CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28018	Soybean	nucleus	86.93	89.19
KRH57308	Soybean	nucleus	73.47	72.98
KRH04039	Soybean	nucleus	73.6	72.92
VIT_02s0241g00050.t01	Wine grape	nucleus	71.47	69.25
AT1G62870.1	Thale cress	cytosol	66.0	64.96
CDY26560	Canola	nucleus	64.4	64.66
Bra026973.1-P	Field mustard	nucleus	64.4	64.66
CDY21048	Canola	nucleus	63.87	63.78
Bra016775.1-P	Field mustard	nucleus	63.73	63.65
CDX98069	Canola	nucleus	63.2	63.62
CDY31263	Canola	nucleus	63.6	63.26
PGSC0003DMT400010029	Potato	nucleus	69.47	63.15
Solyc08g079550.1.1	Tomato	nucleus	69.07	63.09
CDY15994	Canola	nucleus	63.47	62.96
CDY30075	Canola	nucleus	63.73	62.73
Bra019761.1-P	Field mustard	nucleus	63.2	62.62
AT1G12380.1	Thale cress	cytosol, nucleus, plastid	65.47	61.92
GSMUA_Achr2P12300_001	Banana	nucleus	55.73	60.49
KRH34341	Soybean	cytosol, nucleus	56.93	59.8
KRG92459	Soybean	cytosol, nucleus	55.07	59.51
GSMUA_Achr2P03190_001	Banana	nucleus	43.07	59.48
CDY46928	Canola	cytosol	21.2	58.46
Bra027012.1-P	Field mustard	nucleus	20.93	58.36
KRH38730	Soybean	cytosol	59.2	58.19
KRG96010	Soybean	cytosol	6.27	58.02
GSMUA_Achr9P20710_001	Banana	cytosol	51.33	57.12
KRH09233	Soybean	nucleus	56.27	56.64
CDY68721	Canola	nucleus	20.8	56.32
GSMUA_Achr7P16500_001	Banana	plastid	42.53	55.48
Os02t0450000-01	Rice	extracellular	56.0	51.85
Zm00001d015889_P001	Maize	nucleus	53.73	50.82
Os04t0261400-01	Rice	cytosol	51.2	49.87
Zm00001d053254_P001	Maize	nucleus	53.2	49.81
Zm00001d004164_P001	Maize	cytosol	50.93	49.35
Zm00001d025091_P001	Maize	nucleus	49.6	48.06
TraesCS2A01G059900.1	Wheat	cytosol	50.27	46.89
TraesCS2B01G073600.1	Wheat	cytosol	50.27	46.89
TraesCSU01G024900.1	Wheat	nucleus	50.27	46.66

Protein Annotations

EMBL:ACUP02000672	EnsemblPlants:KRH77421	EnsemblPlantsGene:GLYMA_01G212400	EntrezGene:100802491	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:RNaseH-like_sf	PANTHER:PTHR32166	PANTHER:PTHR32166:SF50	ProteinID:KRH77421	ProteinID:KRH77421.1
SEG:seg	SUPFAM:SSF53098	UniParc:UPI0002337AEF	UniProt:I1J9Z3	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr1:-:54388377..54391665

Molecular Weight (calculated)

84324.8 Da

IEP (calculated)

8.409

GRAVY (calculated)

-0.320

Length

750 amino acids

Sequence
(BLAST)

001: MASTTPSADS ASADEVTAKA VHKRYQGLLT VRTKAIKGKG AWYWPHLEPM LLHNTETGLP KAVKLRCSLC DAVFSASNPS RTASEHLKRG TCPNFNSAAK
101: PVSSVSPSPA AAMAVSPPSS PTNHNHHHRK RNSASSYDAP PPPVVDPSRF FGELTYAPPR QQPHLVLSGG KDDLGALAML EDSVKKLKSP KTSPGPTLTK
201: TQIDSAFDYL ADWVYESCGS VSFSALEHPK FRAFLNQVGL PTVSIRELTG SRLEAKFEEA KADSESRIRD ALFFQVASVG WKRKVKKYCE EKLVNMSVNL
301: PNGTSLHRRT VLVTGSAPSN YAEEVLWETV TGICGNVVQQ CVGIVADKFK NKALRNLENR NPWMVNLFCQ YQGFNSLITD FNKELSIFST VTQNCVKLVS
401: FINFKSKVRS SFDKCQQLEY GHARLLRMPL PSLEFESFDT VYAMMEDVLS SFRALQLVLL DENFKMATIE DLNAREVGDM IRDVGFWNDL EAVHSLVKLV
501: EEMVQEIETE RPLVGQCLPL WGELRARVKD WCSKFHVAEG AVEKVIEKRF KKNYHPAWAA AYILDPLYLV RDTSGKYLPP FNYLTLEQEK DVDKLITRLV
601: SRDEAHIVLM ELMKWRTQGL DPVYARAVQM KERDPVTGKI RIVNPQSSRL VWETYLTEFK SLGRVAVRLI FLHATSRGFK CNWSSWRWEC SQGNSRAALD
701: RAHKLIFIAA HSKLERKDFS GDEEKDAELL SLANGEDDVL NEVFVETSTA

Best Arabidopsis Sequence Match ( AT1G62870.1 )
(BLAST)

001: MATTTNATTT ATQQQTQTQS PTQQPSAEEL ATKALQKRYE GLMMVRTKAV KGKGAWYWSH LEPILLHNTD TGFPKAVKLR CSLCDAVFSA SNPSRTASEH
101: LKRGTCPNFN SLPKPISTIS PSPPPPPSSS HRKRNSSAVE ALNHHHHHPH HHHQGSYNVT PLSVVDPSRF CGQFPVTQQP HLMLSGGKDD LGPLAMLEDS
201: VKKLKSPKTS QTRNLTKAQI DSALDSLSDW VFESCGSVSL SGLEHPKLRA FLTQVGLPII SRRDFVTGRL DLKYEDSRAE AESRIHDAMF FQIASDGWKF
301: DSSGENLVNL IVNLPNGTSL YRRAVFVNGA VPSNYAEEVL WETVRGICGN SPQRCVGIVS DRFMSKALRN LESQHQWMVN LSCQFQGFNS LIRDFVKELP
401: LFKSVSQSCS RLVNFVNSTA QIRNAVCKYQ LQEQGETRML HLPLDSSLFE PLYNLLEDVL SFARAIQLVM HDDVCKAVLM EDHMAREVGE MVGDVGFWNE
501: VEAVYLLLKL VKEMARRIEE ERPLVGQCLP LWDELRSKIK DWYAKFNVVE ERQVEKIVER RFKKSYHPAW AAAFILDPLY LIKDSSGKYL PPFKCLSPEQ
601: EKDVDKLITR LVSRDEAHIA MMELMKWRTE GLDPVYARAV QMKERDPVSG KMRIANPQSS RLVWETYLSE FRSLGRVAVR LIFLHATSCG FKCNSSVLRW
701: VNSNGRSRAA VDRAQKLIFI SANSKFERRD FSNEEERDAE LLAMANGEDD VLNDVLIDTS SV

Arabidopsis Description

F16P17.2 protein [Source:UniProtKB/TrEMBL;Acc:Q9LQ19]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.