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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY58247 Canola cytosol 90.93 93.22
Bra012797.1-P Field mustard cytosol 91.68 62.66
AT4G15233.1 Thale cress cytosol, peroxisome, plasma membrane 79.08 53.23
CDY55440 Canola cytosol, nucleus, plasma membrane 54.11 52.87
CDY65389 Canola cytosol 4.48 52.5
Os12t0512700-01 Rice cytosol, peroxisome 40.02 49.02
CDY70099 Canola cytosol 22.41 48.84
CDY69102 Canola plastid 39.81 43.78
CDY06512 Canola cytosol, peroxisome, plasma membrane 64.14 43.71
CDY68747 Canola plastid 39.81 43.63
KRH02448 Soybean plasma membrane 60.09 38.77
CDY07588 Canola cytosol, peroxisome, plasma membrane 56.14 36.5
CDY18456 Canola cytosol, nucleus, plasma membrane 54.75 36.49
CDY52757 Canola cytosol, peroxisome, plasma membrane 55.82 36.29
CDX74974 Canola cytosol 54.64 36.23
CDX91350 Canola cytosol, peroxisome, plasma membrane 54.22 35.95
CDX91351 Canola cytosol 45.89 34.79
GSMUA_Achr3P01060_001 Banana plasma membrane 49.73 34.47
Zm00001d023392_P002 Maize cytosol, peroxisome, plasma membrane 54.0 34.38
CDX71718 Canola cytosol 2.03 33.93
TraesCS5D01G163700.1 Wheat cytosol, peroxisome, plasma membrane 52.51 33.81
TraesCS5D01G163500.1 Wheat plasma membrane 52.51 33.81
TraesCS7A01G478500.1 Wheat cytosol, peroxisome, plasma membrane 50.16 33.76
TraesCS7D01G465900.2 Wheat cytosol, peroxisome, plasma membrane 50.05 33.72
TraesCS5A01G158100.1 Wheat plasma membrane 52.19 33.61
GSMUA_Achr1P18390_001 Banana cytosol, nucleus, plasma membrane, plastid 53.79 33.53
TraesCS7B01G381200.2 Wheat plasma membrane 50.8 33.45
TraesCS4B01G054700.1 Wheat cytosol, peroxisome, plasma membrane 51.01 33.29
TraesCS5A01G158300.1 Wheat plasma membrane 51.65 33.22
TraesCS5B01G155400.3 Wheat plasma membrane 50.37 33.01
TraesCS7B01G381000.1 Wheat cytosol, nucleus, plasma membrane 48.88 32.97
CDX74973 Canola cytosol 48.88 32.81
HORVU5Hr1G049490.3 Barley nucleus, plastid 48.56 32.64
TraesCS4A01G384800.1 Wheat cytosol, nucleus, plasma membrane 48.03 32.1
OQU91497 Sorghum cytosol, nucleus, plasma membrane 46.74 31.72
CDX67921 Canola plasma membrane, plastid 46.53 31.37
CDY36534 Canola plastid 48.03 31.36
CDY39621 Canola plastid 48.03 31.34
CDY36570 Canola cytosol, nucleus, plasma membrane, plastid 46.96 31.14
CDX97743 Canola plasma membrane 46.85 31.07
CDY39660 Canola cytosol, nucleus, plasma membrane 46.85 31.02
CDY20193 Canola plasma membrane, plastid 45.78 30.95
CDX83991 Canola plastid 47.6 30.38
CDX97864 Canola cytosol, peroxisome, plasma membrane 45.57 29.88
CDY29713 Canola cytosol, peroxisome, plasma membrane 45.46 29.81
CDX83314 Canola cytosol 44.61 29.42
CDY43723 Canola cytosol, mitochondrion, peroxisome, plasma membrane 45.57 29.39
CDX95741 Canola cytosol 44.5 29.35
CDY48188 Canola cytosol, peroxisome, plasma membrane 44.18 29.15
CDX77057 Canola cytosol, peroxisome, plasma membrane 44.08 29.08
CDX79673 Canola cytosol, peroxisome, plasma membrane 37.89 29.07
CDY64951 Canola cytosol, peroxisome, plasma membrane 42.69 28.99
CDX85303 Canola cytosol 42.58 28.48
CDX84561 Canola cytosol, mitochondrion, peroxisome, plasma membrane 43.65 25.08
CDY30162 Canola plasma membrane 20.28 21.37
CDY69529 Canola plasma membrane 11.53 15.13
Os12t0239900-01 Rice plasma membrane 0.32 4.17
CDY65557 Canola plasma membrane 1.28 3.21
CDY63361 Canola plasma membrane 0.96 2.26
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078JD61UniProt:A0A078JD61InterPro:AAA+_ATPaseInterPro:ABC_2_trans
InterPro:ABC_trans_NInterPro:ABC_transporter-likeEnsemblPlants:CDY65558ProteinID:CDY65558ProteinID:CDY65558.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00046801001InterPro:IPR003439InterPro:P-loop_NTPase
InterPro:PDR_assocPFAM:PF00005PFAM:PF01061PFAM:PF08370PFAM:PF14510PFscan:PS50893
PANTHER:PTHR19241PANTHER:PTHR19241:SF449SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EDDBA8
SEG:seg:::::
Description
BnaCnng47690DBnaCnng47690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JD61]
Coordinates
chrLK034834:+:18161..22215
Molecular Weight (calculated)
105511.0 Da
IEP (calculated)
8.895
GRAVY (calculated)
-0.075
Length
937 amino acids
Sequence
(BLAST)
001: MTTPQIAGDE IGNAGDEEVR SQWAAIERLP TFERITTALF WNRDEQGKRN ETRVMDVSKL EDLDRHLFID DLIRHVEDDN LRLLQKIKNR IDEVGLELPT
101: MEVRFSDLFV EAECEVVYRK PIPTLWNAIA SRISRVMCLK KEKSISILNG VSGIIRPKRM TLLLGPPSCG KTSLLLALAG RLDHSLKTTG NVSYNGHLLS
201: EFVPEKTSNY VSQNDLHIPD ITVRETLDFS GCFQGTGSRL ETMKEISRRE KLKGIVPDPD IDAYMKATSI EGMVTFRSIL GLSFCADTRV GDTSRPGISG
301: GQKRRLTTGQ TIVGPIKTLF MDEISNGLDS STTFQIVSCL QHYALLSEGT IVVSLLQPAP ETFDLFDDVI LMGEGKIIYI GPRDYICRFF EDCGFKCPTR
401: KSVAEFLQEV ISRKDQEQYW CHIDKPYCYV SIDSFIERFK KSELGLQQQE ELSKTHDKSQ AQKDALCSRK YSLSNWEMLK ACSRREFLLM KRNSFVYVFK
501: SGLLICIGSI TMTVYLRTGS KRDVINANYL MGSLFFSIFK MLADGLPELT LTISRLSVFY KQKELYFYPA WAYALPSAIL KIPISFLEAF LWTSLTYYVI
601: GYSPDIGRFF RQFLIFFALH LSCISMFRAI AATFRDFVLA TTVGTVSVVL LSLFGGFVLR KPSMPAWLQW GFWLSPLSYA EIGLTTNEFF STRWSQATSG
701: NRTLGEEVLD ARGLNFGDQS YWSVFGALIG FAFFFNIVFV LALTFLKTSN RSRAIVSGDD NTQSSGNHTK SSSKVASQSK NALPFKSLTF TFQDVCYFVQ
801: TPQGKKVQLL SNVTGAFKPG VLTALMGVSG AGKTTLMDVL SGRKTRGDIE GEIQVGGYRK VQETFARVSG YCEQFDIHSP NLTIEESLEY SAWLRLPSTI
901: NSETKRVSHL SVRIRFGFGS GSVRVRSKKG LKIQKNI
Best Arabidopsis Sequence Match ( AT4G15233.1 )
(BLAST)
0001: MTMSQTDGVE FASRNTNENG HDDDDQLRSQ WVAIERSPTF ERITTALFCK RDEKGKKSQR RVMDVSKLDD LDRRLFIDDL IRHVENDNHV LLQKIRKRID
0101: EVGIDLPKIE ARFSDLFVEA ECEVVYGKPI PTLWNAISSK LSRFMCSNQA KKISILKGVS GIIRPKRMTL LLGPPSCGKT TLLLALSGRL DPSLKTRGDI
0201: SYNGHLFSEF VPEKTSSYVS QNDLHIPELS VRETLDFSGC FQGTGSRLEM TKEISRREKL KGIVPDPDID AYMKAASIEG SKTNLQTDYI LKILGLTICA
0301: DTRVGDASRP GISGGQKRRL TTGEMIVGPI KTLFMDEISN GLDSSTTFQI LSCLQQFARL SEGTILVSLL QPAPETFELF DDLILMGEGK IIYHGPRDFV
0401: CSFFEDCGFK CPNRKSVAEF LQEVISRKDQ EQYWCHIEKT YCYVSIESFI EKFKKSDLGL ELQDRLSKTY DKSQTQKDGL CFRKYSLSNW DMLKACSRRE
0501: FLLMKRNSFV YVFKSGLLIF IGFIAMTVYL RTGSTRDSLH ANYLMGSLFF SLFKLLADGL PELTLTISRI AVFCKQKELY FYPAWAYAIP SAILKIPISF
0601: LESFLWTMLT YYVIGYSPEM GRFIRQFLIL FALHLSCISM FRAIAAVFRD FVVATTVGSI SIVLLSVFGG FIVRKPSMPS WLEWGFWLSP LSYAEIGLTA
0701: NEFFAPRWGK ITSENRTLGE QVLDARGLNF GNQSYWNAFG ALIGFTLFFN TVFALALTFL KTSQRSRVIV SHEKNTQSSE NDSKIASRFK NALPFEPLTF
0801: TFQDVQYIIE TPQGKKLQLL SGVTGAFKPG VLTALMGVSG AGKTTLLDVL SGRKTFGDIK GQIEVGGYVK VQDTFSRVSG YCEQFDIHSP NLTVQESLKY
0901: SAWLRLTSNI SSETKCAIVN EVLETIELEE IKDSIVGIPG ISGLTTEQRK RLTIAVELVS NPSIIFMDEP TTGLDARAAA IVMRAVKNIA ETGRTVVCTI
1001: HQPSIDIFEA FDELILMKNG GKIIYYGPLG QHSSKVIEYF MRIHGVPKLK ENSNPATWIL DITSKSSEDK LGVDLAQMYE ESTLFKENKM VIEQTRCTSL
1101: GSERLILSSR YAQTSWEQFK ACLWKQHLSY WRNPSYNLTR IIFMSFTCML CGILFWQKAK EINNQQDLFN VFGSMFTVVL FSGINNCSTV LFSVATERNV
1201: FYRERFSRMY NSWAYSLAQV LVEIPYSLFQ SIVYVIIVYP MVGYHWSVFK VFWSFYSIFC TLLIFNYFGM LLVVVTPNVH IAFTLRSSFY AIVNLFAGYV
1301: MPKPNIPRWW IWMYYLSPTS WVLNGLLTSQ YGDMEKEILA FGEKKKVSDF LEDYFGYRYD SLALVAVVLI AFPILLASLF AFFIGKLNFQ KK
Arabidopsis Description
ABCG42ABC transporter G family member 42 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC82]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.