Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0022g01740.t01 | Wine grape | nucleus | 45.96 | 41.08 |
| VIT_02s0241g00050.t01 | Wine grape | nucleus | 46.26 | 40.7 |
Protein Annotations
| ArrayExpress:VIT_02s0025g02460 | EMBL:AM488984 | EMBL:FN596251 | EnsemblPlants:VIT_02s0025g02460.t01 | EnsemblPlantsGene:VIT_02s0025g02460 | EntrezGene:100261503 |
| EntrezGene:LOC100261503 | InterPro:RNaseH-like_sf | PANTHER:PTHR32166 | PANTHER:PTHR32166:SF50 | ProteinID:CAN62287 | ProteinID:CAN62287.1 |
| ProteinID:CBI34576 | ProteinID:CBI34576.3 | RefSeq:XP_002272902 | RefSeq:XP_002272902.1 | SEG:seg | SUPFAM:SSF53098 |
| UniParc:UPI00015CCB7A | UniProt:D7TVQ1 | wikigene:100261503 | wikigene:LOC100261503 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr2:-:2141900..2143945
Molecular Weight (calculated)
77879.3 Da
IEP (calculated)
8.299
GRAVY (calculated)
-0.328
Length
681 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATFPAQED DLFSRNLQKR YNGLVMVRKR AIRGKGAWYW YHLEPILFQN QDTGTAKAVK LRCGLCSALF SASNPSRTAT EHLRRGSCPN FRHPEVNYNG
101: IGPKSTKHNL LALPPPLAPL AMVPAFCSSE PVFPSQPDKP QLTQSQIDTA FDLLSEWFYE SCGHVSFSTL DHPKFKAFLN HLGLPCINRS YITGAKLDAK
201: YEEIMVQTKS KLQDAMFFQL STDGWGKGKK RNNSDFPDDF ASISLNLPNG STLFHKVLFL NTNSPSSDYI KDILWSTIIE TSGYDVFRCA GIVADVGNIN
301: NIVLQELETR HHWMVIITCQ STALHKLLRD FSKDLPLFTT TASICLKIIQ KFESHHYNGL NICLTRRPYS SLDQASAKIS AVENVARLFH KFGHSFTEKV
401: IPIDPSDRAL SDVVQESKFW KDLDCFANLI SIIRDLLQEI KEDRLCLGQC LPLWKELKSR ITGWCSRFEM DEKPVMELVN RRFAKNYHAA WAASYVLDPL
501: FLVEDSCGRY LPPFKFLTPE QEKDVVKTIT RLTRDEEAHI ALMELMKWRT EGLDPVYARA VQAKERDPIS GKMRVVNPRG NRLIWETYLS EFKVLRRVAA
601: RLVFLQATAT KLNWNQSFLS LVSSKRQSNE TIERAQKVLF VSLHQRFERD DFSDEEEKDS ELSSCENGMS LDQCLVRRPV D
101: IGPKSTKHNL LALPPPLAPL AMVPAFCSSE PVFPSQPDKP QLTQSQIDTA FDLLSEWFYE SCGHVSFSTL DHPKFKAFLN HLGLPCINRS YITGAKLDAK
201: YEEIMVQTKS KLQDAMFFQL STDGWGKGKK RNNSDFPDDF ASISLNLPNG STLFHKVLFL NTNSPSSDYI KDILWSTIIE TSGYDVFRCA GIVADVGNIN
301: NIVLQELETR HHWMVIITCQ STALHKLLRD FSKDLPLFTT TASICLKIIQ KFESHHYNGL NICLTRRPYS SLDQASAKIS AVENVARLFH KFGHSFTEKV
401: IPIDPSDRAL SDVVQESKFW KDLDCFANLI SIIRDLLQEI KEDRLCLGQC LPLWKELKSR ITGWCSRFEM DEKPVMELVN RRFAKNYHAA WAASYVLDPL
501: FLVEDSCGRY LPPFKFLTPE QEKDVVKTIT RLTRDEEAHI ALMELMKWRT EGLDPVYARA VQAKERDPIS GKMRVVNPRG NRLIWETYLS EFKVLRRVAA
601: RLVFLQATAT KLNWNQSFLS LVSSKRQSNE TIERAQKVLF VSLHQRFERD DFSDEEEKDS ELSSCENGMS LDQCLVRRPV D
001: MATTTNATTT ATQQQTQTQS PTQQPSAEEL ATKALQKRYE GLMMVRTKAV KGKGAWYWSH LEPILLHNTD TGFPKAVKLR CSLCDAVFSA SNPSRTASEH
101: LKRGTCPNFN SLPKPISTIS PSPPPPPSSS HRKRNSSAVE ALNHHHHHPH HHHQGSYNVT PLSVVDPSRF CGQFPVTQQP HLMLSGGKDD LGPLAMLEDS
201: VKKLKSPKTS QTRNLTKAQI DSALDSLSDW VFESCGSVSL SGLEHPKLRA FLTQVGLPII SRRDFVTGRL DLKYEDSRAE AESRIHDAMF FQIASDGWKF
301: DSSGENLVNL IVNLPNGTSL YRRAVFVNGA VPSNYAEEVL WETVRGICGN SPQRCVGIVS DRFMSKALRN LESQHQWMVN LSCQFQGFNS LIRDFVKELP
401: LFKSVSQSCS RLVNFVNSTA QIRNAVCKYQ LQEQGETRML HLPLDSSLFE PLYNLLEDVL SFARAIQLVM HDDVCKAVLM EDHMAREVGE MVGDVGFWNE
501: VEAVYLLLKL VKEMARRIEE ERPLVGQCLP LWDELRSKIK DWYAKFNVVE ERQVEKIVER RFKKSYHPAW AAAFILDPLY LIKDSSGKYL PPFKCLSPEQ
601: EKDVDKLITR LVSRDEAHIA MMELMKWRTE GLDPVYARAV QMKERDPVSG KMRIANPQSS RLVWETYLSE FRSLGRVAVR LIFLHATSCG FKCNSSVLRW
701: VNSNGRSRAA VDRAQKLIFI SANSKFERRD FSNEEERDAE LLAMANGEDD VLNDVLIDTS SV
101: LKRGTCPNFN SLPKPISTIS PSPPPPPSSS HRKRNSSAVE ALNHHHHHPH HHHQGSYNVT PLSVVDPSRF CGQFPVTQQP HLMLSGGKDD LGPLAMLEDS
201: VKKLKSPKTS QTRNLTKAQI DSALDSLSDW VFESCGSVSL SGLEHPKLRA FLTQVGLPII SRRDFVTGRL DLKYEDSRAE AESRIHDAMF FQIASDGWKF
301: DSSGENLVNL IVNLPNGTSL YRRAVFVNGA VPSNYAEEVL WETVRGICGN SPQRCVGIVS DRFMSKALRN LESQHQWMVN LSCQFQGFNS LIRDFVKELP
401: LFKSVSQSCS RLVNFVNSTA QIRNAVCKYQ LQEQGETRML HLPLDSSLFE PLYNLLEDVL SFARAIQLVM HDDVCKAVLM EDHMAREVGE MVGDVGFWNE
501: VEAVYLLLKL VKEMARRIEE ERPLVGQCLP LWDELRSKIK DWYAKFNVVE ERQVEKIVER RFKKSYHPAW AAAFILDPLY LIKDSSGKYL PPFKCLSPEQ
601: EKDVDKLITR LVSRDEAHIA MMELMKWRTE GLDPVYARAV QMKERDPVSG KMRIANPQSS RLVWETYLSE FRSLGRVAVR LIFLHATSCG FKCNSSVLRW
701: VNSNGRSRAA VDRAQKLIFI SANSKFERRD FSNEEERDAE LLAMANGEDD VLNDVLIDTS SV
Arabidopsis Description
F16P17.2 protein [Source:UniProtKB/TrEMBL;Acc:Q9LQ19]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.