Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46928 | Canola | cytosol | 95.91 | 94.85 |
| CDY68721 | Canola | nucleus | 90.33 | 87.73 |
| AT1G62870.1 | Thale cress | cytosol | 73.23 | 25.85 |
| Bra016775.1-P | Field mustard | nucleus | 65.43 | 23.44 |
| Bra026973.1-P | Field mustard | nucleus | 65.06 | 23.43 |
| Bra019761.1-P | Field mustard | nucleus | 64.31 | 22.85 |
| GSMUA_Achr7P16500_001 | Banana | plastid | 45.72 | 21.39 |
| KRH77421 | Soybean | cytosol | 58.36 | 20.93 |
| VIT_02s0241g00050.t01 | Wine grape | nucleus | 59.85 | 20.8 |
| GSMUA_Achr2P03190_001 | Banana | nucleus | 41.26 | 20.44 |
| KRH28018 | Soybean | nucleus | 55.39 | 20.38 |
| KRH57308 | Soybean | nucleus | 56.51 | 20.13 |
| KRH04039 | Soybean | nucleus | 55.76 | 19.82 |
| Solyc08g079550.1.1 | Tomato | nucleus | 59.48 | 19.49 |
| PGSC0003DMT400010029 | Potato | nucleus | 59.11 | 19.27 |
| Os02t0450000-01 | Rice | extracellular | 53.53 | 17.78 |
| Zm00001d015889_P001 | Maize | nucleus | 51.3 | 17.4 |
| Zm00001d053254_P001 | Maize | nucleus | 51.67 | 17.35 |
| GSMUA_Achr2P12300_001 | Banana | nucleus | 43.87 | 17.08 |
| Zm00001d025091_P001 | Maize | nucleus | 48.7 | 16.93 |
| TraesCS2A01G059900.1 | Wheat | cytosol | 48.33 | 16.17 |
| Os04t0261400-01 | Rice | cytosol | 46.1 | 16.1 |
| Zm00001d004164_P001 | Maize | cytosol | 46.1 | 16.02 |
| TraesCSU01G024900.1 | Wheat | nucleus | 47.58 | 15.84 |
| TraesCS2B01G073600.1 | Wheat | cytosol | 46.84 | 15.67 |
| GSMUA_Achr9P20710_001 | Banana | cytosol | 36.06 | 14.39 |
Protein Annotations
Description
AT1G12380 (E=2e-089) | unknown protein
Coordinates
chrA09:+:7582044..7584538
Molecular Weight (calculated)
29160.9 Da
IEP (calculated)
10.056
GRAVY (calculated)
-0.453
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTTAQSQSP QPSSEEIASK ALQKRYEGLM TVRTKATKGK GAWYWTHLEP ILLHNTDTNL PKAVKLRCSL CDAVFSASNP SRTASEHLKR GTCPNFNSLP
101: KPISTISPPP PPPPPPPSSR KRNSSGGSSV EAPSPLNHLP PGSYHVTPLT VVDPGRYCGR ELHFPAAQPH LMLSGGKDDL GPLAMLENSV KKLKSPTQTH
201: KLSRVQIDSA LASLSDWVFE SCGSVSLSGL EHPKLRAFLT QVGLPIVSRR DNDLEIGFGI HKYKSHITI
101: KPISTISPPP PPPPPPPSSR KRNSSGGSSV EAPSPLNHLP PGSYHVTPLT VVDPGRYCGR ELHFPAAQPH LMLSGGKDDL GPLAMLENSV KKLKSPTQTH
201: KLSRVQIDSA LASLSDWVFE SCGSVSLSGL EHPKLRAFLT QVGLPIVSRR DNDLEIGFGI HKYKSHITI
001: MATTTNATTT ATQQQTQTQS PTQQPSAEEL ATKALQKRYE GLMMVRTKAV KGKGAWYWSH LEPILLHNTD TGFPKAVKLR CSLCDAVFSA SNPSRTASEH
101: LKRGTCPNFN SLPKPISTIS PSPPPPPSSS HRKRNSSAVE ALNHHHHHPH HHHQGSYNVT PLSVVDPSRF CGQFPVTQQP HLMLSGGKDD LGPLAMLEDS
201: VKKLKSPKTS QTRNLTKAQI DSALDSLSDW VFESCGSVSL SGLEHPKLRA FLTQVGLPII SRRDFVTGRL DLKYEDSRAE AESRIHDAMF FQIASDGWKF
301: DSSGENLVNL IVNLPNGTSL YRRAVFVNGA VPSNYAEEVL WETVRGICGN SPQRCVGIVS DRFMSKALRN LESQHQWMVN LSCQFQGFNS LIRDFVKELP
401: LFKSVSQSCS RLVNFVNSTA QIRNAVCKYQ LQEQGETRML HLPLDSSLFE PLYNLLEDVL SFARAIQLVM HDDVCKAVLM EDHMAREVGE MVGDVGFWNE
501: VEAVYLLLKL VKEMARRIEE ERPLVGQCLP LWDELRSKIK DWYAKFNVVE ERQVEKIVER RFKKSYHPAW AAAFILDPLY LIKDSSGKYL PPFKCLSPEQ
601: EKDVDKLITR LVSRDEAHIA MMELMKWRTE GLDPVYARAV QMKERDPVSG KMRIANPQSS RLVWETYLSE FRSLGRVAVR LIFLHATSCG FKCNSSVLRW
701: VNSNGRSRAA VDRAQKLIFI SANSKFERRD FSNEEERDAE LLAMANGEDD VLNDVLIDTS SV
101: LKRGTCPNFN SLPKPISTIS PSPPPPPSSS HRKRNSSAVE ALNHHHHHPH HHHQGSYNVT PLSVVDPSRF CGQFPVTQQP HLMLSGGKDD LGPLAMLEDS
201: VKKLKSPKTS QTRNLTKAQI DSALDSLSDW VFESCGSVSL SGLEHPKLRA FLTQVGLPII SRRDFVTGRL DLKYEDSRAE AESRIHDAMF FQIASDGWKF
301: DSSGENLVNL IVNLPNGTSL YRRAVFVNGA VPSNYAEEVL WETVRGICGN SPQRCVGIVS DRFMSKALRN LESQHQWMVN LSCQFQGFNS LIRDFVKELP
401: LFKSVSQSCS RLVNFVNSTA QIRNAVCKYQ LQEQGETRML HLPLDSSLFE PLYNLLEDVL SFARAIQLVM HDDVCKAVLM EDHMAREVGE MVGDVGFWNE
501: VEAVYLLLKL VKEMARRIEE ERPLVGQCLP LWDELRSKIK DWYAKFNVVE ERQVEKIVER RFKKSYHPAW AAAFILDPLY LIKDSSGKYL PPFKCLSPEQ
601: EKDVDKLITR LVSRDEAHIA MMELMKWRTE GLDPVYARAV QMKERDPVSG KMRIANPQSS RLVWETYLSE FRSLGRVAVR LIFLHATSCG FKCNSSVLRW
701: VNSNGRSRAA VDRAQKLIFI SANSKFERRD FSNEEERDAE LLAMANGEDD VLNDVLIDTS SV
Arabidopsis Description
F16P17.2 protein [Source:UniProtKB/TrEMBL;Acc:Q9LQ19]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.