Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0039g01140.t01 | Wine grape | cytosol | 100.0 | 15.66 |
| VIT_08s0007g07180.t01 | Wine grape | cytosol | 92.31 | 1.27 |
Protein Annotations
| ArrayExpress:VIT_02s0109g00320 | EnsemblPlants:VIT_02s0109g00320.t01 | EnsemblPlantsGene:VIT_02s0109g00320 | ProteinID:CCB48241.1 | UniParc:UPI0002109026 | UniProt:F6H7Q7 |
| MapMan:35.2 | : | : | : | : | : |
Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F6H7Q7]
Coordinates
chr2:+:12870399..12870921
Molecular Weight (calculated)
1368.6 Da
IEP (calculated)
9.700
GRAVY (calculated)
-0.492
Length
13 amino acids
Sequence
(BLAST)
(BLAST)
1: MSSSNAQALN SMK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.