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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY03593 Canola cytosol 86.35 85.45
CDY45054 Canola cytosol 82.5 84.67
Bra014241.1-P Field mustard cytosol 86.7 80.32
VIT_13s0067g00750.t01 Wine grape cytosol 18.09 41.11
AT5G43470.1 Thale cress cytosol 42.59 40.2
AT5G35450.1 Thale cress cytosol 42.12 40.07
AT1G53350.1 Thale cress cytosol 42.24 39.96
AT5G48620.1 Thale cress cytosol 42.24 39.87
VIT_09s0096g00930.t01 Wine grape cytosol, endoplasmic reticulum 10.62 38.24
AT1G59620.2 Thale cress cytosol 32.67 37.84
VIT_13s0067g00780.t01 Wine grape cytosol 32.91 37.6
AT1G58390.1 Thale cress cytosol 39.79 37.6
AT1G10920.4 Thale cress cytosol 31.86 37.55
AT1G58400.2 Thale cress cytosol 39.67 37.36
KRH37369 Soybean extracellular 33.14 36.6
AT1G58410.2 Thale cress cytosol 38.04 36.26
KRH01327 Soybean cytosol 38.86 36.23
AT1G59780.1 Thale cress cytosol 37.81 35.76
VIT_13s0067g00810.t01 Wine grape cytosol 38.39 35.61
VIT_03s0038g01400.t01 Wine grape cytosol 35.94 35.4
VIT_13s0067g00790.t01 Wine grape cytosol 38.74 34.91
KRH12365 Soybean endoplasmic reticulum 38.86 34.01
AT1G59124.2 Thale cress cytosol, extracellular, nucleus 40.14 33.83
AT1G58807.1 Thale cress cytosol, extracellular, nucleus 40.14 33.83
VIT_13s0067g00760.t01 Wine grape cytosol, plastid 30.57 33.16
KRH45065 Soybean cytosol 29.99 32.74
AT1G59218.2 Thale cress nucleus 40.02 32.7
AT1G58848.1 Thale cress nucleus 40.02 32.7
PGSC0003DMT400075439 Potato cytosol 35.24 31.59
Os11t0633500-01 Rice cytosol 19.37 31.44
TraesCS2D01G510100.1 Wheat cytosol 17.85 31.42
Solyc12g096920.1.1 Tomato extracellular 34.89 31.34
TraesCS7B01G501300.1 Wheat cytosol 10.04 31.16
TraesCS7A01G562500.1 Wheat cytosol 19.95 30.81
VIT_13s0067g00740.t01 Wine grape extracellular 19.72 30.34
GSMUA_Achr7P20240_001 Banana mitochondrion 24.5 30.04
TraesCS2B01G536900.1 Wheat cytosol 19.14 29.66
GSMUA_Achr7P20230_001 Banana cytosol 30.69 29.62
GSMUA_AchrUn_... Banana cytosol 9.45 29.56
AT1G58602.2 Thale cress cytosol 39.09 29.44
GSMUA_AchrUn_... Banana cytosol 25.67 29.33
TraesCS2A01G129300.1 Wheat cytosol 8.52 29.2
TraesCS6B01G448000.1 Wheat cytosol 9.22 29.15
TraesCS2A01G477200.1 Wheat cytosol 22.87 28.99
TraesCS6B01G447800.1 Wheat cytosol 17.97 28.95
GSMUA_Achr7P20220_001 Banana cytosol 30.22 28.81
TraesCS2D01G510000.1 Wheat cytosol 25.79 28.7
TraesCS7B01G500700.1 Wheat cytosol 28.12 28.39
AT3G46530.1 Thale cress nucleus 27.65 28.38
AT3G46730.1 Thale cress cytosol 28.0 28.34
TraesCS7B01G500800.1 Wheat cytosol 23.8 28.29
TraesCS2D01G510300.1 Wheat cytosol 17.62 27.61
TraesCS7B01G423500.1 Wheat cytosol 27.89 27.6
TraesCS6B01G448300.2 Wheat cytosol, peroxisome, plasma membrane 25.44 27.56
TraesCS7A01G562000.1 Wheat cytosol 28.0 27.43
AT3G46710.1 Thale cress cytosol 27.07 27.39
TraesCS1B01G336700.1 Wheat cytosol 25.55 27.31
TraesCS6B01G448100.1 Wheat cytosol 25.09 27.28
TraesCS1D01G324700.2 Wheat cytosol 27.54 27.13
TraesCS7B01G449900.2 Wheat cytosol 28.0 27.12
TraesCS6A01G403900.1 Wheat plasma membrane, vacuole 23.92 27.08
TraesCS7B01G501900.1 Wheat cytosol 27.42 26.98
TraesCS2B01G151600.2 Wheat cytosol 26.6 26.92
HORVU2Hr1G022620.8 Barley cytosol 27.3 26.87
TraesCS1A01G323600.1 Wheat cytosol 27.19 26.75
TraesCS7D01G548100.1 Wheat cytosol 27.65 26.66
TraesCS7B01G501100.1 Wheat cytosol 27.07 26.64
TraesCS7B01G500900.1 Wheat cytosol 27.19 26.63
PGSC0003DMT400019327 Potato cytosol, extracellular 14.94 26.61
OQU82378 Sorghum nucleus 26.02 26.61
HORVU1Hr1G075170.1 Barley cytosol 26.84 26.44
TraesCS2A01G459100.1 Wheat plastid 24.5 26.42
TraesCS7A01G561700.1 Wheat cytosol 26.6 26.27
TraesCS7B01G501000.1 Wheat cytosol 26.6 26.09
TraesCS7A01G561900.4 Wheat cytosol 27.77 25.93
TraesCS6D01G387500.1 Wheat cytosol, plastid 23.92 25.92
TraesCS6B01G447900.1 Wheat cytosol 21.94 25.65
TraesCS6B01G448400.1 Wheat cytosol 24.85 25.12
VIT_13s0067g00830.t01 Wine grape cytosol 39.21 24.42
TraesCS5D01G269100.1 Wheat cytosol 19.6 24.38
TraesCS2B01G507100.1 Wheat cytosol 26.95 24.34
TraesCS2D01G481300.1 Wheat cytosol 26.72 23.93
TraesCS7B01G501200.1 Wheat cytosol 15.17 23.64
Os10t0183000-01 Rice plasma membrane 24.62 23.6
PGSC0003DMT400031120 Potato cytosol 8.4 23.53
TraesCS5A01G261600.1 Wheat cytosol 24.15 23.5
TraesCS6D01G387400.1 Wheat cytosol 15.64 23.47
HORVU5Hr1G072540.26 Barley cytosol 24.04 23.44
TraesCS5A01G261700.1 Wheat cytosol 23.92 23.27
Os03t0709200-01 Rice cytosol 25.67 22.94
TraesCS6A01G404000.1 Wheat cytosol 14.35 22.49
TraesCS5B01G259900.1 Wheat cytosol 24.15 22.28
TraesCS2B01G507000.1 Wheat cytosol 18.79 22.02
Zm00001d045512_P001 Maize cytosol, mitochondrion 21.12 21.73
Protein Annotations
Gene3D:1.10.8.430Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1EntrezGene:841440ProteinID:AAD50046.1
ProteinID:AEE32522.1ArrayExpress:AT1G50180EnsemblPlantsGene:AT1G50180RefSeq:AT1G50180TAIR:AT1G50180RefSeq:AT1G50180-TAIR-G
EnsemblPlants:AT1G50180.1TAIR:AT1G50180.1Unigene:At.52109ncoils:CoilGO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006950
GO:GO:0006952GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009506GO:GO:0009987
GO:GO:0016020GO:GO:0043531InterPro:IPR032675InterPro:LRR_dom_sfInterPro:NB-ARCRefSeq:NP_175437.1
InterPro:P-loop_NTPasePFAM:PF00931PO:PO:0000293PO:PO:0009006PRINTS:PR00364PANTHER:PTHR43886
PANTHER:PTHR43886:SF8UniProt:Q9SX38InterPro:RX-like_CCSUPFAM:SSF52058SUPFAM:SSF52540UniParc:UPI00001630D5
SEG:seg:::::
Description
Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
Coordinates
chr1:+:18583964..18587136
Molecular Weight (calculated)
97280.3 Da
IEP (calculated)
6.582
GRAVY (calculated)
-0.173
Length
857 amino acids
Sequence
(BLAST)
001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.