CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 2
plasma membrane 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043598_P003	Maize	cytosol, nucleus, plasma membrane	92.91	92.47
CDY69529	Canola	plasma membrane	33.02	68.49
OQU76555	Sorghum	mitochondrion, plasma membrane	59.62	68.29
CDY30162	Canola	plasma membrane	39.5	65.8
CDX67921	Canola	plasma membrane, plastid	61.58	65.61
AT3G16340.1	Thale cress	plasma membrane	61.51	64.34
CDX97743	Canola	plasma membrane	60.9	63.84
Bra021173.1-P	Field mustard	plasma membrane	60.84	63.77
Bra003527.1-P	Field mustard	plasma membrane, plastid	61.92	63.68
PGSC0003DMT400006729	Potato	plastid	64.42	63.6
Solyc03g120980.2.1	Tomato	plastid	64.08	63.27
CDY39621	Canola	plastid	61.17	63.09
CDY20193	Canola	plasma membrane, plastid	59.01	63.06
CDY70099	Canola	cytosol	18.3	63.02
KRH23404	Soybean	plasma membrane	63.2	62.95
CDY36534	Canola	plastid	60.9	62.86
Bra026156.1-P	Field mustard	plastid	61.11	62.67
Bra016669.1-P	Field mustard	plastid	60.5	62.35
AT1G59870.1	Thale cress	plasma membrane, plastid	61.78	62.29
CDX83991	Canola	plastid	60.63	61.17
CDY68747	Canola	plastid	33.09	57.31
CDY69102	Canola	plastid	32.88	57.16
EES03260	Sorghum	plasma membrane	48.82	56.48
EES04729	Sorghum	mitochondrion	54.83	56.31
KXG32863	Sorghum	cytosol, peroxisome, plasma membrane	54.56	55.69
EES03255	Sorghum	cytosol, peroxisome, plasma membrane, plastid	54.36	55.02
KXG32865	Sorghum	plasma membrane	54.09	54.94
EES08826	Sorghum	mitochondrion	53.14	54.84
EER98908	Sorghum	cytosol, nucleus, plasma membrane	54.09	54.83
KXG32860	Sorghum	plasma membrane	53.81	54.48
EES00201	Sorghum	plasma membrane	51.59	53.58
KXG20401	Sorghum	plasma membrane	52.19	53.31
KXG37059	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	50.44	53.21
OQU81756	Sorghum	plasma membrane	45.1	53.14
EER98758	Sorghum	cytosol, nucleus, plasma membrane	51.92	53.07
KXG36359	Sorghum	plastid	50.17	51.0
OQU80771	Sorghum	plasma membrane	38.96	49.15
OQU91497	Sorghum	cytosol, nucleus, plasma membrane	44.5	47.72
OQU89274	Sorghum	plasma membrane	31.26	47.24
Bra027171.1-P	Field mustard	plasma membrane	60.9	46.93

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:8069814	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_trans_N	InterPro:ABC_transporter-like	UniProt:C5XIF0	EnsemblPlants:EES01392	ProteinID:EES01392	ProteinID:EES01392.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF353	SMART:SM00382	EnsemblPlantsGene:SORBI_3003G281500	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0001A8484E	RefSeq:XP_002456272.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:61655478..61664524

Molecular Weight (calculated)

167014.0 Da

IEP (calculated)

8.386

GRAVY (calculated)

0.031

Length

1481 amino acids

Sequence
(BLAST)

0001: MEMLSRGLHG MASPDATPYF SGASSRRRSG ADEVDDEEAL QWAAMERLPS FERLRTGLMR AAADASSSDV SGGGPGVRMR RRRHAHEEVD VRAMGLAQRQ
0101: AFVDRVFRVA EEDNERFLKK LRARIDRAGI QIPTVEVRFR DLNVEAECHV GTRALPTLAN VSLDVAEGLL RRVGVKLGKR RTLHILKGVS GVVRPSRMTL
0201: LLGPPSSGKT TLLLALAGKL DPTLEASGEV TYNGYGLDEF VPQKTAAYIS QNDVHDGEMT VKEVLDFSSR CQGVGQRYEL LKELAKKERQ QGIYPDPEVD
0301: LFMKATSVHG ATLQTDYILR ILGLDMCADI LVGNELMRGI SGGQKKRLTT GEMLVGPTKV LFMDEISTGL DSSTTFQIIK CIQQIVHMGE ATVLASLLQP
0401: TPEVFELFDD VMLLSEGQIV YQGPREYVLE FFERCGFRCP QRKGVPDFLQ EVTSKKDQEQ YWIQNEKPYH YVSVPEFVAK FKKFHMGKSL RKQLSVPFHK
0501: RKIHKSALVF SEKSVSALEL LKASWSKEWL LMKRNSFVYV FKTVQGTFVA IVASTVFLRT QMHTSTEEDG QIYIGALLYA MIVNMFNGFA ESSIILARLP
0601: VVYKHRDFLF YRPWALVLPN VLLRVPASIF ESIIWVAITY YTIGFAPEAS RFFKHLALVF FIQQMAAGLF RLVSGLCRTV IITNSAGSLA VLFMFTLGGF
0701: ILPKDAISKW LIWGYYCSPI TYAYTAMASN EMHSPRWMDK FAPDGRRLGV AVLENSNIPT NKEWYWIAMG ALLGFTVLFN VLFTLSLMYL NPVGKPQAIL
0801: PEETDTSLED TEEGKMLDIT KRTKIPTPEP LSSNSMITLD KVLEQLRGQS PNTSDRSHMN ASTRIHPRRG MILPFEPLSM SFSEINYYVD MPAEMKSQGV
0901: TADKLQLLSG ISGAFRPGVL TALMGVSGSG KTTLMDVLSG RKTGGYIEGE IYISGYPKNQ ETFARISGYC EQNDIHSPQI TIRESLLFSA FLRLPKEVTN
1001: QEKKIFVDEV MELVELDGLK DAIVGLPGVN GLSTEQRKRL TVAVELVANP SIIFMDEPTS GLDARAAAVV MRTVRNTVNT GRTVVCTIHQ PSIDIFEAFD
1101: ELLLMKRGGQ IIYSGPLGRD SHKVVEYFEE VPGIPKIKEG CNPATWMLDV TSASTEVQLK IDFAEHYKSS TMYERNKALV KELSKPPPGS SDLYFPTQYS
1201: QSTFDQFKFC LWKQRLTYWR SPDYNLVRMV FALFTALMLG IIFWRVGSKM ESSADLLIIV GSMYFAVAFV GFNNCITAQP VIAVERTVFY RERAAGMYSA
1301: IPYAFSQVVV EIPYVFVESV IYTLIVYSMM SFQWTPAKFF WFFYTSFLSF LYFTYYGMMG VAITPNPQVA SIFAAAFYGL FNLFSGFIVP RSRIPVWWIW
1401: YYWICPVAWT VYGLLVSQYG DVEDFIKVPG KPDQQVKTFI KDYFGFDLEF MGVVAAVLAA FTTLFAFIYV YCIKRFNFQQ R

Best Arabidopsis Sequence Match ( AT1G59870.1 )
(BLAST)

0001: MDYNPNLPPL GGGGVSMRRS ISRSVSRASR NIEDIFSSGS RRTQSVNDDE EALKWAAIEK LPTYSRLRTT LMNAVVEDDV YGNQLMSKEV DVTKLDGEDR
0101: QKFIDMVFKV AEQDNERILT KLRNRIDRVG IKLPTVEVRY EHLTIKADCY TGNRSLPTLL NVVRNMGESA LGMIGIQFAK KAQLTILKDI SGVIKPGRMT
0201: LLLGPPSSGK TTLLLALAGK LDKSLQVSGD ITYNGYQLDE FVPRKTSAYI SQNDLHVGIM TVKETLDFSA RCQGVGTRYD LLNELARREK DAGIFPEADV
0301: DLFMKASAAQ GVKNSLVTDY TLKILGLDIC KDTIVGDDMM RGISGGQKKR VTTGEMIVGP TKTLFMDEIS TGLDSSTTFQ IVKCLQQIVH LNEATVLMSL
0401: LQPAPETFDL FDDIILVSEG QIVYQGPRDN ILEFFESFGF KCPERKGTAD FLQEVTSKKD QEQYWVNPNR PYHYIPVSEF ASRYKSFHVG TKMSNELAVP
0501: FDKSRGHKAA LVFDKYSVSK RELLKSCWDK EWLLMQRNAF FYVFKTVQIV IIAAITSTLF LRTEMNTRNE GDANLYIGAL LFGMIINMFN GFAEMAMMVS
0601: RLPVFYKQRD LLFYPSWTFS LPTFLLGIPS SILESTAWMV VTYYSIGFAP DASRFFKQFL LVFLIQQMAA SLFRLIASVC RTMMIANTGG ALTLLLVFLL
0701: GGFLLPKGKI PDWWGWAYWV SPLTYAFNGL VVNEMFAPRW MNKMASSNST IKLGTMVLNT WDVYHQKNWY WISVGALLCF TALFNILFTL ALTYLNPLGK
0801: KAGLLPEEEN EDADQGKDPM RRSLSTADGN RRGEVAMGRM SRDSAAEASG GAGNKKGMVL PFTPLAMSFD DVKYFVDMPG EMRDQGVTET RLQLLKGVTG
0901: AFRPGVLTAL MGVSGAGKTT LMDVLAGRKT GGYIEGDVRI SGFPKVQETF ARISGYCEQT DIHSPQVTVR ESLIFSAFLR LPKEVGKDEK MMFVDQVMEL
1001: VELDSLRDSI VGLPGVTGLS TEQRKRLTIA VELVANPSII FMDEPTSGLD ARAAAIVMRA VRNTVDTGRT VVCTIHQPSI DIFEAFDELM LMKRGGQVIY
1101: AGPLGQNSHK VVEYFESFPG VSKIPEKYNP ATWMLEASSL AAELKLSVDF AELYNQSALH QRNKALVKEL SVPPAGASDL YFATQFSQNT WGQFKSCLWK
1201: QWWTYWRSPD YNLVRFIFTL ATSLLIGTVF WQIGGNRSNA GDLTMVIGAL YAAIIFVGIN NCSTVQPMVA VERTVFYRER AAGMYSAMPY AISQVTCELP
1301: YVLIQTVYYS LIVYAMVGFE WKAEKFFWFV FVSYFSFLYW TYYGMMTVSL TPNQQVASIF ASAFYGIFNL FSGFFIPRPK IPKWWIWYYW ICPVAWTVYG
1401: LIVSQYGDVE TRIQVLGGAP DLTVKQYIED HYGFQSDFMG PVAAVLIAFT VFFAFIFAFC IRTLNFQTR

Arabidopsis Description

ABCG36ABC transporter G family member 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE2]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.