Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025424.1-P | Field mustard | cytosol, nucleus, plasma membrane | 99.49 | 98.0 |
| CDX85303 | Canola | cytosol | 97.97 | 96.5 |
| AT3G30842.1 | Thale cress | cytosol | 82.97 | 80.75 |
| CDY65389 | Canola | cytosol | 3.41 | 58.75 |
| GSMUA_Achr5P06180_001 | Banana | plasma membrane | 54.35 | 53.88 |
| GSMUA_AchrUn_... | Banana | mitochondrion, plasma membrane | 54.93 | 53.76 |
| Zm00001d053612_P003 | Maize | mitochondrion, plasma membrane | 56.16 | 53.71 |
| CDY36570 | Canola | cytosol, nucleus, plasma membrane, plastid | 54.93 | 53.64 |
| EES04729 | Sorghum | mitochondrion | 55.8 | 53.4 |
| CDY39660 | Canola | cytosol, nucleus, plasma membrane | 54.71 | 53.36 |
| TraesCS6B01G205900.1 | Wheat | plasma membrane | 54.86 | 52.42 |
| TraesCS6A01G178500.1 | Wheat | plasma membrane | 54.93 | 52.35 |
| TraesCS6D01G166100.1 | Wheat | plasma membrane | 54.86 | 52.28 |
| HORVU6Hr1G036800.21 | Barley | plasma membrane | 54.57 | 52.0 |
| EES08826 | Sorghum | mitochondrion | 53.19 | 51.15 |
| Zm00001d048860_P001 | Maize | cytosol, nucleus, plasma membrane | 52.83 | 50.41 |
| CDY70099 | Canola | cytosol | 15.65 | 50.23 |
| CDX79673 | Canola | cytosol, peroxisome, plasma membrane | 44.2 | 49.96 |
| CDY69529 | Canola | plasma membrane | 25.14 | 48.6 |
| CDX67921 | Canola | plasma membrane, plastid | 48.7 | 48.35 |
| CDX77057 | Canola | cytosol, peroxisome, plasma membrane | 49.71 | 48.31 |
| CDY48188 | Canola | cytosol, peroxisome, plasma membrane | 49.64 | 48.24 |
| CDY43723 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 50.51 | 47.97 |
| CDX97743 | Canola | plasma membrane | 48.62 | 47.49 |
| CDY36534 | Canola | plastid | 49.13 | 47.25 |
| CDY39621 | Canola | plastid | 48.77 | 46.87 |
| CDY30162 | Canola | plasma membrane | 30.07 | 46.68 |
| CDY20193 | Canola | plasma membrane, plastid | 46.74 | 46.54 |
| CDX83991 | Canola | plastid | 48.26 | 45.37 |
| CDY55440 | Canola | cytosol, nucleus, plasma membrane | 31.38 | 45.15 |
| CDX83314 | Canola | cytosol | 46.38 | 45.04 |
| CDY18456 | Canola | cytosol, nucleus, plasma membrane | 45.87 | 45.02 |
| CDX74974 | Canola | cytosol | 45.94 | 44.87 |
| CDX95741 | Canola | cytosol | 46.16 | 44.83 |
| CDX97864 | Canola | cytosol, peroxisome, plasma membrane | 46.38 | 44.79 |
| CDY29713 | Canola | cytosol, peroxisome, plasma membrane | 46.23 | 44.65 |
| CDX91350 | Canola | cytosol, peroxisome, plasma membrane | 45.51 | 44.44 |
| CDY07588 | Canola | cytosol, peroxisome, plasma membrane | 46.3 | 44.34 |
| CDY52757 | Canola | cytosol, peroxisome, plasma membrane | 46.3 | 44.34 |
| CDY58247 | Canola | cytosol | 29.06 | 43.87 |
| CDY06512 | Canola | cytosol, peroxisome, plasma membrane | 43.62 | 43.78 |
| CDY65558 | Canola | cytosol | 28.99 | 42.69 |
| CDX84561 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 49.93 | 42.24 |
| CDX91351 | Canola | cytosol | 37.54 | 41.91 |
| CDX74973 | Canola | cytosol | 42.1 | 41.62 |
| CDY69102 | Canola | plastid | 25.65 | 41.55 |
| CDY68747 | Canola | plastid | 25.72 | 41.52 |
| CDY63361 | Canola | plasma membrane | 11.96 | 41.46 |
| CDY65557 | Canola | plasma membrane | 10.14 | 37.43 |
| CDX71718 | Canola | cytosol | 1.3 | 32.14 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | GO:A0A078JGY4 | UniProt:A0A078JGY4 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_1 |
| InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans | InterPro:ABC_trans_N | InterPro:ABC_transporter-like | EnsemblPlants:CDY64951 | ProteinID:CDY64951 |
| ProteinID:CDY64951.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 |
| EnsemblPlantsGene:GSBRNA2T00043902001 | InterPro:IPR003439 | InterPro:P-loop_NTPase | InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 |
| PFAM:PF08370 | PFAM:PF14510 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF446 | SMART:SM00382 |
| SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0004EE7696 | SEG:seg | : | : |
Description
BnaA06g39700DBnaA06g39700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGY4]
Coordinates
chrLK034607:-:11212..17589
Molecular Weight (calculated)
156651.0 Da
IEP (calculated)
9.051
GRAVY (calculated)
-0.021
Length
1380 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAHYRAGSEI ENVLNDINTS RREKEEDEDE AMKWAALERL PTHDRVSKAM LRGITGGFKE IDMKDLSLEE RRELFDRVVA MNDDDWHGFY LRRLKRRTDR
0101: VSLKLPTIEV RFENVNVTTE ASKGSRAVPT VINSYVSVAK GVATKIGVRR SKKATISILK DVSGIIKPGR LTLLLGPPGS GKSTLLKALS GKIESGLKCT
0201: GKVTYNGHEM HEFVPERTAA YIGQYDVHMP KLTVRETLKF SAKCQGVGTG YDMLEELLRR EKKFNIKPDP YLDALMKASV IKEHKENVVT DYVLKLLGLE
0301: TCADTIVGDH MERGISGGQK KRVTTGEMLV GPVGAYFMDN ISDGLDSSTT FQIVKCIKQM IQVFDKTALV SLLQPPPETF ELFDDVIILG EGRIIYQGPR
0401: EDVLGFFESM GFKCPERKGV ADYLQEILSR KDQEQYWANP DLPYHYVSAK KFEEGFRTYH LWSTISSQLA TPFDRKKNHR AALTKTRYGA RKMDLLKACL
0501: AREHILMKRN FKIFGLKSFQ LIFNAITISI VFSTQREYHN TIEDGIIYMG AIYLEIQMIV FSGFFELPMT IDKLPVFYKQ RRFSFYPSWA FSLPASVINF
0601: PISFAEVLIV VFITYYSIGY DPTITSFLKH YLILALCGQM SYGFFRCIAA VTRNHVVANT MGCLAVMWLM TFSGYVLSRD QVHKWLAWAY WTSPFMYIQT
0701: AVSVNEFRSK SWKDGLGVAI LKSRGFFVET YWYWIGLLAL IIATTLSNIV TSLCLAFLKQ YGVSKSAVLR DECEEADSNA YSSVATKRTS NDKKLRIPFK
0801: PLYITFENIM YSVDTPNEMK KRGIKDEKLV LLNGLSGAFR PGHLTALMGM SGAGKTTLMD VLAGRKNTGY ITGDINVSGF PKKQDSFARI SGYCEQFGIH
0901: SPLLTVYESL LYSAWLRLPP NIDESTRELF IEEVMELIEL EPLRGMLVGY VGISGLSTEQ RKRMTIAVEL VANPSILFMD EPTSGLDARA AAIVMRTVRN
1001: TVDTGRTVVC TIHQPSIDIF ESFDELFLLA RGGEEIYVGP IGHNSSQLIE YFEGIRGVSK IKEGYNPATW ALEVTTREQE DVLGVKFAQE YKNSNLYKRN
1101: KDLIKELNKF QACLWKLHKS YWRNVPYNAV RLCFAAAVGI LYGIIFWSLG KRMGTREDIY NSVGAMSIII GFLGSQSAAT VRPVAIAERT VFYRETVAGM
1201: YSALPYAFSQ VIIEIPYTMA KACIVSTIVY GMIGYEWTAS KFFLYTFFNF ITIIYYIYTG FMLIAVSPNQ ETAAILNGII STTLNVFSGF TIPRPRMPVW
1301: LRWFPYVSPA WWGLYGLTIS QYGDVETRLD TGETVKEFMK NYYGYEHDFL WKVSLVLISF CLLFAFIYAL SVKTLNFQKR
0101: VSLKLPTIEV RFENVNVTTE ASKGSRAVPT VINSYVSVAK GVATKIGVRR SKKATISILK DVSGIIKPGR LTLLLGPPGS GKSTLLKALS GKIESGLKCT
0201: GKVTYNGHEM HEFVPERTAA YIGQYDVHMP KLTVRETLKF SAKCQGVGTG YDMLEELLRR EKKFNIKPDP YLDALMKASV IKEHKENVVT DYVLKLLGLE
0301: TCADTIVGDH MERGISGGQK KRVTTGEMLV GPVGAYFMDN ISDGLDSSTT FQIVKCIKQM IQVFDKTALV SLLQPPPETF ELFDDVIILG EGRIIYQGPR
0401: EDVLGFFESM GFKCPERKGV ADYLQEILSR KDQEQYWANP DLPYHYVSAK KFEEGFRTYH LWSTISSQLA TPFDRKKNHR AALTKTRYGA RKMDLLKACL
0501: AREHILMKRN FKIFGLKSFQ LIFNAITISI VFSTQREYHN TIEDGIIYMG AIYLEIQMIV FSGFFELPMT IDKLPVFYKQ RRFSFYPSWA FSLPASVINF
0601: PISFAEVLIV VFITYYSIGY DPTITSFLKH YLILALCGQM SYGFFRCIAA VTRNHVVANT MGCLAVMWLM TFSGYVLSRD QVHKWLAWAY WTSPFMYIQT
0701: AVSVNEFRSK SWKDGLGVAI LKSRGFFVET YWYWIGLLAL IIATTLSNIV TSLCLAFLKQ YGVSKSAVLR DECEEADSNA YSSVATKRTS NDKKLRIPFK
0801: PLYITFENIM YSVDTPNEMK KRGIKDEKLV LLNGLSGAFR PGHLTALMGM SGAGKTTLMD VLAGRKNTGY ITGDINVSGF PKKQDSFARI SGYCEQFGIH
0901: SPLLTVYESL LYSAWLRLPP NIDESTRELF IEEVMELIEL EPLRGMLVGY VGISGLSTEQ RKRMTIAVEL VANPSILFMD EPTSGLDARA AAIVMRTVRN
1001: TVDTGRTVVC TIHQPSIDIF ESFDELFLLA RGGEEIYVGP IGHNSSQLIE YFEGIRGVSK IKEGYNPATW ALEVTTREQE DVLGVKFAQE YKNSNLYKRN
1101: KDLIKELNKF QACLWKLHKS YWRNVPYNAV RLCFAAAVGI LYGIIFWSLG KRMGTREDIY NSVGAMSIII GFLGSQSAAT VRPVAIAERT VFYRETVAGM
1201: YSALPYAFSQ VIIEIPYTMA KACIVSTIVY GMIGYEWTAS KFFLYTFFNF ITIIYYIYTG FMLIAVSPNQ ETAAILNGII STTLNVFSGF TIPRPRMPVW
1301: LRWFPYVSPA WWGLYGLTIS QYGDVETRLD TGETVKEFMK NYYGYEHDFL WKVSLVLISF CLLFAFIYAL SVKTLNFQKR
0001: MAHYRVSSEV ENIMNRDRSH RKNEEEDEEE ALKLAAMEKL QRLPTYDRAR KAVLKGITGG FKEIDMKDLG LAERRELFDR VMTMDDEDWH GEYLRRLKSR
0101: FDRVSLHLPT IEVRFEDLNV TAEAYAGSKT VPTVLNSYVN LLKGIGTKIR VLPDRKKRIS ILNDVSGIIK PGRLTLLLGP PGSGKSTLLK ALSGKTETGL
0201: RSTGKVTYNG HELHEFVPER TAGYIDQYDV HLPDLTVRET LKFSAKCQGV GTGYDMLAEL LRREKDLNIK PDPYLDALMK ASVIKGHKEY VVTDYVLKVL
0301: GLEICADTIV GNHMKRGISG GQKKRVTTGE MLVGPVGAFF MDNISDGLDS STTFQIVKSI KQMIHVFDKT ALISLLQPPP ETFELFDDVI ILGEGHIVYQ
0401: GPREDVLEFF EFMGFKCPER KGIADYLQEI LSKKDQEQYW ANPELPYRYV TAKKFEEGFK IHHFGRAMRS QLATPFDRLK NHRAALTRTT YGASKLELLK
0501: ACLERESILM KRNLRTFVLK SLQLIINAIL IGVVFWQQKN YPSTVEDGII YMGAIYLEVQ MIVFSGFFEL PMTIDKLPVF YKQRHFSFYP SWAFSLPTSI
0601: ITFPLSFVEV FIVVLITYFT IGYDLTVPSF LKHYLVLALC GQMSYGLFRC IAAVTRNHVV SNTMGCLAVM WLMTFSGYVL SRNQVHKWLT WAYWTSPMMY
0701: IQTAVSVNEF RSESWKDGLG VAVLKSRGFF VETYWYWIGL LALILSTILS NIITSLCLAF LKQYGISKTA VLPDEREEAD SNNTTGRDYT GTTMERFFDR
0801: VVTTRTCNDK KLRIPFKPLY MTFENITYSV DTPKEMKEKG IRENKLVLLN GLSGAFRPGV LTALMGVSGA GKTTLMDVLA GRKNTGYIQG EIYVSGFPKK
0901: QDSFARVSGY CEQSDIHSPL LTVYESLLYS AWLRLPPDID THTRELFIEE VMELIELKAL REMLVGYVGI SGLSTEQRKR MTIAVELVAN PSILFMDEPT
1001: SGLDARAAAI VMRTVRNTVD TGRTVVCTIH QPSIDIFESF DELFLLTRGG EEIYVGPIGH HSSQLIEYFE GIRGVGKIKE GYNPATWALE VTTRAQEDVL
1101: GVTFAQVYKK SNLYRRNKDL IKELNNIPPH AQDIHFSTKY SQSYLSQFQA CLWKQHKSYW RNVPYNAVRF SFGAAVGIMY GIIFWSLGKR KGTRQDIFNS
1201: VGAMSTVVGF LSSQSAATVR PVVIAERTVF YREAGAGMYS ALPYAFSQVI IEIPYTMAQA CIYGVIVYGM IGYEWTASKF FLNIFFTFIS ILYSIYTGIM
1301: VISVSPNQEI ASILNGVIST SWNVFSGFTI PRPRMHVWLR WFTYVCPGWW GLYGLTIAQY GDVETRLDTG ETVVEFMKNY YGYEYNFLWV VSLTLIAFSM
1401: FFVFIYAFSV KILNFQKR
0101: FDRVSLHLPT IEVRFEDLNV TAEAYAGSKT VPTVLNSYVN LLKGIGTKIR VLPDRKKRIS ILNDVSGIIK PGRLTLLLGP PGSGKSTLLK ALSGKTETGL
0201: RSTGKVTYNG HELHEFVPER TAGYIDQYDV HLPDLTVRET LKFSAKCQGV GTGYDMLAEL LRREKDLNIK PDPYLDALMK ASVIKGHKEY VVTDYVLKVL
0301: GLEICADTIV GNHMKRGISG GQKKRVTTGE MLVGPVGAFF MDNISDGLDS STTFQIVKSI KQMIHVFDKT ALISLLQPPP ETFELFDDVI ILGEGHIVYQ
0401: GPREDVLEFF EFMGFKCPER KGIADYLQEI LSKKDQEQYW ANPELPYRYV TAKKFEEGFK IHHFGRAMRS QLATPFDRLK NHRAALTRTT YGASKLELLK
0501: ACLERESILM KRNLRTFVLK SLQLIINAIL IGVVFWQQKN YPSTVEDGII YMGAIYLEVQ MIVFSGFFEL PMTIDKLPVF YKQRHFSFYP SWAFSLPTSI
0601: ITFPLSFVEV FIVVLITYFT IGYDLTVPSF LKHYLVLALC GQMSYGLFRC IAAVTRNHVV SNTMGCLAVM WLMTFSGYVL SRNQVHKWLT WAYWTSPMMY
0701: IQTAVSVNEF RSESWKDGLG VAVLKSRGFF VETYWYWIGL LALILSTILS NIITSLCLAF LKQYGISKTA VLPDEREEAD SNNTTGRDYT GTTMERFFDR
0801: VVTTRTCNDK KLRIPFKPLY MTFENITYSV DTPKEMKEKG IRENKLVLLN GLSGAFRPGV LTALMGVSGA GKTTLMDVLA GRKNTGYIQG EIYVSGFPKK
0901: QDSFARVSGY CEQSDIHSPL LTVYESLLYS AWLRLPPDID THTRELFIEE VMELIELKAL REMLVGYVGI SGLSTEQRKR MTIAVELVAN PSILFMDEPT
1001: SGLDARAAAI VMRTVRNTVD TGRTVVCTIH QPSIDIFESF DELFLLTRGG EEIYVGPIGH HSSQLIEYFE GIRGVGKIKE GYNPATWALE VTTRAQEDVL
1101: GVTFAQVYKK SNLYRRNKDL IKELNNIPPH AQDIHFSTKY SQSYLSQFQA CLWKQHKSYW RNVPYNAVRF SFGAAVGIMY GIIFWSLGKR KGTRQDIFNS
1201: VGAMSTVVGF LSSQSAATVR PVVIAERTVF YREAGAGMYS ALPYAFSQVI IEIPYTMAQA CIYGVIVYGM IGYEWTASKF FLNIFFTFIS ILYSIYTGIM
1301: VISVSPNQEI ASILNGVIST SWNVFSGFTI PRPRMHVWLR WFTYVCPGWW GLYGLTIAQY GDVETRLDTG ETVVEFMKNY YGYEYNFLWV VSLTLIAFSM
1401: FFVFIYAFSV KILNFQKR
Arabidopsis Description
ABCG38ABC transporter G family member 38 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC85]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.