Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92459 | Soybean | cytosol, nucleus | 91.46 | 94.09 |
| KRH38730 | Soybean | cytosol | 74.51 | 69.72 |
| KRH09233 | Soybean | nucleus | 70.73 | 67.79 |
| VIT_16s0022g01740.t01 | Wine grape | nucleus | 66.25 | 62.07 |
| PGSC0003DMT400079650 | Potato | cytosol, nucleus, plastid | 61.62 | 58.28 |
| KRH28018 | Soybean | nucleus | 59.66 | 58.28 |
| Solyc03g007180.1.1 | Tomato | nucleus | 61.2 | 57.88 |
| KRH77421 | Soybean | cytosol | 59.8 | 56.93 |
| GSMUA_Achr2P03190_001 | Banana | nucleus | 42.86 | 56.35 |
| KRH57308 | Soybean | nucleus | 58.26 | 55.1 |
| KRH04039 | Soybean | nucleus | 58.4 | 55.09 |
| GSMUA_Achr2P12300_001 | Banana | nucleus | 52.8 | 54.56 |
| GSMUA_Achr9P20710_001 | Banana | cytosol | 50.56 | 53.56 |
| GSMUA_Achr7P16500_001 | Banana | plastid | 40.06 | 49.74 |
| Zm00001d004164_P001 | Maize | cytosol | 52.24 | 48.19 |
| Os04t0261400-01 | Rice | cytosol | 51.96 | 48.18 |
| Zm00001d015889_P001 | Maize | nucleus | 53.36 | 48.05 |
| Zm00001d025091_P001 | Maize | nucleus | 51.26 | 47.29 |
| Zm00001d053254_P001 | Maize | nucleus | 52.66 | 46.94 |
| Os02t0450000-01 | Rice | extracellular | 52.8 | 46.54 |
| TraesCS2B01G073600.1 | Wheat | cytosol | 52.24 | 46.39 |
| TraesCS2A01G059900.1 | Wheat | cytosol | 52.1 | 46.27 |
| TraesCSU01G024900.1 | Wheat | nucleus | 51.82 | 45.79 |
| KRG96010 | Soybean | cytosol | 5.04 | 44.44 |
Protein Annotations
| EMBL:ACUP02006591 | EnsemblPlants:KRH34341 | EnsemblPlantsGene:GLYMA_10G177600 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:RNaseH-like_sf | PANTHER:PTHR32166 | PANTHER:PTHR32166:SF15 | ProteinID:KRH34341 | ProteinID:KRH34341.1 | SEG:seg |
| SUPFAM:SSF53098 | UniParc:UPI000233D36A | UniProt:A0A0R0I2V4 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr10:-:41096750..41098894
Molecular Weight (calculated)
79296.6 Da
IEP (calculated)
8.055
GRAVY (calculated)
-0.124
Length
714 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTSAAEPD PDAAARKRYE GLLTVRTRAI KGKGAWYWAH LEPMLLNNAV KLKCSLCDSL FSASNPSRTA SEHLKRGACP NFNHSSLPSP SPISTVLSHS
101: HSNNGRKRTS TSTSNSPNQD HSVQHLVLSG GKDDLCALAV FEDSVKKLKS PRNLSHVAPP ELTKDQVNSA VELLADWFYE SCGSVPLSAL EHPKFQSFLT
201: QLGLPVTLLR REIYGSRLDD RFGLAKAESE TRMRDAMFFQ VGCDGWKGED GVVKFIVNLP NGTSVFNKVV FGGGGGVVSS KYAEEILWEL VSGVCGSDVQ
301: RCVGVVADRF KGKALRNLEV QNHWMVNVAC QVQGFMGLIK DFSIGLPLFS VVTENCLKVA NFINTESQVR SSFLRYRMQE LECAGLVRVP SPKCHVLKDF
401: AASVFPMLED ILSCAAVIQM VVLEDTFKVA CMEDPLAREV AGIVQSEGFW NELEAVYSLV KLIRGVVQDI GAERPLIGRC LPLWEEVRTK VVKEWCVKYS
501: VAEAPVVEIL EKRFRKNYHP AWSAAFILDP LYLVKDASGK YLPPFNCLTR EQEKDVDKLL TRLASREEAH VVLMELMKWR SEGLDPLYAQ AVQMKQRDPV
601: TGKMKVANPL SSRLVWETCL SEFKSLGKLA VRLIFLHGTS SGFKSNCSFI RKISANKHSR VSLERALKVV YIAAHAKLER RDFSNEEEKE AELLAREGSD
701: DGMLAEVFAD APLL
101: HSNNGRKRTS TSTSNSPNQD HSVQHLVLSG GKDDLCALAV FEDSVKKLKS PRNLSHVAPP ELTKDQVNSA VELLADWFYE SCGSVPLSAL EHPKFQSFLT
201: QLGLPVTLLR REIYGSRLDD RFGLAKAESE TRMRDAMFFQ VGCDGWKGED GVVKFIVNLP NGTSVFNKVV FGGGGGVVSS KYAEEILWEL VSGVCGSDVQ
301: RCVGVVADRF KGKALRNLEV QNHWMVNVAC QVQGFMGLIK DFSIGLPLFS VVTENCLKVA NFINTESQVR SSFLRYRMQE LECAGLVRVP SPKCHVLKDF
401: AASVFPMLED ILSCAAVIQM VVLEDTFKVA CMEDPLAREV AGIVQSEGFW NELEAVYSLV KLIRGVVQDI GAERPLIGRC LPLWEEVRTK VVKEWCVKYS
501: VAEAPVVEIL EKRFRKNYHP AWSAAFILDP LYLVKDASGK YLPPFNCLTR EQEKDVDKLL TRLASREEAH VVLMELMKWR SEGLDPLYAQ AVQMKQRDPV
601: TGKMKVANPL SSRLVWETCL SEFKSLGKLA VRLIFLHGTS SGFKSNCSFI RKISANKHSR VSLERALKVV YIAAHAKLER RDFSNEEEKE AELLAREGSD
701: DGMLAEVFAD APLL
001: MATTNAHTAT QQTPPPPPPP PPAPAPPAMD GLTTDELTAK ALNKRYEGLM TVRTKAVKGK GAWYWTHLEP ILVRNTDTGL PKAVKLRCSL CDAVFSASNP
101: SRTASEHLKR GTCPNFNSVT PISTITPSPT SSSSSPQTHH RKRNSSGAVT TAIPSRLNPP PIGGSYHVTP ITVVDPSRFC GGELHYSTPP PPQHLMLSGG
201: KDDLGPLAML EDSVKKLKSP KPSQTQSLTR SQIESALDSL SDWVFESCGS VSLSGLEHPK FRAFLTQVGL PIISKRDFAT TRLDLKHEEA RAEAESRIRD
301: AMFFQISSDG WKPGESGESL VNLIVNLPNG TSLYRRAVLV NGAVPSNYAE EVLLETVKGI CGNSPQRCVG IVSDKFKTKA LRNLESQHQW MVNLSCQFQG
401: LNSLIKDFVK ELPLFKSVSQ NCVRLAKFIN NTAQIRNAHC KYQLQEHGES IMLRLPLHCY YDDERRSCSS SSSGSNKVCF YEPLFNLLED VLSSARAIQL
501: VVHDDACKVV LMEDHMAREV REMVGDEGFW NEVEAVHALI KLVKEMARRI EEEKLLVGQC LPLWDELRAK VKDWDSKFNV GEGHVEKVVE RRFKKSYHPA
601: WAAAFILDPL YLIRDSSGKY LPPFKCLSPE QEKDVDKLIT RLVSRDEAHI ALMELMKWRT EGLDPMYARA VQMKERDPVS GKMRIANPQS SRLVWETYLS
701: EFRSLGKVAV RLIFLHATTG GFKCNSSLLK WVNSNGRSHA AVDRAQKLIF ISANSKFERR DFSNEEDRDA ELLAMANGDD HMLNDVLVDT SSV
101: SRTASEHLKR GTCPNFNSVT PISTITPSPT SSSSSPQTHH RKRNSSGAVT TAIPSRLNPP PIGGSYHVTP ITVVDPSRFC GGELHYSTPP PPQHLMLSGG
201: KDDLGPLAML EDSVKKLKSP KPSQTQSLTR SQIESALDSL SDWVFESCGS VSLSGLEHPK FRAFLTQVGL PIISKRDFAT TRLDLKHEEA RAEAESRIRD
301: AMFFQISSDG WKPGESGESL VNLIVNLPNG TSLYRRAVLV NGAVPSNYAE EVLLETVKGI CGNSPQRCVG IVSDKFKTKA LRNLESQHQW MVNLSCQFQG
401: LNSLIKDFVK ELPLFKSVSQ NCVRLAKFIN NTAQIRNAHC KYQLQEHGES IMLRLPLHCY YDDERRSCSS SSSGSNKVCF YEPLFNLLED VLSSARAIQL
501: VVHDDACKVV LMEDHMAREV REMVGDEGFW NEVEAVHALI KLVKEMARRI EEEKLLVGQC LPLWDELRAK VKDWDSKFNV GEGHVEKVVE RRFKKSYHPA
601: WAAAFILDPL YLIRDSSGKY LPPFKCLSPE QEKDVDKLIT RLVSRDEAHI ALMELMKWRT EGLDPMYARA VQMKERDPVS GKMRIANPQS SRLVWETYLS
701: EFRSLGKVAV RLIFLHATTG GFKCNSSLLK WVNSNGRSHA AVDRAQKLIF ISANSKFERR DFSNEEDRDA ELLAMANGDD HMLNDVLVDT SSV
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62870.1); Has 173 Blast hits to 170 proteins in 34 species: Archae - 0; Bacteria - 4; Metazoa - 25; Fungi - 8; Plants - 123; Viruses - 7; Other Eukaryotes - 6 (so /.../NCBI BLink). [Source:TAIR;Acc:AT1G12380]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.