Factsheet for VIT_03s0038g01520.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g01550.t01	Wine grape	cytosol	64.32	67.46
VIT_03s0038g01540.t01	Wine grape	cytosol	29.07	64.89
VIT_03s0038g01610.t01	Wine grape	cytosol	33.19	60.96
VIT_03s0038g01670.t01	Wine grape	cytosol	37.09	57.67
VIT_03s0038g01630.t01	Wine grape	cytosol	49.46	51.41
VIT_03s0038g01530.t01	Wine grape	cytosol	51.19	41.96
VIT_15s0045g00980.t01	Wine grape	cytosol	24.73	38.19
VIT_09s0096g00930.t01	Wine grape	cytosol, endoplasmic reticulum	9.76	37.82
VIT_16s0022g01330.t01	Wine grape	cytosol	25.49	37.12
VIT_15s0046g03660.t01	Wine grape	cytosol	32.86	36.03
VIT_13s0067g00780.t01	Wine grape	cytosol	29.18	35.87
VIT_15s0046g02800.t01	Wine grape	cytosol	26.68	35.86
VIT_13s0067g00760.t01	Wine grape	cytosol, plastid	30.48	35.57
GSMUA_AchrUn_...	Banana	cytosol	10.52	35.4
VIT_13s0067g00810.t01	Wine grape	cytosol	35.36	35.28
VIT_15s0045g00810.t01	Wine grape	cytosol	16.16	34.98
VIT_13s0067g00790.t01	Wine grape	cytosol	36.01	34.91
VIT_15s0045g01020.t01	Wine grape	cytosol	24.3	34.84
VIT_03s0038g01400.t01	Wine grape	cytosol	32.86	34.83
PGSC0003DMT400021403	Potato	cytosol	35.68	34.63
TraesCS2D01G510100.1	Wheat	cytosol	18.22	34.5
Os11t0633500-01	Rice	cytosol	19.74	34.47
VIT_15s0046g02750.t01	Wine grape	cytosol	34.71	34.19
VIT_00s0448g00020.t01	Wine grape	cytosol	34.92	34.15
VIT_15s0046g02820.t01	Wine grape	cytosol	34.6	33.79
VIT_15s0021g00130.t01	Wine grape	cytosol, nucleus, plastid	11.39	33.76
VIT_13s0067g00740.t01	Wine grape	extracellular	20.39	33.75
TraesCS2D01G510300.1	Wheat	cytosol	19.85	33.46
VIT_13s0067g00750.t01	Wine grape	cytosol	13.67	33.42
VIT_15s0046g02730.t01	Wine grape	cytosol	33.3	33.37
GSMUA_Achr7P20240_001	Banana	mitochondrion	24.95	32.9
TraesCS6B01G447800.1	Wheat	cytosol	18.98	32.89
GSMUA_Achr7P20230_001	Banana	cytosol	31.67	32.88
VIT_15s0045g00880.t01	Wine grape	cytosol	26.79	32.72
TraesCS7A01G562500.1	Wheat	cytosol	19.63	32.61
TraesCS2B01G536900.1	Wheat	cytosol	19.52	32.55
VIT_15s0046g02810.t01	Wine grape	cytosol	32.97	32.44
VIT_15s0045g00680.t01	Wine grape	cytosol	27.01	32.21
TraesCS2D01G510000.1	Wheat	cytosol	26.9	32.21
GSMUA_Achr7P20220_001	Banana	cytosol	31.13	31.92
GSMUA_AchrUn_...	Banana	cytosol	25.81	31.73
VIT_15s0045g00920.t01	Wine grape	cytosol	17.9	31.73
VIT_15s0045g00640.t01	Wine grape	cytosol	16.49	31.47
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	25.81	31.44
TraesCS2A01G477200.1	Wheat	cytosol	22.89	31.21
TraesCS6B01G448100.1	Wheat	cytosol	26.57	31.09
TraesCS1B01G336700.1	Wheat	cytosol	26.9	30.92
TraesCS6B01G447900.1	Wheat	cytosol	24.51	30.83
TraesCS2B01G151600.2	Wheat	cytosol	28.31	30.81
VIT_15s0045g01010.t01	Wine grape	cytosol	6.4	30.57
TraesCS7B01G501900.1	Wheat	cytosol	28.74	30.42
TraesCS7B01G423500.1	Wheat	cytosol	28.42	30.25
TraesCS7B01G501000.1	Wheat	cytosol	28.52	30.09
TraesCS7A01G562000.1	Wheat	cytosol	28.52	30.06
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	25.6	29.84
TraesCS1D01G324700.2	Wheat	cytosol	28.09	29.77
TraesCS7B01G500900.1	Wheat	cytosol	28.2	29.71
TraesCS7B01G500700.1	Wheat	cytosol	27.33	29.68
TraesCS7B01G501100.1	Wheat	cytosol	27.98	29.62
HORVU2Hr1G022620.8	Barley	cytosol	27.98	29.62
TraesCS7B01G449900.2	Wheat	cytosol	28.42	29.6
TraesCS6D01G387500.1	Wheat	cytosol, plastid	25.38	29.58
TraesCS6D01G387400.1	Wheat	cytosol	18.22	29.42
TraesCS7B01G500800.1	Wheat	cytosol	22.99	29.4
TraesCS1A01G323600.1	Wheat	cytosol	27.55	29.16
TraesCS7A01G561700.1	Wheat	cytosol	27.44	29.15
TraesCS7A01G561900.4	Wheat	cytosol	28.96	29.09
TraesCS6A01G404000.1	Wheat	cytosol	17.25	29.07
TraesCS7D01G548100.1	Wheat	cytosol	27.87	28.91
HORVU1Hr1G075170.1	Barley	cytosol	27.22	28.85
OQU82378	Sorghum	nucleus	25.7	28.28
TraesCS7B01G501200.1	Wheat	cytosol	16.7	28.0
TraesCS6B01G448000.1	Wheat	cytosol	8.13	27.68
TraesCS2A01G459100.1	Wheat	plastid	23.75	27.55
TraesCS7B01G501300.1	Wheat	cytosol	8.24	27.54
TraesCS6B01G448400.1	Wheat	cytosol	25.16	27.36
Os10t0183000-01	Rice	plasma membrane	26.36	27.18
TraesCS5D01G269100.1	Wheat	cytosol	20.17	27.0
TraesCS2B01G507100.1	Wheat	cytosol	27.66	26.87
TraesCS2A01G129300.1	Wheat	cytosol	7.27	26.8
TraesCS2D01G481300.1	Wheat	cytosol	27.66	26.65
TraesCS5A01G261700.1	Wheat	cytosol	24.95	26.11
HORVU5Hr1G072540.26	Barley	cytosol	24.84	26.05
Os03t0709200-01	Rice	cytosol	26.9	25.86
TraesCS5A01G261600.1	Wheat	cytosol	24.51	25.65
TraesCS5B01G259900.1	Wheat	cytosol	25.6	25.4
TraesCS2B01G507000.1	Wheat	cytosol	20.07	25.31
Zm00001d045512_P001	Maize	cytosol, mitochondrion	20.93	23.17
VIT_13s0067g00830.t01	Wine grape	cytosol	34.49	23.11

Protein Annotations

Gene3D:1.10.8.430	EntrezGene:100260633	wikigene:100260633	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1
ProteinID:CCB60662	ProteinID:CCB60662.1	ncoils:Coil	UniProt:F6I146	EMBL:FN596508	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950
GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0043531	InterPro:IPR032675	EntrezGene:LOC100260633	wikigene:LOC100260633	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF7	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000210973D	ArrayExpress:VIT_03s0038g01520	EnsemblPlantsGene:VIT_03s0038g01520	EnsemblPlants:VIT_03s0038g01520.t01
RefSeq:XP_002276742	RefSeq:XP_002276742.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3:-:1044307..1047456

Molecular Weight (calculated)

107131.0 Da

IEP (calculated)

8.445

GRAVY (calculated)

-0.332

Length

922 amino acids

Sequence
(BLAST)

001: MERAVISFVV NRIGDQLMEE AIFLKEVRPR IERLHRDLKA INCFLEAADA KQEEDPRVRN WVSDIRDVAY DAEDVVDMFI LKAEALRRKI FVKRIFQKPV
101: YLHNLGKKID EIQTNLHDIS RRREILGIKN IGVGTSTSSQ MLQNLRRTTP RAEKHVIVGL NEEANKLVEQ LTTGDPRRRV VSIVGMGGIG KTTLAKKVYN
201: HSRVMDHFQS CRVWVYVSED CRPRNIFQQI LNQLLHNPKQ IEKLQENELE DLLHEHLEEK RFLVVLDDIW KSDDWKCLAR VFPEESNGSR LLLTTRNKDV
301: ALQADARSVP HDMQLLSEEE GWKLFCRTAI PDNVTDGCPP ELKEFGEKMV KKCAGLPLAI VVLGGLLSSK KQLPTMWEEV FNKLRVHFAA RNGVDAILSL
401: SYIDLPHNLK SCFLYLGLFP EDQVISKRTL LLLWMAEGFV PQQDEQRLED TAEDYLNELI NRNLVQAVAV SVNERVTECR IHDLVRDLCI KKAKEQNFVE
501: IQKDIVSLPS TTSSFPFTKS RRLGIYLDLE RYASREHSTP YIRSLFFFLL QRSPHSRYYG ILSWLDFIYK YYKLLRVLDL GNVKIYEPPN SFGKLVHLRY
601: LRLTAHRYSN CPPSCLGSLQ DCVNFPTSLD ELRSLQTLDI CISKGTPTMI EKMKNLRHLF LSYDREDDKP LRIDNLRNLQ TLSGIWFSDW QQNDTSDLTS
701: LRKLKIKMDD AIVVEFSNSI AKLENLRSLY LKASHFSGVP SFDMSSLLHL SKLHMERSIG QLHEFPPNLT QLTLEDTELD YDPMVILEKL PKLLTLRLRM
801: WSYRGWEMQV SADGFPQLKI LQLSDLYGPT KLLIIEKGGM SNLTQLQIFR SVLDIYGLGE LLHLKRIDVI DISPHSHRWI SSLPCSSEWQ DIRRRKKARI
901: YGTYTANDSW GYMQQHKKID FR

Best Arabidopsis Sequence Match ( AT3G46530.1 )
(BLAST)

001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC

Arabidopsis Description

RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.