	plastid	49.53	47.02
Bra003527.1-P	Field mustard	plasma membrane, plastid	49.31	46.94
Bra021173.1-P	Field mustard	plasma membrane	47.99	46.57
Bra034314.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.83	45.21
Bra021598.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.46	44.58
Bra023065.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	46.24	44.37
Bra000469.1-P	Field mustard	cytosol	44.78	43.73
Bra025424.1-P	Field mustard	cytosol, nucleus, plasma membrane	44.57	43.61
Bra027171.1-P	Field mustard	plasma membrane	49.02	34.96
Bra017241.1-P	Field mustard	cytosol, mitochondrion, nucleus, plasma membrane	47.56	28.72

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
EnsemblPlantsGene:Bra012797	EnsemblPlants:Bra012797.1	EnsemblPlants:Bra012797.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	UniProt:M4D8I7	InterPro:P-loop_NTPase	InterPro:PDR_assoc
PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF449
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00025407CC	SEG:seg	:

Description

AT4G15215 (E=0.0) PDR13, ATPDR13 | PDR13; ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding

Coordinates

chrA03:+:22186668..22193738

Molecular Weight (calculated)

155086.0 Da

IEP (calculated)

7.852

GRAVY (calculated)

0.030

Length

1371 amino acids

Sequence
(BLAST)

0001: MTTPQIAGDE NGNVGDEEVR SQWAAIERLP TFERITTALF WNRDEQGKRN ERRVMDVSKL EDLDRHLFID DLIRHVEDDN LRLLQKIKNR IDEVDLELPT
0101: IEVRFSDLFV EAECEVVYGK PIPTLWNAIA SRLSRVMCLK KEKSISILNG VSGIIRPKRM TLLLGPPSCG KTSLLLALAG RLDHSLKTTG NVSYNGHLLS
0201: EFVPEKTSNY VSQNDLHIPE ITVRETLDFS GCFQGTGSRL ETMKEISRRE KLKGIIPDPD IDAYMKILGL SFCADTRVGD TSRPGISGGE KRRLTTGEMI
0301: VGPIKTLFMD EISNGLDSST TFQIVSCLQH YALLSEGTIV VSLLQPAPET FELFDDVILM GEGKIIYIGP RDYICRFFED CGFKCPTRKS VAEFLQEVIS
0401: RKDQEQYWCH IDKPYSYVSI DSFIERFKKS ELGLQQQEEL SKTLEKSQAQ KDALCSRKYS LSNWEMLKAC SRREFLLMKR NSFVYVFKSG LLICIGSITM
0501: TVYLSTGSKR DLVHANYLMG SLFFSIFKML ADGIPELTLT ISRLSVFYKQ KELYLYPAWA YALPSAILKI PISFLEAFMW TSLTYYVIGY SPDIVRFFRQ
0601: FLIFFALHLS CISMFRAIAA TFRDFVLATT MGSVSVVLLS LFGGFVLRKP SMPAWLQWGF WLSPLSYAEI GLTSNEFFST RWSQTTSGNR TLGEEVLDAR
0701: GLNFGDQSYW GAFGALIGFT FFFNVVFVLA LTFLTTSNRS RAIVSSDDDN AQSSGNHTKS SSKIATQSKN ALPFKPLTFT FQEVRYFVQT PQGKKVQLLS
0801: NVTGAFKPGV LTALMGVSGA GKTTLMDVLS GRKSRGDIEG DIQVGGYRKG QETIAKGSGY CEQFDIHSPN LTIRESLEYS AWLRLPSSIN SETKRAIVRE
0901: VLETIELEEI KDSLVGLPGV SGLTTEQRKR LTIAVELVAN PSIIFMDEPT TGLDARAAAI VMRAVKNITE TGRTVVCTIH QPGTDIFEAF DELVLMKNGG
1001: KIIYHGPLGQ HSSNVIEYFM RIPGVPKMKE NTNPATWLLD ITSRSSEDNI GVDLAQIYKE SSLFKENKIV IEQMRGTSSG TEELTSLTRY AQTGWGQFKA
1101: CLWKQHLSYW RNPSYNLTRI LFVCLTSLIC GVLFWQKANK INTQQDLFNV LGSMYTVVLF TGINNCSTVL FCIATERNVF YRERFAQMYN SWAYSLAQVL
1201: VEIPYSLVQS ILCMAILYPM VGYHFSVYKV FWSFYAVFCS LLIFNYFGML LVVITPNIHV AFTLRSGFYS MVNLFAGYVM PKPSIPKWWI WMYYLSPTSW
1301: VLNGLLTSQY GDMEKEIVAF GETKKVSDFV EDYFGFRYDS LALVAIILIA FPILLASLFA FFIDKLNFQK K

Best Arabidopsis Sequence Match ( AT4G15233.7 )
(BLAST)

0001: MTMSQTDGVE FASRNTNENG HDDDDQLRSQ WVAIERSPTF ERITTALFCK RDEKGKKSQR RVMDVSKLDD LDRRLFIDDL IRHVENDNHV LLQKIRKRID
0101: EVGIDLPKIE ARFSDLFVEA ECEVVYGKPI PTLWNAISSK LSRFMCSNQA KKISILKGVS GIIRPKRMTL LLGPPSCGKT TLLLALSGRL DPSLKTRGDI
0201: SYNGHLFSEF VPEKTSSYVS QNDLHIPELS VRETLDFSGC FQGTGSRLEM TKEISRREKL KGIVPDPDID AYMKILGLTI CADTRVGDAS RPGISGGQKR
0301: RLTTGEMIVG PIKTLFMDEI SNGLDSSTTF QILSCLQQFA RLSEGTILVS LLQPAPETFE LFDDLILMGE GKIIYHGPRD FVCSFFEDCG FKCPNRKSVA
0401: EFLQEVISRK DQEQYWCHIE KTYCYVSIES FIEKFKKSDL GLELQDRLSK TYDKSQTQKD GLCFRKYSLS NWDMLKACSR REFLLMKRNS FVYVFKSGLL
0501: IFIGFIAMTV YLRTGSTRDS LHANYLMGSL FFSLFKLLAD GLPELTLTIS RIAVFCKQKE LYFYPAWAYA IPSAILKIPI SFLESFLWTM LTYYVIGYSP
0601: EMGRFIRQFL ILFALHLSCI SMFRAIAAVF RDFVVATTVG SISIVLLSVF GGFIVRKPSM PSWLEWGFWL SPLSYAEIGL TANEFFAPRW GKITSENRTL
0701: GEQVLDARGL NFGNQSYWNA FGALIGFTLF FNTVFALALT FLKTSQRSRV IVSHEKNTQS SENDSKIASR FKNALPFEPL TFTFQDVQYI IETPQGKKLQ
0801: LLSGVTGAFK PGVLTALMGV SGAGKTTLLD VLSGRKTFGD IKGQIEVGGY VKVQDTFSRV SGYCEQFDIH SPNLTVQESL KYSAWLRLTS NISSETKCAI
0901: VNEVLETIEL EEIKDSIVGI PGISGLTTEQ RKRLTIAVEL VSNPSIIFMD EPTTGLDARA AAIVMRAVKN IAETGRTVVC TIHQPSIDIF EAFDELILMK
1001: NGGKIIYYGP LGQHSSKVIE YFMRIHGVPK LKENSNPATW ILDITSKSSE DKLGVDLAQM YEESTLFKEN KMVIEQTRCT SLGSERLILS SRYAQTSWEQ
1101: FKACLWKQHL SYWRNPSYNL TRIIFMSFTC MLCGILFWQK AKEINNQQDL FNVFGSMFTV VLFSGINNCS TVLFSVATER NVFYRERFSR MYNSWAYSLA
1201: QVLVEIPYSL FQSIVYVIIV YPMVGYHWSV FKVFWSFYSI FCTLLIFNYF GMLLVVVTPN VHIAFTLRSS FYAIVNLFAG YVMPKPNIPR WWIWMYYLSP
1301: TSWVLNGLLT SQYGDMEKEI LAFGEKKKVS DFLEDYFGYR YDSLALVAVV LIAFPILLAS LFAFFIGKLN FQKK

Arabidopsis Description

ABCG42ABC transporter G family member 42 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC82]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.