CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38730	Soybean	cytosol	86.44	84.4
KRG92459	Soybean	cytosol, nucleus	66.44	71.33
KRH34341	Soybean	cytosol, nucleus	67.79	70.73
VIT_16s0022g01740.t01	Wine grape	nucleus	65.23	63.78
GSMUA_Achr2P03190_001	Banana	nucleus	42.68	58.56
PGSC0003DMT400079650	Potato	cytosol, nucleus, plastid	59.06	58.28
KRH28018	Soybean	nucleus	57.05	58.14
KRH57308	Soybean	nucleus	58.52	57.75
Solyc03g007180.1.1	Tomato	nucleus	58.39	57.62
KRH04039	Soybean	nucleus	58.39	57.46
GSMUA_Achr2P12300_001	Banana	nucleus	52.35	56.44
KRH77421	Soybean	cytosol	56.64	56.27
GSMUA_Achr9P20710_001	Banana	cytosol	49.26	54.45
GSMUA_Achr7P16500_001	Banana	plastid	40.81	52.87
Os04t0261400-01	Rice	cytosol	49.93	48.31
Zm00001d015889_P001	Maize	nucleus	51.41	48.3
KRG96010	Soybean	cytosol	5.23	48.15
Os02t0450000-01	Rice	extracellular	51.68	47.53
Zm00001d053254_P001	Maize	nucleus	50.6	47.07
Zm00001d004164_P001	Maize	cytosol	48.59	46.77
TraesCS2B01G073600.1	Wheat	cytosol	49.53	45.9
TraesCS2A01G059900.1	Wheat	cytosol	49.53	45.9
Zm00001d025091_P001	Maize	nucleus	47.52	45.74
TraesCSU01G024900.1	Wheat	nucleus	49.53	45.67

Protein Annotations

EMBL:ACUP02010275	EnsemblPlants:KRH09233	EnsemblPlantsGene:GLYMA_16G204700	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
InterPro:RNaseH-like_sf	PANTHER:PTHR32166	PANTHER:PTHR32166:SF50	ProteinID:KRH09233	ProteinID:KRH09233.1	SEG:seg
SUPFAM:SSF53098	UniParc:UPI0002965EE8	UniProt:I1MQ90	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr16:+:36570193..36572473

Molecular Weight (calculated)

83495.4 Da

IEP (calculated)

8.442

GRAVY (calculated)

-0.295

Length

745 amino acids

Sequence
(BLAST)

001: MTSTTTSTST DPLPFSSDAG ALRAINKRFE GLLTVRTKAM KGKGAWYWAH LEPILVPHPD TGLPKSVKLK CSLCDSLFSS SNPSRTASEH FKRGTCSNFT
101: SSLRPPSPLP ISSITPAPRK RPSPATSPPS YQNHSLPILH SSHFQISHAN TAHSHNHHHH HQHLMLSGGK DDLCALAMFE DSVKKLKSPK TSPGPALSKD
201: QVNSALDLLF DWFYENSVSL SMIEHRKFQA FLSQVGLPNK LGREISGERL DARFVEAKAE SEARIRDAMF FQLASDGWKC GDWFNLDFCC GGDCGGVGGG
301: ESLVKFVVNL PNGSSVFQKA VFNGGVENSK YAEERCVGIV ADKFKAKALR NLEVQHHWMV NTACQLQGLT SLIKDFNCEL PLFRVVIENC LKVANFIDNE
401: LHVRSVFLKY RMQEMDCGGL IRVPSPKCDP LKNFGVAFPT LEDTLSCARV IQRVVMEDGF KVMCMEDPLA REVAGMVQNE GFWNELEAVY SLVRLVKGMV
501: QDVETERPLI GRCLSLWEEL RSKVKEWCGK YNIVEGHAEK IVEKRFRKNY HPAWAAAFIL DPLYLVKDAS GKYLPPYKCL TREQEKDVDK LLTRLASREE
601: AHVVLMELMK WRSEGLDPLY AQAVQMKQKD PVTGKMKVAN PLSSRLVWET CLSEFKSLGK IAVRLIFLHA TSSGFKSNSS FTRKVSANKH SRVTLERAQK
701: IIYIAAHAKL ERRDFSNGEE KDAELFVMSN SEDDMLEVYA DAPLV

Best Arabidopsis Sequence Match ( AT1G12380.1 )
(BLAST)

001: MATTNAHTAT QQTPPPPPPP PPAPAPPAMD GLTTDELTAK ALNKRYEGLM TVRTKAVKGK GAWYWTHLEP ILVRNTDTGL PKAVKLRCSL CDAVFSASNP
101: SRTASEHLKR GTCPNFNSVT PISTITPSPT SSSSSPQTHH RKRNSSGAVT TAIPSRLNPP PIGGSYHVTP ITVVDPSRFC GGELHYSTPP PPQHLMLSGG
201: KDDLGPLAML EDSVKKLKSP KPSQTQSLTR SQIESALDSL SDWVFESCGS VSLSGLEHPK FRAFLTQVGL PIISKRDFAT TRLDLKHEEA RAEAESRIRD
301: AMFFQISSDG WKPGESGESL VNLIVNLPNG TSLYRRAVLV NGAVPSNYAE EVLLETVKGI CGNSPQRCVG IVSDKFKTKA LRNLESQHQW MVNLSCQFQG
401: LNSLIKDFVK ELPLFKSVSQ NCVRLAKFIN NTAQIRNAHC KYQLQEHGES IMLRLPLHCY YDDERRSCSS SSSGSNKVCF YEPLFNLLED VLSSARAIQL
501: VVHDDACKVV LMEDHMAREV REMVGDEGFW NEVEAVHALI KLVKEMARRI EEEKLLVGQC LPLWDELRAK VKDWDSKFNV GEGHVEKVVE RRFKKSYHPA
601: WAAAFILDPL YLIRDSSGKY LPPFKCLSPE QEKDVDKLIT RLVSRDEAHI ALMELMKWRT EGLDPMYARA VQMKERDPVS GKMRIANPQS SRLVWETYLS
701: EFRSLGKVAV RLIFLHATTG GFKCNSSLLK WVNSNGRSHA AVDRAQKLIF ISANSKFERR DFSNEEDRDA ELLAMANGDD HMLNDVLVDT SSV

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62870.1); Has 173 Blast hits to 170 proteins in 34 species: Archae - 0; Bacteria - 4; Metazoa - 25; Fungi - 8; Plants - 123; Viruses - 7; Other Eukaryotes - 6 (so /.../NCBI BLink). [Source:TAIR;Acc:AT1G12380]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.