Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74974 | Canola | cytosol | 98.02 | 98.02 |
| CDY18456 | Canola | cytosol, nucleus, plasma membrane | 87.97 | 88.41 |
| CDY55440 | Canola | cytosol, nucleus, plasma membrane | 59.31 | 87.38 |
| CDX91351 | Canola | cytosol | 75.94 | 86.81 |
| CDX74973 | Canola | cytosol | 84.85 | 85.89 |
| CDY07588 | Canola | cytosol, peroxisome, plasma membrane | 79.76 | 78.21 |
| CDY52757 | Canola | cytosol, peroxisome, plasma membrane | 79.48 | 77.93 |
| VIT_14s0060g00470.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 67.23 | 65.61 |
| Solyc01g101070.2.1 | Tomato | plastid | 65.82 | 64.27 |
| PGSC0003DMT400046986 | Potato | plasma membrane | 40.48 | 64.27 |
| CDY65389 | Canola | cytosol | 3.33 | 58.75 |
| GSMUA_Achr3P01060_001 | Banana | plasma membrane | 56.12 | 58.65 |
| CDY63361 | Canola | plasma membrane | 16.35 | 58.04 |
| TraesCS5D01G163500.1 | Wheat | plasma membrane | 58.81 | 57.11 |
| TraesCS5A01G158300.1 | Wheat | plasma membrane | 58.81 | 57.03 |
| Zm00001d023392_P002 | Maize | cytosol, peroxisome, plasma membrane | 59.38 | 57.0 |
| TraesCS5D01G163700.1 | Wheat | cytosol, peroxisome, plasma membrane | 58.67 | 56.98 |
| CDY06512 | Canola | cytosol, peroxisome, plasma membrane | 55.41 | 56.95 |
| TraesCS5A01G158100.1 | Wheat | plasma membrane | 58.6 | 56.91 |
| Os12t0512700-01 | Rice | cytosol, peroxisome | 30.79 | 56.86 |
| CDY58247 | Canola | cytosol | 36.73 | 56.78 |
| TraesCS4B01G054700.1 | Wheat | cytosol, peroxisome, plasma membrane | 57.68 | 56.75 |
| TraesCS7D01G465900.2 | Wheat | cytosol, peroxisome, plasma membrane | 55.77 | 56.65 |
| TraesCS5B01G155400.3 | Wheat | plasma membrane | 56.83 | 56.15 |
| GSMUA_Achr1P18390_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 59.59 | 56.02 |
| HORVU5Hr1G049490.3 | Barley | nucleus, plastid | 55.2 | 55.95 |
| TraesCS7A01G478500.1 | Wheat | cytosol, peroxisome, plasma membrane | 55.06 | 55.89 |
| TraesCS7B01G381200.2 | Wheat | plasma membrane | 56.05 | 55.66 |
| CDY65557 | Canola | plasma membrane | 14.65 | 55.35 |
| TraesCS7B01G381000.1 | Wheat | cytosol, nucleus, plasma membrane | 54.35 | 55.29 |
| OQU91497 | Sorghum | cytosol, nucleus, plasma membrane | 53.64 | 54.89 |
| TraesCS4A01G384800.1 | Wheat | cytosol, nucleus, plasma membrane | 54.07 | 54.49 |
| CDY65558 | Canola | cytosol | 35.95 | 54.22 |
| CDY70099 | Canola | cytosol | 16.49 | 54.19 |
| CDX97743 | Canola | plasma membrane | 51.73 | 51.73 |
| CDY69529 | Canola | plasma membrane | 26.11 | 51.68 |
| CDY39621 | Canola | plastid | 52.16 | 51.32 |
| CDX67921 | Canola | plasma membrane, plastid | 50.46 | 51.3 |
| CDY36534 | Canola | plastid | 51.95 | 51.15 |
| CDX79673 | Canola | cytosol, peroxisome, plasma membrane | 44.09 | 51.02 |
| CDY30162 | Canola | plasma membrane | 31.78 | 50.51 |
| CDY20193 | Canola | plasma membrane, plastid | 49.54 | 50.51 |
| CDY36570 | Canola | cytosol, nucleus, plasma membrane, plastid | 50.18 | 50.18 |
| CDY39660 | Canola | cytosol, nucleus, plasma membrane | 50.04 | 49.96 |
| CDX83991 | Canola | plastid | 51.31 | 49.39 |
| CDY43723 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 49.75 | 48.38 |
| CDY48188 | Canola | cytosol, peroxisome, plasma membrane | 48.05 | 47.82 |
| CDX77057 | Canola | cytosol, peroxisome, plasma membrane | 48.05 | 47.82 |
| CDX97864 | Canola | cytosol, peroxisome, plasma membrane | 47.84 | 47.31 |
| CDY29713 | Canola | cytosol, peroxisome, plasma membrane | 47.77 | 47.24 |
| CDX95741 | Canola | cytosol | 47.42 | 47.15 |
| CDX83314 | Canola | cytosol | 47.42 | 47.15 |
| CDY68747 | Canola | plastid | 28.17 | 46.55 |
| CDY69102 | Canola | plastid | 27.95 | 46.36 |
| CDY64951 | Canola | cytosol, peroxisome, plasma membrane | 44.44 | 45.51 |
| CDX85303 | Canola | cytosol | 44.94 | 45.32 |
| Os12t0239900-01 | Rice | plasma membrane | 2.26 | 44.44 |
| CDX84561 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 48.76 | 42.24 |
| CDX71718 | Canola | cytosol | 1.49 | 37.5 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | GO:A0A078DPS8 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_1 | InterPro:ABCG_PDR_2 |
| InterPro:ABC_2_trans | InterPro:ABC_trans_N | InterPro:ABC_transporter-like | EnsemblPlants:CDX91350 | ProteinID:CDX91350 | ProteinID:CDX91350.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | EnsemblPlantsGene:GSBRNA2T00152638001 | InterPro:IPR003439 | InterPro:P-loop_NTPase |
| InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 | PFscan:PS50893 |
| PANTHER:PTHR19241 | PANTHER:PTHR19241:SF259 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0004EF1EE8 |
| SEG:seg | : | : | : | : | : |
Description
BnaC04g08000D
Coordinates
chrLK031867:+:168346..175077
Molecular Weight (calculated)
160014.0 Da
IEP (calculated)
8.532
GRAVY (calculated)
0.066
Length
1413 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDGEELRMEL SEIKKSTGTS FRSSSSSSNE HAAEAEYALQ WAEIQRLPTF KRLRSSLKGK KVADVTKLGA MERHLMIENL IKHIENDNLK LLKKIRKRMD
0101: RVGVEFPSIE VRYEHLSVEA KCEVVEGKAL PTLWNSLKRV FLEMVKLSGI RTREAKIRIL NDVNGIINPG RLTLLLGPPG CGKTTLLKAL SGNLDKNLKR
0201: SGEISYSGHQ LNEFVPQKTS AYISQQDLHI AEMTVRETID FSARCQGVAS RTDIMMEVSK RENDAGIIPD PEVDAYMKAI SVKGLKKNLQ TDYILKVLGL
0301: DICAETLVGN AMKRGISGGQ KKRLTTAEMI VGPTKALFMD EITNGLDSST AFQIVKSLQQ LAHITDATVL VSLLQPAPES YDLFDDIVLM DKGKIVYHGP
0401: RDLVLNFFEE CGFRCPERKG VADFLQEVIS KKDQRQYWMH QDLPYRFVPV DTFSKRFKDL EIGRKLEEAL SKPYDKSKPH KDALSSKAYS LPKWELFRAC
0501: ISREFLLMKR NYFVYLFKTF QLVLSAIITM TVFIRTRMGI DIVHGNSYMS CLFFGITVLM IDGIPEISMT VQRLAVFYKQ KQLCFYPAWA YAIPATVLKV
0601: PLSFIESLVW TCLTYYVIGY TPEVSRFLRQ FIMLFAVHFT SISMFRCIAS IFQTGVASMA AGSFAILATF VFAGFAIPYT DMPGWLKWGF WVNPISYAEI
0701: GLSVNEFLAP RWQQMQPTNV TLGRTILESR GLNYDDYMYW VSLGALLGQT IIFNIIFTLA LSFLKSPTTS RAMISQEKLL ELQGTKDSSV KQNKLIETNE
0801: DSGKMVLPFK PLTITFQDLN YYVDVPVMRG QGYAEKKLQL LSNITGAFRP GVLTALMGIS GAGKTTLLDV LAGRKTSGYI EGDIKISGYR KVQETFARVS
0901: GYCEQTDIHS PNITVEESLI YSAWLRLVPE IDPETKIRFV KQVLETIELE EIKDAMVGVA GQSGLSTEQR KRLTVAVELV ANPSIIFMDE PTTGLDARAA
1001: AIVMRAVKNV AETGRTIVCT IHQPSIDIFE AFDELVLLKR GGRMIYTGPL GQHSSHVIKY FESIPGATKI KDNYNPATWM LEVTSQSIET ELNIDFAKIY
1101: NESDLYKSNS ELAAELSKPD TGSTDLHFDR TFAQSWWGQF KSCLWKMSLS YWRSPSYNLM RIGHTLISSL IFGVLFWKQG QKIDTQQNLF TVLGAIYGLV
1201: LFLGVNNCTS ALQYFETERN VMYRERFAGM YSAFAYALAQ VVTEVPYIFI QSAEFVIVIY PMMGLYASAY KVFWSLYSMF CNLLCLNYLA MFLISVTPNF
1301: MVAAILQSLF FVAFNLFAGF LIPLPQIPKW WVWLYYLAPT SWTLNVFFSS QYGDIHETID AFGESTTVAR FLEDYFGFHH DRLIFSAIIL IAFPIALASM
1401: FAFFVAKLNF QKR
0101: RVGVEFPSIE VRYEHLSVEA KCEVVEGKAL PTLWNSLKRV FLEMVKLSGI RTREAKIRIL NDVNGIINPG RLTLLLGPPG CGKTTLLKAL SGNLDKNLKR
0201: SGEISYSGHQ LNEFVPQKTS AYISQQDLHI AEMTVRETID FSARCQGVAS RTDIMMEVSK RENDAGIIPD PEVDAYMKAI SVKGLKKNLQ TDYILKVLGL
0301: DICAETLVGN AMKRGISGGQ KKRLTTAEMI VGPTKALFMD EITNGLDSST AFQIVKSLQQ LAHITDATVL VSLLQPAPES YDLFDDIVLM DKGKIVYHGP
0401: RDLVLNFFEE CGFRCPERKG VADFLQEVIS KKDQRQYWMH QDLPYRFVPV DTFSKRFKDL EIGRKLEEAL SKPYDKSKPH KDALSSKAYS LPKWELFRAC
0501: ISREFLLMKR NYFVYLFKTF QLVLSAIITM TVFIRTRMGI DIVHGNSYMS CLFFGITVLM IDGIPEISMT VQRLAVFYKQ KQLCFYPAWA YAIPATVLKV
0601: PLSFIESLVW TCLTYYVIGY TPEVSRFLRQ FIMLFAVHFT SISMFRCIAS IFQTGVASMA AGSFAILATF VFAGFAIPYT DMPGWLKWGF WVNPISYAEI
0701: GLSVNEFLAP RWQQMQPTNV TLGRTILESR GLNYDDYMYW VSLGALLGQT IIFNIIFTLA LSFLKSPTTS RAMISQEKLL ELQGTKDSSV KQNKLIETNE
0801: DSGKMVLPFK PLTITFQDLN YYVDVPVMRG QGYAEKKLQL LSNITGAFRP GVLTALMGIS GAGKTTLLDV LAGRKTSGYI EGDIKISGYR KVQETFARVS
0901: GYCEQTDIHS PNITVEESLI YSAWLRLVPE IDPETKIRFV KQVLETIELE EIKDAMVGVA GQSGLSTEQR KRLTVAVELV ANPSIIFMDE PTTGLDARAA
1001: AIVMRAVKNV AETGRTIVCT IHQPSIDIFE AFDELVLLKR GGRMIYTGPL GQHSSHVIKY FESIPGATKI KDNYNPATWM LEVTSQSIET ELNIDFAKIY
1101: NESDLYKSNS ELAAELSKPD TGSTDLHFDR TFAQSWWGQF KSCLWKMSLS YWRSPSYNLM RIGHTLISSL IFGVLFWKQG QKIDTQQNLF TVLGAIYGLV
1201: LFLGVNNCTS ALQYFETERN VMYRERFAGM YSAFAYALAQ VVTEVPYIFI QSAEFVIVIY PMMGLYASAY KVFWSLYSMF CNLLCLNYLA MFLISVTPNF
1301: MVAAILQSLF FVAFNLFAGF LIPLPQIPKW WVWLYYLAPT SWTLNVFFSS QYGDIHETID AFGESTTVAR FLEDYFGFHH DRLIFSAIIL IAFPIALASM
1401: FAFFVAKLNF QKR
0001: MGSSFRSSSS RNEHEDGGDE AEHALQWAEI QRLPTFKRLR SSLVDKYGEG TEKGKKVVDV TKLGAMERHL MIEKLIKHIE NDNLKLLKKI RRRMERVGVE
0101: FPSIEVRYEH LGVEAACEVV EGKALPTLWN SLKHVFLDLL KLSGVRTNEA NIKILTDVSG IISPGRLTLL LGPPGCGKTT LLKALSGNLE NNLKCYGEIS
0201: YNGHGLNEVV PQKTSAYISQ HDLHIAEMTT RETIDFSARC QGVGSRTDIM MEVSKREKDG GIIPDPEIDA YMKAISVKGL KRSLQTDYIL KILGLDICAE
0301: TLVGNAMKRG ISGGQKKRLT TAEMIVGPTK ALFMDEITNG LDSSTAFQII KSLQQVAHIT NATVFVSLLQ PAPESYDLFD DIVLMAEGKI VYHGPRDDVL
0401: KFFEECGFQC PERKGVADFL QEVISKKDQG QYWLHQNLPH SFVSVDTLSK RFKDLEIGRK IEEALSKPYD ISKTHKDALS FNVYSLPKWE LFRACISREF
0501: LLMKRNYFVY LFKTFQLVLA AIITMTVFIR TRMDIDIIHG NSYMSCLFFA TVVLLVDGIP ELSMTVQRLS VFYKQKQLCF YPAWAYAIPA TVLKIPLSFF
0601: ESLVWTCLTY YVIGYTPEPY RFFRQFMILF AVHFTSISMF RCIAAIFQTG VAAMTAGSFV MLITFVFAGF AIPYTDMPGW LKWGFWVNPI SYAEIGLSVN
0701: EFLAPRWQKM QPTNVTLGRT ILESRGLNYD DYMYWVSLSA LLGLTIIFNT IFTLALSFLK SPTSSRPMIS QDKLSELQGT KDSSVKKNKP LDSSIKTNED
0801: PGKMILPFKP LTITFQDLNY YVDVPVEMKG QGYNEKKLQL LSEITGAFRP GVLTALMGIS GAGKTTLLDV LAGRKTSGYI EGEIRISGFL KVQETFARVS
0901: GYCEQTDIHS PSITVEESLI YSAWLRLVPE INPQTKIRFV KQVLETIELE EIKDALVGVA GVSGLSTEQR KRLTVAVELV ANPSIIFMDE PTTGLDARAA
1001: AIVMRAVKNV AETGRTIVCT IHQPSIHIFE AFDELVLLKR GGRMIYSGPL GQHSSCVIEY FQNIPGVAKI RDKYNPATWM LEVTSESVET ELDMDFAKIY
1101: NESDLYKNNS ELVKELSKPD HGSSDLHFKR TFAQNWWEQF KSCLWKMSLS YWRSPSYNLM RIGHTFISSF IFGLLFWNQG KKIDTQQNLF TVLGAIYGLV
1201: LFVGINNCTS ALQYFETERN VMYRERFAGM YSAFAYALAQ VVTEIPYIFI QSAEFVIVIY PMIGFYASFS KVFWSLYAMF CNLLCFNYLA MFLISITPNF
1301: MVAAILQSLF FTTFNIFAGF LIPKPQIPKW WVWFYYITPT SWTLNLFFSS QYGDIHQKIN AFGETKTVAS FLEDYFGFHH DRLMITAIIL IAFPIALATM
1401: YAFFVAKLNF QKR
0101: FPSIEVRYEH LGVEAACEVV EGKALPTLWN SLKHVFLDLL KLSGVRTNEA NIKILTDVSG IISPGRLTLL LGPPGCGKTT LLKALSGNLE NNLKCYGEIS
0201: YNGHGLNEVV PQKTSAYISQ HDLHIAEMTT RETIDFSARC QGVGSRTDIM MEVSKREKDG GIIPDPEIDA YMKAISVKGL KRSLQTDYIL KILGLDICAE
0301: TLVGNAMKRG ISGGQKKRLT TAEMIVGPTK ALFMDEITNG LDSSTAFQII KSLQQVAHIT NATVFVSLLQ PAPESYDLFD DIVLMAEGKI VYHGPRDDVL
0401: KFFEECGFQC PERKGVADFL QEVISKKDQG QYWLHQNLPH SFVSVDTLSK RFKDLEIGRK IEEALSKPYD ISKTHKDALS FNVYSLPKWE LFRACISREF
0501: LLMKRNYFVY LFKTFQLVLA AIITMTVFIR TRMDIDIIHG NSYMSCLFFA TVVLLVDGIP ELSMTVQRLS VFYKQKQLCF YPAWAYAIPA TVLKIPLSFF
0601: ESLVWTCLTY YVIGYTPEPY RFFRQFMILF AVHFTSISMF RCIAAIFQTG VAAMTAGSFV MLITFVFAGF AIPYTDMPGW LKWGFWVNPI SYAEIGLSVN
0701: EFLAPRWQKM QPTNVTLGRT ILESRGLNYD DYMYWVSLSA LLGLTIIFNT IFTLALSFLK SPTSSRPMIS QDKLSELQGT KDSSVKKNKP LDSSIKTNED
0801: PGKMILPFKP LTITFQDLNY YVDVPVEMKG QGYNEKKLQL LSEITGAFRP GVLTALMGIS GAGKTTLLDV LAGRKTSGYI EGEIRISGFL KVQETFARVS
0901: GYCEQTDIHS PSITVEESLI YSAWLRLVPE INPQTKIRFV KQVLETIELE EIKDALVGVA GVSGLSTEQR KRLTVAVELV ANPSIIFMDE PTTGLDARAA
1001: AIVMRAVKNV AETGRTIVCT IHQPSIHIFE AFDELVLLKR GGRMIYSGPL GQHSSCVIEY FQNIPGVAKI RDKYNPATWM LEVTSESVET ELDMDFAKIY
1101: NESDLYKNNS ELVKELSKPD HGSSDLHFKR TFAQNWWEQF KSCLWKMSLS YWRSPSYNLM RIGHTFISSF IFGLLFWNQG KKIDTQQNLF TVLGAIYGLV
1201: LFVGINNCTS ALQYFETERN VMYRERFAGM YSAFAYALAQ VVTEIPYIFI QSAEFVIVIY PMIGFYASFS KVFWSLYAMF CNLLCFNYLA MFLISITPNF
1301: MVAAILQSLF FTTFNIFAGF LIPKPQIPKW WVWFYYITPT SWTLNLFFSS QYGDIHQKIN AFGETKTVAS FLEDYFGFHH DRLMITAIIL IAFPIALATM
1401: YAFFVAKLNF QKR
Arabidopsis Description
PDR5pleiotropic drug resistance 5 [Source:TAIR;Acc:AT2G37280]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.