Factsheet for VIT_13s0067g00740.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0067g00760.t01	Wine grape	cytosol, plastid	86.71	61.14
CDY38707	Canola	cytosol, extracellular	2.33	48.15
VIT_13s0067g00790.t01	Wine grape	cytosol	67.33	39.43
VIT_13s0067g00780.t01	Wine grape	cytosol	52.24	38.8
VIT_13s0067g00810.t01	Wine grape	cytosol	62.3	37.55
CDY45137	Canola	cytosol	9.52	35.81
Bra005278.1-P	Field mustard	cytosol	29.8	31.92
CDX86269	Canola	cytosol	33.75	30.23
VIT_03s0038g01400.t01	Wine grape	cytosol	46.86	30.0
CDY38706	Canola	cytosol	21.36	29.38
CDY45136	Canola	extracellular, golgi	21.18	29.06
Bra027843.1-P	Field mustard	cytosol, mitochondrion	31.24	27.88
CDY00088	Canola	cytosol	32.32	27.78
VIT_15s0045g01020.t01	Wine grape	cytosol	29.8	25.82
TraesCS7B01G501200.1	Wheat	cytosol	25.31	25.64
VIT_13s0067g00830.t01	Wine grape	cytosol	63.02	25.51
KRH01327	Soybean	cytosol	41.29	25.03
VIT_16s0022g01330.t01	Wine grape	cytosol	28.37	24.96
GSMUA_Achr7P20240_001	Banana	mitochondrion	30.88	24.61
KRH45065	Soybean	cytosol	34.65	24.59
KRH37369	Soybean	extracellular	32.5	23.32
AT1G10920.4	Thale cress	cytosol	30.34	23.25
CDY66057	Canola	cytosol	30.52	22.85
Bra005270.1-P	Field mustard	cytosol	33.03	22.83
Bra005273.1-P	Field mustard	cytosol	33.93	22.63
CDY26957	Canola	cytosol	22.62	22.62
KRH12365	Soybean	endoplasmic reticulum	39.14	22.27
TraesCS6D01G387400.1	Wheat	cytosol	22.8	22.24
AT1G59620.2	Thale cress	cytosol	29.44	22.16
Bra037451.1-P	Field mustard	cytosol	33.03	22.09
GSMUA_AchrUn_...	Banana	cytosol	10.77	21.9
CDY05433	Canola	cytosol	26.21	21.82
AT1G53350.1	Thale cress	cytosol	35.19	21.63
AT1G58410.2	Thale cress	cytosol	34.83	21.58
CDY45054	Canola	cytosol	32.14	21.44
VIT_15s0046g03660.t01	Wine grape	cytosol	32.32	21.4
CDY24492	Canola	cytosol	31.06	21.36
AT5G43470.1	Thale cress	cytosol	34.65	21.26
TraesCS6A01G404000.1	Wheat	cytosol	20.83	21.21
Bra013134.1-P	Field mustard	cytosol, nucleus, peroxisome	34.65	21.19
AT5G35450.1	Thale cress	cytosol	34.11	21.09
AT5G48620.1	Thale cress	cytosol	34.11	20.93
Bra014241.1-P	Field mustard	cytosol	34.65	20.86
CDX92335	Canola	cytosol	32.32	20.79
AT1G59780.1	Thale cress	cytosol	33.75	20.75
CDY48845	Canola	nucleus	33.39	20.71
AT1G58390.1	Thale cress	cytosol	33.57	20.62
VIT_03s0038g01550.t01	Wine grape	cytosol	32.5	20.59
CDY05420	Canola	cytosol	20.65	20.57
Bra035424.1-P	Field mustard	cytosol	33.21	20.56
CDY28958	Canola	cytosol	32.5	20.54
CDY66072	Canola	cytosol	31.06	20.5
CDX93129	Canola	cytosol	34.65	20.49
Bra027866.1-P	Field mustard	cytosol	34.11	20.45
AT1G58400.2	Thale cress	cytosol	33.39	20.44
CDY03593	Canola	cytosol	31.78	20.44
Bra036206.1-P	Field mustard	cytosol	32.85	20.4
VIT_03s0038g01520.t01	Wine grape	cytosol	33.75	20.39
CDY33605	Canola	cytosol	31.06	20.38
CDY66341	Canola	nucleus	27.83	20.23
TraesCS2B01G507000.1	Wheat	cytosol	26.03	19.84
AT1G50180.1	Thale cress	cytosol	30.34	19.72
GSMUA_Achr7P20230_001	Banana	cytosol	31.24	19.59
GSMUA_Achr7P20220_001	Banana	cytosol	31.42	19.47
CDY19984	Canola	cytosol	32.85	19.34
GSMUA_AchrUn_...	Banana	cytosol	26.03	19.33
VIT_03s0038g01630.t01	Wine grape	cytosol	30.7	19.28
Bra027834.1-P	Field mustard	cytosol	33.75	19.13
VIT_15s0046g02730.t01	Wine grape	cytosol	31.06	18.8
VIT_15s0046g02750.t01	Wine grape	cytosol	31.6	18.8
VIT_00s0448g00020.t01	Wine grape	cytosol	31.6	18.66
VIT_15s0046g02820.t01	Wine grape	cytosol	31.6	18.64
Bra040843.1-P	Field mustard	endoplasmic reticulum, extracellular	22.26	18.51
CDY65486	Canola	mitochondrion	30.16	18.22
AT1G58807.1	Thale cress	cytosol, extracellular, nucleus	33.03	18.09
AT1G59124.2	Thale cress	cytosol, extracellular, nucleus	33.03	18.09
VIT_15s0045g00980.t01	Wine grape	cytosol	19.21	17.92
CDX75047	Canola	cytosol	22.26	17.92
CDX75041	Canola	cytosol	24.6	17.75
CDY15085	Canola	extracellular, golgi	29.8	17.72
VIT_15s0046g02810.t01	Wine grape	cytosol	29.62	17.61
CDY30895	Canola	cytosol	21.9	17.58
TraesCS2D01G510300.1	Wheat	cytosol	17.24	17.55
AT1G58848.1	Thale cress	nucleus	33.03	17.54
AT1G59218.2	Thale cress	nucleus	33.03	17.54
Bra013213.1-P	Field mustard	cytosol	30.52	17.51
VIT_15s0046g02800.t01	Wine grape	cytosol	21.54	17.49
CDX75044	Canola	cytosol	18.13	17.18
CDX84131	Canola	cytosol	23.16	17.09
TraesCS6B01G447900.1	Wheat	cytosol	22.26	16.92
CDX89618	Canola	cytosol	28.73	16.86
Bra018448.1-P	Field mustard	cytosol	29.26	16.8
TraesCS2B01G151600.2	Wheat	cytosol	25.31	16.65
TraesCS1D01G324700.2	Wheat	cytosol	25.67	16.44
TraesCS7B01G501000.1	Wheat	cytosol	25.67	16.36
TraesCS7A01G561700.1	Wheat	cytosol	25.49	16.36
Bra040841.1-P	Field mustard	cytosol	23.52	16.25
TraesCS2D01G510000.1	Wheat	cytosol	22.44	16.23
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	22.98	16.18
TraesCS7B01G423500.1	Wheat	cytosol	25.13	16.17
TraesCS7A01G562000.1	Wheat	cytosol	25.31	16.11
TraesCS1A01G323600.1	Wheat	cytosol	25.13	16.07
TraesCS6D01G387500.1	Wheat	cytosol, plastid	22.8	16.06
TraesCS7B01G500700.1	Wheat	cytosol	24.42	16.02
AT1G58602.2	Thale cress	cytosol	32.67	15.99
CDY45150	Canola	endoplasmic reticulum	27.65	15.98
TraesCS7D01G548100.1	Wheat	cytosol	25.49	15.97
HORVU2Hr1G022620.8	Barley	cytosol	24.96	15.96
HORVU1Hr1G075170.1	Barley	cytosol	24.6	15.75
TraesCS7B01G501100.1	Wheat	cytosol	24.6	15.73
TraesCS7A01G561900.4	Wheat	cytosol	25.85	15.69
TraesCS7B01G501900.1	Wheat	cytosol	24.42	15.61
CDY05434	Canola	cytosol	31.06	15.57
TraesCS2D01G481300.1	Wheat	cytosol	26.75	15.57
TraesCS7B01G500900.1	Wheat	cytosol	24.42	15.54
Bra005271.1-P	Field mustard	cytosol	32.14	15.54
VIT_03s0038g01670.t01	Wine grape	cytosol	16.52	15.51
TraesCS2B01G507100.1	Wheat	cytosol	26.39	15.49
TraesCS6B01G448100.1	Wheat	cytosol	21.72	15.36
Os10t0183000-01	Rice	plasma membrane	24.6	15.32
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	20.83	15.32
Bra029405.1-P	Field mustard	endoplasmic reticulum, extracellular	31.6	15.15
TraesCS1B01G336700.1	Wheat	cytosol	21.72	15.09
OQU82378	Sorghum	nucleus	22.62	15.04
TraesCS7B01G449900.2	Wheat	cytosol	23.88	15.03
Os03t0709200-01	Rice	cytosol	25.67	14.91
VIT_15s0045g00680.t01	Wine grape	cytosol	20.65	14.88
TraesCS5A01G261700.1	Wheat	cytosol	23.34	14.76
TraesCS2A01G459100.1	Wheat	plastid	20.83	14.59
HORVU5Hr1G072540.26	Barley	cytosol	22.8	14.45
TraesCS5B01G259900.1	Wheat	cytosol	23.7	14.21
TraesCS5A01G261600.1	Wheat	cytosol	22.44	14.19
VIT_15s0045g00880.t01	Wine grape	cytosol	19.21	14.17
Zm00001d045512_P001	Maize	cytosol, mitochondrion	21.18	14.17
CDY05425	Canola	cytosol	13.11	14.09
TraesCS2A01G477200.1	Wheat	cytosol	17.06	14.05
TraesCS6B01G448400.1	Wheat	cytosol	21.36	14.03
CDY05424	Canola	cytosol	12.57	13.81
VIT_03s0038g01610.t01	Wine grape	cytosol	11.85	13.15
VIT_15s0045g00640.t01	Wine grape	cytosol	11.13	12.84
CDY60887	Canola	cytosol	31.6	12.63
TraesCS7B01G500800.1	Wheat	cytosol	16.34	12.62
TraesCS5D01G269100.1	Wheat	cytosol	15.26	12.34
CDX85375	Canola	cytosol	14.18	11.9
Bra037448.1-P	Field mustard	cytosol	18.13	11.87
VIT_15s0045g00810.t01	Wine grape	cytosol	8.62	11.27
Os11t0633500-01	Rice	cytosol	10.59	11.17
TraesCS7A01G562500.1	Wheat	cytosol	11.13	11.17
TraesCS2B01G536900.1	Wheat	cytosol	10.59	10.67
TraesCS6B01G447800.1	Wheat	cytosol	9.69	10.15
VIT_15s0045g00920.t01	Wine grape	cytosol	9.34	10.0
TraesCS2D01G510100.1	Wheat	cytosol	7.9	9.03
CDY30905	Canola	cytosol	7.18	8.97
CDX75042	Canola	plastid	15.44	8.81
VIT_03s0038g01530.t01	Wine grape	cytosol	17.24	8.53
VIT_03s0038g01540.t01	Wine grape	cytosol	4.31	5.81
VIT_09s0096g00930.t01	Wine grape	cytosol, endoplasmic reticulum	1.8	4.2
CDY38710	Canola	cytosol, mitochondrion	1.8	2.65
VIT_13s0067g00750.t01	Wine grape	cytosol	1.8	2.65
CDY27293	Canola	cytosol, mitochondrion	0.9	1.69
Bra037453.1-P	Field mustard	nucleus	3.05	1.57
CDX86272	Canola	cytosol	0.18	0.33
Bra005277.1-P	Field mustard	cytosol	0.18	0.29
Bra040891.1-P	Field mustard	cytosol	0.18	0.29
CDX86270	Canola	cytosol	0.18	0.28
TraesCS2A01G129300.1	Wheat	cytosol	0.0	0.0
TraesCS6B01G448000.1	Wheat	cytosol	0.0	0.0
TraesCS7B01G501300.1	Wheat	cytosol	0.0	0.0
VIT_15s0021g00130.t01	Wine grape	cytosol, nucleus, plastid	0.0	0.0
VIT_15s0045g01010.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

EntrezGene:100260499	wikigene:100260499	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:CCB49871	ProteinID:CCB49871.1
UniProt:F6HCD6	EMBL:FN595514	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531	InterPro:IPR032675	EntrezGene:LOC100260499
wikigene:LOC100260499	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364
PANTHER:PTHR43886	PANTHER:PTHR43886:SF8	SUPFAM:SSF52058	SUPFAM:SSF52540	SignalP:SignalP-noTM	UniParc:UPI0002108457
ArrayExpress:VIT_13s0067g00740	EnsemblPlantsGene:VIT_13s0067g00740	EnsemblPlants:VIT_13s0067g00740.t01	RefSeq:XP_002271551	RefSeq:XP_002271551.2	SEG:seg

Description

No Description!

Coordinates

chr13:-:408641..410725

Molecular Weight (calculated)

63661.3 Da

IEP (calculated)

6.966

GRAVY (calculated)

-0.168

Length

557 amino acids

Sequence
(BLAST)

001: MAKYCGGLPL AVVVLGGLLA TKHHTYEWER IHKHTKSYLR SGKDKCEQQG SGVSNVLALS YQDLPYQLKS CFLYLGHFPE DHEIHKKALV RMWVAEGIVS
101: RVGEETSEDV AEGYLDELIG RCMVQVGRRD SNGRVQTCRL HDLMRDLCLS KAEEENFLEI VNLQQMETFS SSMPTTRTSN KVRRRAIFLD RRRPSESIEE
201: ARLLSENGDE GANIYVNLIP QNGTYLRSLL TFDTQYSSII PKVLRNTDWK NFKLLRVLSL EELLLEENIP EALGNLIHLK YLSLKSASLP SFPSFIRNLG
301: CIQTLDLRFY SAADADQPIN CFGLNKVIGR MKCLRHLYLP MYLKVDDSKV QLGKLSNLET LKNFDGEHWE VQDLAQATME ETDLRQLSIC QHLYKLFLGG
401: EISKLPGHHH LPPNLTKLTL CGSYLRQDPI PILERLLNLT ALCLWSNFYL GEEIVFSANG FPRLTFLGLS FDYAIKLLWV DKSAMPSLKH LSIQRCTSLA
501: MVPEGLRYIT TLQILEIFNM PKEFIQRLQV INGIEGDDFY KVRHVPSILL IVEDESS

Best Arabidopsis Sequence Match ( AT1G53350.1 )
(BLAST)

001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH

Arabidopsis Description

RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.