Factsheet for GSMUA_Achr7P16500_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P12300_001	Banana	nucleus	64.17	53.4
GSMUA_Achr2P03190_001	Banana	nucleus	50.09	53.04
CDY68721	Canola	nucleus	22.26	46.21
CDY46928	Canola	cytosol	21.74	45.96
Bra027012.1-P	Field mustard	nucleus	21.39	45.72
KRG96010	Soybean	cytosol	6.43	45.68
VIT_02s0241g00050.t01	Wine grape	nucleus	58.43	43.41
KRH28018	Soybean	nucleus	54.43	42.82
VIT_16s0022g01740.t01	Wine grape	nucleus	56.7	42.78
KRH57308	Soybean	nucleus	56.0	42.65
KRH77421	Soybean	cytosol	55.48	42.53
KRH04039	Soybean	nucleus	55.65	42.27
Bra026973.1-P	Field mustard	nucleus	54.43	41.9
CDY26560	Canola	nucleus	54.43	41.9
AT1G62870.1	Thale cress	cytosol	55.48	41.86
CDX98069	Canola	nucleus	53.74	41.48
CDY21048	Canola	nucleus	54.09	41.41
Bra016775.1-P	Field mustard	nucleus	53.91	41.28
CDY31263	Canola	nucleus	54.09	41.25
CDY15994	Canola	nucleus	54.09	41.14
GSMUA_Achr9P20710_001	Banana	cytosol	48.0	40.95
PGSC0003DMT400079650	Potato	cytosol, nucleus, plastid	53.74	40.93
KRH38730	Soybean	cytosol	54.26	40.89
KRH09233	Soybean	nucleus	52.87	40.81
CDY30075	Canola	nucleus	53.91	40.68
Solyc03g007180.1.1	Tomato	nucleus	53.39	40.66
Solyc08g079550.1.1	Tomato	nucleus	57.74	40.44
Bra019761.1-P	Field mustard	nucleus	53.22	40.42
AT1G12380.1	Thale cress	cytosol, nucleus, plastid	55.65	40.35
KRG92459	Soybean	cytosol, nucleus	48.7	40.35
PGSC0003DMT400010029	Potato	nucleus	57.57	40.12
KRH34341	Soybean	cytosol, nucleus	49.74	40.06

Protein Annotations

EnsemblPlants:GSMUA_Achr7P16500_001	EnsemblPlants:GSMUA_Achr7T16500_001	EnsemblPlantsGene:GSMUA_Achr7G16500_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR32166	PANTHER:PTHR32166:SF50	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002960FB7	UniProt:M0TI37
MapMan:35.2	:	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G16500_001]

Coordinates

chr7:-:14370953..14373538

Molecular Weight (calculated)

63676.4 Da

IEP (calculated)

7.756

GRAVY (calculated)

-0.133

Length

575 amino acids

Sequence
(BLAST)

001: MATANALTTT SASTTTIEAQ AGGAGAEDVA AKAVNKRYDA LMTVRSKAIK GKGAWYWAHL EPVLVQSSDT GLPKAVKLRC SLCDTVFSAS NPSRTASEHL
101: KRGTCPNFSS SLSAAAPPSS VPNSRKRSSS SVAVVSPSPA PFHALHLAIV DPSRFSSVKK LKSPKASHGV ALSKSQVDSA ISLLTDWFHD SAGVGAVSLF
201: SIEHPKFRAF LGQVGLPPIS PRDLVGHRLD ARYEEARADA DARIHDALFF QLASDGWKPL NSDGDSIMNV TVNLPNGTTV YRRSSVILHE SYKLICLTDP
301: TARELADVIG DMDFWNKLGA AHSLVKLIQD MVGEMETERP LVGQCLPLWE ELRSKVKGWC GRYCVEEGPV EKVMEKRFKK NYHPAWSAAF ILDPLYLMKD
401: VSGKYLPPFK CLTPDQEKDV DKLITRLVSR EEAHIALMEL MKWRAEGLDP LYAQAVQVKL QDPVTGKYRI ANPQSSRLVW ETCLSELNME RVRKLVFVAA
501: NAKLERADFS NQEDKDITLL LLDEEEDDVP NEHNVDWICR IFLIFFPIYF VTLIVLLSRI VWYSVVGGKW ALGIY

Best Arabidopsis Sequence Match ( AT1G62870.1 )
(BLAST)

001: MATTTNATTT ATQQQTQTQS PTQQPSAEEL ATKALQKRYE GLMMVRTKAV KGKGAWYWSH LEPILLHNTD TGFPKAVKLR CSLCDAVFSA SNPSRTASEH
101: LKRGTCPNFN SLPKPISTIS PSPPPPPSSS HRKRNSSAVE ALNHHHHHPH HHHQGSYNVT PLSVVDPSRF CGQFPVTQQP HLMLSGGKDD LGPLAMLEDS
201: VKKLKSPKTS QTRNLTKAQI DSALDSLSDW VFESCGSVSL SGLEHPKLRA FLTQVGLPII SRRDFVTGRL DLKYEDSRAE AESRIHDAMF FQIASDGWKF
301: DSSGENLVNL IVNLPNGTSL YRRAVFVNGA VPSNYAEEVL WETVRGICGN SPQRCVGIVS DRFMSKALRN LESQHQWMVN LSCQFQGFNS LIRDFVKELP
401: LFKSVSQSCS RLVNFVNSTA QIRNAVCKYQ LQEQGETRML HLPLDSSLFE PLYNLLEDVL SFARAIQLVM HDDVCKAVLM EDHMAREVGE MVGDVGFWNE
501: VEAVYLLLKL VKEMARRIEE ERPLVGQCLP LWDELRSKIK DWYAKFNVVE ERQVEKIVER RFKKSYHPAW AAAFILDPLY LIKDSSGKYL PPFKCLSPEQ
601: EKDVDKLITR LVSRDEAHIA MMELMKWRTE GLDPVYARAV QMKERDPVSG KMRIANPQSS RLVWETYLSE FRSLGRVAVR LIFLHATSCG FKCNSSVLRW
701: VNSNGRSRAA VDRAQKLIFI SANSKFERRD FSNEEERDAE LLAMANGEDD VLNDVLIDTS SV

Arabidopsis Description

F16P17.2 protein [Source:UniProtKB/TrEMBL;Acc:Q9LQ19]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.