Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0241g00050.t01 | Wine grape | nucleus | 73.23 | 72.09 |
| PGSC0003DMT400079650 | Potato | cytosol, nucleus, plastid | 69.82 | 70.46 |
| Solyc03g007180.1.1 | Tomato | nucleus | 69.16 | 69.8 |
| KRH38730 | Soybean | cytosol | 68.77 | 68.68 |
| KRG92459 | Soybean | cytosol, nucleus | 60.89 | 66.86 |
| KRH34341 | Soybean | cytosol, nucleus | 62.07 | 66.25 |
| KRH09233 | Soybean | nucleus | 63.78 | 65.23 |
| GSMUA_Achr2P12300_001 | Banana | nucleus | 58.14 | 64.11 |
| GSMUA_Achr2P03190_001 | Banana | nucleus | 45.28 | 63.54 |
| GSMUA_Achr9P20710_001 | Banana | cytosol | 51.71 | 58.46 |
| GSMUA_Achr7P16500_001 | Banana | plastid | 42.78 | 56.7 |
| Os02t0450000-01 | Rice | extracellular | 57.87 | 54.44 |
| Os04t0261400-01 | Rice | cytosol | 53.94 | 53.38 |
| Zm00001d015889_P001 | Maize | nucleus | 55.51 | 53.34 |
| Zm00001d004164_P001 | Maize | cytosol | 51.71 | 50.9 |
| Zm00001d053254_P001 | Maize | nucleus | 52.89 | 50.31 |
| Zm00001d025091_P001 | Maize | nucleus | 50.66 | 49.87 |
| TraesCS2A01G059900.1 | Wheat | cytosol | 52.49 | 49.75 |
| TraesCS2B01G073600.1 | Wheat | cytosol | 52.49 | 49.75 |
| TraesCSU01G024900.1 | Wheat | nucleus | 52.36 | 49.38 |
| VIT_02s0025g02460.t01 | Wine grape | cytosol | 41.08 | 45.96 |
Protein Annotations
| EntrezGene:100266895 | wikigene:100266895 | MapMan:35.2 | EMBL:AM484567 | ProteinID:CAN75358 | ProteinID:CAN75358.1 |
| ProteinID:CCB49267 | ProteinID:CCB49267.1 | UniProt:F6HAL0 | EMBL:FN595506 | EntrezGene:LOC100266895 | wikigene:LOC100266895 |
| PANTHER:PTHR32166 | PANTHER:PTHR32166:SF50 | InterPro:RNaseH-like_sf | SUPFAM:SSF53098 | UniParc:UPI00015CB9EC | ArrayExpress:VIT_16s0022g01740 |
| EnsemblPlantsGene:VIT_16s0022g01740 | EnsemblPlants:VIT_16s0022g01740.t01 | unigene:Vvi.5736 | RefSeq:XP_002268183 | RefSeq:XP_002268183.1 | RefSeq:XP_019081802.1 |
Description
No Description!
Coordinates
chr16:-:13850981..13853563
Molecular Weight (calculated)
85347.7 Da
IEP (calculated)
7.790
GRAVY (calculated)
-0.239
Length
762 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPNSTPID SSSGDEAAAK AMHKRYEGLV TVRTKAIKGK GAWYWAHLEP ILVPNPDTGL PKAVKLKCSL CEAVFSASNP SRTASEHLKR GTCPNFSSAL
101: RPISTVSPSL ALPPSHNHRK RSAHMGAPSS SYHVSSLAMV DSPRFCGELG YSSPPPVQNP VGSGGEKVLS HHQLVLSGGK EDLGALAMLE DSVKRLKSPK
201: ASPGPELSKE QINSALELLA DWFYESCGSV SFSSLEHPKF QAFLNQVGLP SVSRREFSGA RLDTKFDEAK IESEARIRDA MFFQVASDGW NSKNFGFSSG
301: EENLVKFTVN LPNGTSVFQK AVFTGGSVPS KHAEEILWET ITGICGSVVQ RCVGIVADKY KAKALRNLEI QNHWMVNLSC QLQGFISLIK DFSKELPLFS
401: IVTEKCLKLA NFINIKSQVR HSFHKFQLQE LDHVGLLRVP PSKCDNMKNF VHVYAMLEDI MSNAQVLQLV VMDESYKVIC VEDPAAREVA DMIQDVRFWN
501: ELDAVHSLVK LIREMAQEIE VERPLVGQCL PLWEELRTKV REWCVKFNID EEPVEKIVEK RFRKNYHPAW SAAFILDPFY LMRDTSGKYL PPFKCLTHEQ
601: EKDVDKLITR LVTREEAHIA LMELMKWRSE GLDPLYAQAV QVKQQDPVTG KMKIANPQSS RLVWETCLKD FKSLGKVAVR LIFLHATACG FKCNWSFMRW
701: VCVHGHSRVG LDRAQKMIFI AAHAKLERRD FSSEEEKDAE LFAMANGESD MLNEVFADAP SV
101: RPISTVSPSL ALPPSHNHRK RSAHMGAPSS SYHVSSLAMV DSPRFCGELG YSSPPPVQNP VGSGGEKVLS HHQLVLSGGK EDLGALAMLE DSVKRLKSPK
201: ASPGPELSKE QINSALELLA DWFYESCGSV SFSSLEHPKF QAFLNQVGLP SVSRREFSGA RLDTKFDEAK IESEARIRDA MFFQVASDGW NSKNFGFSSG
301: EENLVKFTVN LPNGTSVFQK AVFTGGSVPS KHAEEILWET ITGICGSVVQ RCVGIVADKY KAKALRNLEI QNHWMVNLSC QLQGFISLIK DFSKELPLFS
401: IVTEKCLKLA NFINIKSQVR HSFHKFQLQE LDHVGLLRVP PSKCDNMKNF VHVYAMLEDI MSNAQVLQLV VMDESYKVIC VEDPAAREVA DMIQDVRFWN
501: ELDAVHSLVK LIREMAQEIE VERPLVGQCL PLWEELRTKV REWCVKFNID EEPVEKIVEK RFRKNYHPAW SAAFILDPFY LMRDTSGKYL PPFKCLTHEQ
601: EKDVDKLITR LVTREEAHIA LMELMKWRSE GLDPLYAQAV QVKQQDPVTG KMKIANPQSS RLVWETCLKD FKSLGKVAVR LIFLHATACG FKCNWSFMRW
701: VCVHGHSRVG LDRAQKMIFI AAHAKLERRD FSSEEEKDAE LFAMANGESD MLNEVFADAP SV
001: MATTTNATTT ATQQQTQTQS PTQQPSAEEL ATKALQKRYE GLMMVRTKAV KGKGAWYWSH LEPILLHNTD TGFPKAVKLR CSLCDAVFSA SNPSRTASEH
101: LKRGTCPNFN SLPKPISTIS PSPPPPPSSS HRKRNSSAVE ALNHHHHHPH HHHQGSYNVT PLSVVDPSRF CGQFPVTQQP HLMLSGGKDD LGPLAMLEDS
201: VKKLKSPKTS QTRNLTKAQI DSALDSLSDW VFESCGSVSL SGLEHPKLRA FLTQVGLPII SRRDFVTGRL DLKYEDSRAE AESRIHDAMF FQIASDGWKF
301: DSSGENLVNL IVNLPNGTSL YRRAVFVNGA VPSNYAEEVL WETVRGICGN SPQRCVGIVS DRFMSKALRN LESQHQWMVN LSCQFQGFNS LIRDFVKELP
401: LFKSVSQSCS RLVNFVNSTA QIRNAVCKYQ LQEQGETRML HLPLDSSLFE PLYNLLEDVL SFARAIQLVM HDDVCKAVLM EDHMAREVGE MVGDVGFWNE
501: VEAVYLLLKL VKEMARRIEE ERPLVGQCLP LWDELRSKIK DWYAKFNVVE ERQVEKIVER RFKKSYHPAW AAAFILDPLY LIKDSSGKYL PPFKCLSPEQ
601: EKDVDKLITR LVSRDEAHIA MMELMKWRTE GLDPVYARAV QMKERDPVSG KMRIANPQSS RLVWETYLSE FRSLGRVAVR LIFLHATSCG FKCNSSVLRW
701: VNSNGRSRAA VDRAQKLIFI SANSKFERRD FSNEEERDAE LLAMANGEDD VLNDVLIDTS SV
101: LKRGTCPNFN SLPKPISTIS PSPPPPPSSS HRKRNSSAVE ALNHHHHHPH HHHQGSYNVT PLSVVDPSRF CGQFPVTQQP HLMLSGGKDD LGPLAMLEDS
201: VKKLKSPKTS QTRNLTKAQI DSALDSLSDW VFESCGSVSL SGLEHPKLRA FLTQVGLPII SRRDFVTGRL DLKYEDSRAE AESRIHDAMF FQIASDGWKF
301: DSSGENLVNL IVNLPNGTSL YRRAVFVNGA VPSNYAEEVL WETVRGICGN SPQRCVGIVS DRFMSKALRN LESQHQWMVN LSCQFQGFNS LIRDFVKELP
401: LFKSVSQSCS RLVNFVNSTA QIRNAVCKYQ LQEQGETRML HLPLDSSLFE PLYNLLEDVL SFARAIQLVM HDDVCKAVLM EDHMAREVGE MVGDVGFWNE
501: VEAVYLLLKL VKEMARRIEE ERPLVGQCLP LWDELRSKIK DWYAKFNVVE ERQVEKIVER RFKKSYHPAW AAAFILDPLY LIKDSSGKYL PPFKCLSPEQ
601: EKDVDKLITR LVSRDEAHIA MMELMKWRTE GLDPVYARAV QMKERDPVSG KMRIANPQSS RLVWETYLSE FRSLGRVAVR LIFLHATSCG FKCNSSVLRW
701: VNSNGRSRAA VDRAQKLIFI SANSKFERRD FSNEEERDAE LLAMANGEDD VLNDVLIDTS SV
Arabidopsis Description
F16P17.2 protein [Source:UniProtKB/TrEMBL;Acc:Q9LQ19]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.