Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P16500_001 | Banana | plastid | 53.4 | 64.17 |
| GSMUA_Achr2P03190_001 | Banana | nucleus | 46.02 | 58.56 |
| VIT_16s0022g01740.t01 | Wine grape | nucleus | 64.11 | 58.14 |
| KRH57308 | Soybean | nucleus | 62.37 | 57.09 |
| KRH04039 | Soybean | nucleus | 62.52 | 57.07 |
| KRH28018 | Soybean | nucleus | 60.06 | 56.77 |
| VIT_02s0241g00050.t01 | Wine grape | nucleus | 63.53 | 56.72 |
| KRH77421 | Soybean | cytosol | 60.49 | 55.73 |
| GSMUA_Achr9P20710_001 | Banana | cytosol | 53.98 | 55.34 |
| Solyc03g007180.1.1 | Tomato | nucleus | 58.9 | 53.91 |
| CDY26560 | Canola | nucleus | 58.03 | 53.68 |
| KRH38730 | Soybean | cytosol | 59.19 | 53.6 |
| Bra026973.1-P | Field mustard | nucleus | 57.89 | 53.55 |
| PGSC0003DMT400079650 | Potato | cytosol, nucleus, plastid | 58.47 | 53.51 |
| CDX98069 | Canola | nucleus | 57.31 | 53.15 |
| AT1G62870.1 | Thale cress | cytosol | 58.47 | 53.02 |
| KRG92459 | Soybean | cytosol, nucleus | 53.11 | 52.88 |
| KRH34341 | Soybean | cytosol, nucleus | 54.56 | 52.8 |
| CDY21048 | Canola | nucleus | 57.02 | 52.46 |
| CDY15994 | Canola | nucleus | 57.31 | 52.38 |
| KRH09233 | Soybean | nucleus | 56.44 | 52.35 |
| Bra016775.1-P | Field mustard | nucleus | 56.87 | 52.33 |
| CDY31263 | Canola | nucleus | 57.02 | 52.25 |
| CDY30075 | Canola | nucleus | 57.6 | 52.23 |
| Bra019761.1-P | Field mustard | nucleus | 57.16 | 52.18 |
| Solyc08g079550.1.1 | Tomato | nucleus | 61.65 | 51.89 |
| AT1G12380.1 | Thale cress | cytosol, nucleus, plastid | 59.48 | 51.83 |
| PGSC0003DMT400010029 | Potato | nucleus | 61.79 | 51.76 |
| KRG96010 | Soybean | cytosol | 5.64 | 48.15 |
| CDY68721 | Canola | nucleus | 17.95 | 44.77 |
| CDY46928 | Canola | cytosol | 17.51 | 44.49 |
| Bra027012.1-P | Field mustard | nucleus | 17.08 | 43.87 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P12300_001 | EnsemblPlants:GSMUA_Achr2T12300_001 | EnsemblPlantsGene:GSMUA_Achr2G12300_001 | InterPro:RNaseH-like_sf | PANTHER:PTHR32166 | PANTHER:PTHR32166:SF50 |
| SEG:seg | SUPFAM:SSF53098 | UniParc:UPI000295ADDE | UniProt:M0S7C1 | MapMan:35.2 | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G12300_001]
Coordinates
chr2:+:14781285..14783657
Molecular Weight (calculated)
76154.5 Da
IEP (calculated)
8.534
GRAVY (calculated)
-0.293
Length
691 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDSAAAAAT ATAGAGAVAE DVAAKAVHKR YEALTTVRSK AIKGKGAWYW AHLEPVMVQS ADTGLPKAVK LRCVLCDTVF SASNPSRTAS EHLKRGTCPN
101: FGSPSSSSAA TLAALKPISS IAPCSSSSTA SHHHHHHPNS RKRSSTSSPK ASPGPTLSKA QADSALSLLS DWFQESAGAG AVSLSSIEHP KFRAFLGQVG
201: LPPISRRDIV GRRLDARFDE ARAEADARTH DALFFQLAAD GWKPHDSSSG GDSIVSLTVN LPNGTTVFHR SVLTPARSPS QFAEVVLSHT IADISGEGAT
301: RRCVGIVADK FKSKALLNLE NQNQWLVNLS CQLQGFRSLI KDFARELPLF QTVAAKCHKL ATFFNTHSQV RSVFHKYQLQ ELDHACLLRD ILSSARALRS
401: VIHHESYELA CHDDPTARDC ADMIHDTGFW NELEAGHFLV KLFDDMLQEI KTERPLVGQC LPMWEELRSK VKNWCSKYGV KDGPVEKVVE KKFKKNYHPA
501: WSAAFILDPL YLVKDVSGKY LPPFKCLTAD QEKDVDKLIT RLVSREEAHI ALMELMKWRT EGLDPLYAQA VQVKQQDPVT GKLRIANPQS SRLVWETCLN
601: EFKSLGKVAV RIIFLHATAC GFKHNPSILR WVCARDRSRT SIDRMHKLVF VAAHAKLERR DFSSEEEKDS TLMNGEDDGL NDTAFAEASS V
101: FGSPSSSSAA TLAALKPISS IAPCSSSSTA SHHHHHHPNS RKRSSTSSPK ASPGPTLSKA QADSALSLLS DWFQESAGAG AVSLSSIEHP KFRAFLGQVG
201: LPPISRRDIV GRRLDARFDE ARAEADARTH DALFFQLAAD GWKPHDSSSG GDSIVSLTVN LPNGTTVFHR SVLTPARSPS QFAEVVLSHT IADISGEGAT
301: RRCVGIVADK FKSKALLNLE NQNQWLVNLS CQLQGFRSLI KDFARELPLF QTVAAKCHKL ATFFNTHSQV RSVFHKYQLQ ELDHACLLRD ILSSARALRS
401: VIHHESYELA CHDDPTARDC ADMIHDTGFW NELEAGHFLV KLFDDMLQEI KTERPLVGQC LPMWEELRSK VKNWCSKYGV KDGPVEKVVE KKFKKNYHPA
501: WSAAFILDPL YLVKDVSGKY LPPFKCLTAD QEKDVDKLIT RLVSREEAHI ALMELMKWRT EGLDPLYAQA VQVKQQDPVT GKLRIANPQS SRLVWETCLN
601: EFKSLGKVAV RIIFLHATAC GFKHNPSILR WVCARDRSRT SIDRMHKLVF VAAHAKLERR DFSSEEEKDS TLMNGEDDGL NDTAFAEASS V
001: MATTTNATTT ATQQQTQTQS PTQQPSAEEL ATKALQKRYE GLMMVRTKAV KGKGAWYWSH LEPILLHNTD TGFPKAVKLR CSLCDAVFSA SNPSRTASEH
101: LKRGTCPNFN SLPKPISTIS PSPPPPPSSS HRKRNSSAVE ALNHHHHHPH HHHQGSYNVT PLSVVDPSRF CGQFPVTQQP HLMLSGGKDD LGPLAMLEDS
201: VKKLKSPKTS QTRNLTKAQI DSALDSLSDW VFESCGSVSL SGLEHPKLRA FLTQVGLPII SRRDFVTGRL DLKYEDSRAE AESRIHDAMF FQIASDGWKF
301: DSSGENLVNL IVNLPNGTSL YRRAVFVNGA VPSNYAEEVL WETVRGICGN SPQRCVGIVS DRFMSKALRN LESQHQWMVN LSCQFQGFNS LIRDFVKELP
401: LFKSVSQSCS RLVNFVNSTA QIRNAVCKYQ LQEQGETRML HLPLDSSLFE PLYNLLEDVL SFARAIQLVM HDDVCKAVLM EDHMAREVGE MVGDVGFWNE
501: VEAVYLLLKL VKEMARRIEE ERPLVGQCLP LWDELRSKIK DWYAKFNVVE ERQVEKIVER RFKKSYHPAW AAAFILDPLY LIKDSSGKYL PPFKCLSPEQ
601: EKDVDKLITR LVSRDEAHIA MMELMKWRTE GLDPVYARAV QMKERDPVSG KMRIANPQSS RLVWETYLSE FRSLGRVAVR LIFLHATSCG FKCNSSVLRW
701: VNSNGRSRAA VDRAQKLIFI SANSKFERRD FSNEEERDAE LLAMANGEDD VLNDVLIDTS SV
101: LKRGTCPNFN SLPKPISTIS PSPPPPPSSS HRKRNSSAVE ALNHHHHHPH HHHQGSYNVT PLSVVDPSRF CGQFPVTQQP HLMLSGGKDD LGPLAMLEDS
201: VKKLKSPKTS QTRNLTKAQI DSALDSLSDW VFESCGSVSL SGLEHPKLRA FLTQVGLPII SRRDFVTGRL DLKYEDSRAE AESRIHDAMF FQIASDGWKF
301: DSSGENLVNL IVNLPNGTSL YRRAVFVNGA VPSNYAEEVL WETVRGICGN SPQRCVGIVS DRFMSKALRN LESQHQWMVN LSCQFQGFNS LIRDFVKELP
401: LFKSVSQSCS RLVNFVNSTA QIRNAVCKYQ LQEQGETRML HLPLDSSLFE PLYNLLEDVL SFARAIQLVM HDDVCKAVLM EDHMAREVGE MVGDVGFWNE
501: VEAVYLLLKL VKEMARRIEE ERPLVGQCLP LWDELRSKIK DWYAKFNVVE ERQVEKIVER RFKKSYHPAW AAAFILDPLY LIKDSSGKYL PPFKCLSPEQ
601: EKDVDKLITR LVSRDEAHIA MMELMKWRTE GLDPVYARAV QMKERDPVSG KMRIANPQSS RLVWETYLSE FRSLGRVAVR LIFLHATSCG FKCNSSVLRW
701: VNSNGRSRAA VDRAQKLIFI SANSKFERRD FSNEEERDAE LLAMANGEDD VLNDVLIDTS SV
Arabidopsis Description
F16P17.2 protein [Source:UniProtKB/TrEMBL;Acc:Q9LQ19]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.