Factsheet for GSMUA_Achr2P03190_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P20710_001	Banana	cytosol	78.45	63.2
GSMUA_Achr7P16500_001	Banana	plastid	53.04	50.09
GSMUA_Achr2P12300_001	Banana	nucleus	58.56	46.02
VIT_16s0022g01740.t01	Wine grape	nucleus	63.54	45.28
VIT_02s0241g00050.t01	Wine grape	nucleus	63.35	44.44
KRH28018	Soybean	nucleus	59.67	44.32
KRH57308	Soybean	nucleus	61.33	44.11
KRG92459	Soybean	cytosol, nucleus	55.8	43.66
KRH04039	Soybean	nucleus	60.41	43.33
KRH77421	Soybean	cytosol	59.48	43.07
KRH34341	Soybean	cytosol, nucleus	56.35	42.86
KRH09233	Soybean	nucleus	58.56	42.68
KRH38730	Soybean	cytosol	59.67	42.46
CDX98069	Canola	nucleus	57.83	42.15
PGSC0003DMT400079650	Potato	cytosol, nucleus, plastid	58.56	42.12
Solyc03g007180.1.1	Tomato	nucleus	58.01	41.72
Os04t0261400-01	Rice	cytosol	59.12	41.69
CDY26560	Canola	nucleus	57.27	41.63
Bra026973.1-P	Field mustard	nucleus	57.27	41.63
Bra019761.1-P	Field mustard	nucleus	57.83	41.48
CDY21048	Canola	nucleus	57.27	41.41
CDY31263	Canola	nucleus	57.46	41.38
AT1G62870.1	Thale cress	cytosol	58.01	41.34
Bra016775.1-P	Field mustard	nucleus	57.09	41.28
Bra027012.1-P	Field mustard	nucleus	20.44	41.26
Os02t0450000-01	Rice	extracellular	61.33	41.11
Zm00001d025091_P001	Maize	nucleus	58.56	41.09
Zm00001d004164_P001	Maize	cytosol	58.56	41.09
CDY30075	Canola	nucleus	57.64	41.08
Solyc08g079550.1.1	Tomato	nucleus	61.88	40.93
KRG96010	Soybean	cytosol	6.08	40.74
PGSC0003DMT400010029	Potato	nucleus	61.51	40.48
Zm00001d015889_P001	Maize	nucleus	59.12	40.48
CDY15994	Canola	nucleus	56.35	40.48
CDY46928	Canola	cytosol	20.07	40.07
CDY68721	Canola	nucleus	20.26	39.71
TraesCS2A01G059900.1	Wheat	cytosol	58.56	39.55
Zm00001d053254_P001	Maize	nucleus	58.2	39.45
TraesCS2B01G073600.1	Wheat	cytosol	58.38	39.43
AT1G12380.1	Thale cress	cytosol, nucleus, plastid	57.46	39.34
TraesCSU01G024900.1	Wheat	nucleus	58.38	39.23

Protein Annotations

EnsemblPlants:GSMUA_Achr2P03190_001	EnsemblPlants:GSMUA_Achr2T03190_001	EnsemblPlantsGene:GSMUA_Achr2G03190_001	PANTHER:PTHR32166	PANTHER:PTHR32166:SF50	SEG:seg
UniParc:UPI000295B5B2	UniProt:M0S4R0	MapMan:35.2	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G03190_001]

Coordinates

chr2:+:8869545..8871722

Molecular Weight (calculated)

59309.1 Da

IEP (calculated)

7.302

GRAVY (calculated)

-0.164

Length

543 amino acids

Sequence
(BLAST)

001: MESEAKESAG GGGEAEDATA RAARKRYERL VAVRCKATKG KGAWYWAHLE PILVTPAGSS QPSAAKLRCA LCSALFSASN PSRTASEHLK RGACPNFSSP
101: SSAGPASAAL PLLLSGGKDD LVALARLEDS VKKLKSPMAS PAAALSKPQA DAALALLADW LLESASAVSP SALDHPKFQS FLNQVGLSSI SPRQLTLSHL
201: QARYLEVLSE SDARIRDAAF FQLASDGWKS SARPSEYALV SLVVNLPNGT ALFHRSMAVL DEDYKVVCLE EPSAREMAEL IQDGGFWTES EAVNSLVKLL
301: KAMAREIEME RPLIGHCLPL WDELRSKVRE WSAKYGIDGG LVDNVIEKRF TKNYHLAWSA AFVLDPLFLI KDTSGKYLPP FKLLTPEQEK DVDRLITQLV
401: SPEEAHIVLM EMMKWRSEGL DPLYAQAVQV KQHDPSTGKM RIANPQSRRL VWETCLSEFK CLRKVAVRLI FLHATSCGLK RNSALTRWMC AHAQSGVAQK
501: MAFLTAHSRI GRGDFLGEEE KDAELFGAGE DDVLNEFAGA SAV

Best Arabidopsis Sequence Match ( AT1G62870.1 )
(BLAST)

001: MATTTNATTT ATQQQTQTQS PTQQPSAEEL ATKALQKRYE GLMMVRTKAV KGKGAWYWSH LEPILLHNTD TGFPKAVKLR CSLCDAVFSA SNPSRTASEH
101: LKRGTCPNFN SLPKPISTIS PSPPPPPSSS HRKRNSSAVE ALNHHHHHPH HHHQGSYNVT PLSVVDPSRF CGQFPVTQQP HLMLSGGKDD LGPLAMLEDS
201: VKKLKSPKTS QTRNLTKAQI DSALDSLSDW VFESCGSVSL SGLEHPKLRA FLTQVGLPII SRRDFVTGRL DLKYEDSRAE AESRIHDAMF FQIASDGWKF
301: DSSGENLVNL IVNLPNGTSL YRRAVFVNGA VPSNYAEEVL WETVRGICGN SPQRCVGIVS DRFMSKALRN LESQHQWMVN LSCQFQGFNS LIRDFVKELP
401: LFKSVSQSCS RLVNFVNSTA QIRNAVCKYQ LQEQGETRML HLPLDSSLFE PLYNLLEDVL SFARAIQLVM HDDVCKAVLM EDHMAREVGE MVGDVGFWNE
501: VEAVYLLLKL VKEMARRIEE ERPLVGQCLP LWDELRSKIK DWYAKFNVVE ERQVEKIVER RFKKSYHPAW AAAFILDPLY LIKDSSGKYL PPFKCLSPEQ
601: EKDVDKLITR LVSRDEAHIA MMELMKWRTE GLDPVYARAV QMKERDPVSG KMRIANPQSS RLVWETYLSE FRSLGRVAVR LIFLHATSCG FKCNSSVLRW
701: VNSNGRSRAA VDRAQKLIFI SANSKFERRD FSNEEERDAE LLAMANGEDD VLNDVLIDTS SV

Arabidopsis Description

F16P17.2 protein [Source:UniProtKB/TrEMBL;Acc:Q9LQ19]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.