Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G59620.2 | Thale cress | cytosol | 44.7 | 54.73 |
| AT1G58410.2 | Thale cress | cytosol | 53.53 | 53.95 |
| AT1G58400.2 | Thale cress | cytosol | 53.86 | 53.63 |
| AT1G58390.1 | Thale cress | cytosol | 53.53 | 53.47 |
| CDY28958 | Canola | cytosol | 50.11 | 51.53 |
| AT5G48620.1 | Thale cress | cytosol | 51.1 | 50.99 |
| AT5G43470.1 | Thale cress | cytosol | 50.0 | 49.89 |
| AT1G53350.1 | Thale cress | cytosol | 49.45 | 49.45 |
| AT5G35450.1 | Thale cress | cytosol | 49.12 | 49.39 |
| AT1G10920.4 | Thale cress | cytosol | 38.85 | 48.42 |
| AT1G59124.2 | Thale cress | cytosol, extracellular, nucleus | 51.88 | 46.21 |
| AT1G58807.1 | Thale cress | cytosol, extracellular, nucleus | 51.88 | 46.21 |
| AT1G59218.2 | Thale cress | nucleus | 52.98 | 45.76 |
| AT1G58848.1 | Thale cress | nucleus | 52.98 | 45.76 |
| AT1G58602.2 | Thale cress | cytosol | 53.31 | 42.44 |
| AT1G50180.1 | Thale cress | cytosol | 35.76 | 37.81 |
| VIT_13s0067g00810.t01 | Wine grape | cytosol | 35.54 | 34.85 |
| KRH01327 | Soybean | cytosol | 34.99 | 34.49 |
| VIT_03s0038g01400.t01 | Wine grape | cytosol | 32.56 | 33.91 |
| VIT_13s0067g00790.t01 | Wine grape | cytosol | 35.43 | 33.75 |
| VIT_13s0067g00740.t01 | Wine grape | extracellular | 20.75 | 33.75 |
| VIT_13s0067g00780.t01 | Wine grape | cytosol | 27.92 | 33.73 |
| VIT_13s0067g00750.t01 | Wine grape | cytosol | 13.91 | 33.42 |
| VIT_13s0067g00760.t01 | Wine grape | cytosol, plastid | 28.92 | 33.16 |
| KRH45065 | Soybean | cytosol | 28.04 | 32.36 |
| GSMUA_AchrUn_... | Banana | cytosol | 9.49 | 31.39 |
| KRH37369 | Soybean | extracellular | 26.71 | 31.19 |
| VIT_09s0096g00930.t01 | Wine grape | cytosol, endoplasmic reticulum | 8.17 | 31.09 |
| Solyc12g096920.1.1 | Tomato | extracellular | 32.34 | 30.71 |
| PGSC0003DMT400075439 | Potato | cytosol | 32.23 | 30.54 |
| KRH12365 | Soybean | endoplasmic reticulum | 32.56 | 30.13 |
| GSMUA_Achr7P20240_001 | Banana | mitochondrion | 22.85 | 29.61 |
| AT3G46730.1 | Thale cress | cytosol | 27.15 | 29.04 |
| PGSC0003DMT400031120 | Potato | cytosol | 9.71 | 28.76 |
| GSMUA_Achr7P20230_001 | Banana | cytosol | 27.7 | 28.27 |
| AT3G46530.1 | Thale cress | nucleus | 25.61 | 27.78 |
| GSMUA_Achr7P20220_001 | Banana | cytosol | 27.37 | 27.59 |
| TraesCS7B01G500700.1 | Wheat | cytosol | 25.83 | 27.56 |
| TraesCS2B01G151600.2 | Wheat | cytosol | 25.61 | 27.39 |
| AT3G46710.1 | Thale cress | cytosol | 25.5 | 27.27 |
| TraesCS2D01G510100.1 | Wheat | cytosol | 14.57 | 27.1 |
| TraesCS2D01G510000.1 | Wheat | cytosol | 22.96 | 27.01 |
| TraesCS6A01G403900.1 | Wheat | plasma membrane, vacuole | 22.3 | 26.68 |
| TraesCS7B01G423500.1 | Wheat | cytosol | 25.5 | 26.67 |
| GSMUA_AchrUn_... | Banana | cytosol | 22.08 | 26.67 |
| HORVU2Hr1G022620.8 | Barley | cytosol | 25.61 | 26.64 |
| Os11t0633500-01 | Rice | cytosol | 15.45 | 26.52 |
| TraesCS6B01G447900.1 | Wheat | cytosol | 21.3 | 26.33 |
| TraesCS2D01G510300.1 | Wheat | cytosol | 15.89 | 26.33 |
| TraesCS7A01G562500.1 | Wheat | cytosol | 16.11 | 26.31 |
| TraesCS7D01G548100.1 | Wheat | cytosol | 25.72 | 26.21 |
| TraesCS6B01G448000.1 | Wheat | cytosol | 7.84 | 26.2 |
| TraesCS7B01G501100.1 | Wheat | cytosol | 25.06 | 26.06 |
| TraesCS7A01G562000.1 | Wheat | cytosol | 25.17 | 26.06 |
| TraesCS7B01G501900.1 | Wheat | cytosol | 24.94 | 25.95 |
| TraesCS2A01G477200.1 | Wheat | cytosol | 19.21 | 25.74 |
| TraesCS1B01G336700.1 | Wheat | cytosol | 22.74 | 25.69 |
| TraesCS2B01G536900.1 | Wheat | cytosol | 15.67 | 25.68 |
| TraesCS7B01G501200.1 | Wheat | cytosol | 15.56 | 25.64 |
| TraesCS1D01G324700.2 | Wheat | cytosol | 24.61 | 25.63 |
| HORVU1Hr1G075170.1 | Barley | cytosol | 24.61 | 25.63 |
| TraesCS1A01G323600.1 | Wheat | cytosol | 24.61 | 25.6 |
| OQU82378 | Sorghum | nucleus | 23.62 | 25.54 |
| TraesCS7B01G501000.1 | Wheat | cytosol | 24.61 | 25.51 |
| TraesCS7B01G449900.2 | Wheat | cytosol | 24.83 | 25.42 |
| TraesCS6B01G448300.2 | Wheat | cytosol, peroxisome, plasma membrane | 22.19 | 25.41 |
| TraesCS7A01G561700.1 | Wheat | cytosol | 24.28 | 25.35 |
| TraesCS7B01G500900.1 | Wheat | cytosol | 24.39 | 25.26 |
| TraesCS6B01G448100.1 | Wheat | cytosol | 21.96 | 25.25 |
| TraesCS6D01G387500.1 | Wheat | cytosol, plastid | 21.96 | 25.16 |
| PGSC0003DMT400019327 | Potato | cytosol, extracellular | 13.36 | 25.16 |
| TraesCS7A01G561900.4 | Wheat | cytosol | 25.39 | 25.05 |
| TraesCS6D01G387400.1 | Wheat | cytosol | 15.67 | 24.87 |
| TraesCS7B01G500800.1 | Wheat | cytosol | 19.76 | 24.83 |
| TraesCS6B01G447800.1 | Wheat | cytosol | 14.57 | 24.81 |
| TraesCS2A01G129300.1 | Wheat | cytosol | 6.84 | 24.8 |
| TraesCS5A01G261700.1 | Wheat | cytosol | 23.84 | 24.52 |
| TraesCS2A01G459100.1 | Wheat | plastid | 21.41 | 24.4 |
| TraesCS2B01G507100.1 | Wheat | cytosol | 25.5 | 24.34 |
| TraesCS7B01G501300.1 | Wheat | cytosol | 7.4 | 24.28 |
| TraesCS5A01G261600.1 | Wheat | cytosol | 23.4 | 24.06 |
| TraesCS6B01G448400.1 | Wheat | cytosol | 22.52 | 24.06 |
| TraesCS2D01G481300.1 | Wheat | cytosol | 25.39 | 24.03 |
| HORVU5Hr1G072540.26 | Barley | cytosol | 23.29 | 24.0 |
| TraesCS6A01G404000.1 | Wheat | cytosol | 14.35 | 23.77 |
| TraesCS5D01G269100.1 | Wheat | cytosol | 17.88 | 23.51 |
| TraesCS2B01G507000.1 | Wheat | cytosol | 18.87 | 23.39 |
| Os10t0183000-01 | Rice | plasma membrane | 23.07 | 23.38 |
| VIT_13s0067g00830.t01 | Wine grape | cytosol | 35.21 | 23.18 |
| TraesCS5B01G259900.1 | Wheat | cytosol | 23.62 | 23.04 |
| Os03t0709200-01 | Rice | cytosol | 22.96 | 21.69 |
| Zm00001d045512_P001 | Maize | cytosol, mitochondrion | 19.43 | 21.13 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:842271 | ProteinID:AAD39321.1 | ProteinID:AEE33617.1 |
| ArrayExpress:AT1G59780 | EnsemblPlantsGene:AT1G59780 | RefSeq:AT1G59780 | TAIR:AT1G59780 | RefSeq:AT1G59780-TAIR-G | EnsemblPlants:AT1G59780.1 |
| TAIR:AT1G59780.1 | Unigene:At.52272 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043531 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | RefSeq:NP_176187.1 | InterPro:P-loop_NTPase | PFAM:PF00931 |
| PO:PO:0000191 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009046 | PO:PO:0020100 | PRINTS:PR00364 |
| PANTHER:PTHR43886 | PANTHER:PTHR43886:SF8 | UniProt:Q9XIF0 | InterPro:RX-like_CC | SUPFAM:SSF52058 | SUPFAM:SSF52540 |
| UniParc:UPI00000A26B0 | SEG:seg | : | : | : | : |
Description
Putative disease resistance protein At1g59780 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIF0]
Coordinates
chr1:-:21993581..21997691
Molecular Weight (calculated)
103636.0 Da
IEP (calculated)
7.405
GRAVY (calculated)
-0.209
Length
906 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDLYMVDSI VSFGVEKLWK LLSQEYERFQ GVEEQITELR DDLKMLMAFL SDADAKKQTR ALARNCLEEI KEITYDAEDI IEIFLLKGSV NMRSLACFPG
101: GRREIALQIT SISKRISKVI QVMQNLGIKS DIMDGVDSHA QLERKRELRH TFSSESESNL VGLEKNVEKL VEELVGNDSS HGVSITGLGG LGKTTLARQI
201: FDHDKVKSHF DGLAWVCVSQ EFTRKDVWKT ILGNLSPKYK DSDLPEDDIQ KKLFQLLETK KALIVFDDLW KREDWYRIAP MFPERKAGWK VLLTSRNDAI
301: HPHCVTFKPE LLTHDECWKL LQRIAFSKQK TITGYIIDKE MVKMAKEMTK HCKRLPLAVK LLGGLLDAKH TLRQWKLISE NIISHIVVGG TSSNENDSSS
401: VNHVLSLSFE GLPGYLKHCL LYLASYPEDH EIEIERLSYV WAAEGITYPG NYEGATIRDV ADLYIEELVK RNMVISERDA LTSRFEKCQL HDLMREICLL
501: KAKEENFLQI VTDPTSSSSV HSLASSRSRR LVVYNTSIFS GENDMKNSKL RSLLFIPVGY SRFSMGSNFI ELPLLRVLDL DGAKFKGGKL PSSIGKLIHL
601: KYLSLYQASV TYLPSSLRNL KSLLYLNLRI NSGQLINVPN VFKEMLELRY LSLPWERSSL TKLELGNLLK LETLINFSTK DSSVTDLHRM TKLRTLQILI
701: SGEGLHMETL SSALSMLGHL EDLTVTPSEN SVQFKHPKLI YRPMLPDVQH FPSHLTTISL VYCFLEEDPM PTLEKLLQLK VVSLWYNAYV GRRMVCTGGG
801: FPPLHRLEIW GLDALEEWIV EEGSMPLLHT LHIVDCKKLK EIPDGLRFIS SLKELAIRTN EKVFQKKVSK GGEDYYKMQH VPLIRYNWPQ EPENNEVIYS
901: FPSPII
101: GRREIALQIT SISKRISKVI QVMQNLGIKS DIMDGVDSHA QLERKRELRH TFSSESESNL VGLEKNVEKL VEELVGNDSS HGVSITGLGG LGKTTLARQI
201: FDHDKVKSHF DGLAWVCVSQ EFTRKDVWKT ILGNLSPKYK DSDLPEDDIQ KKLFQLLETK KALIVFDDLW KREDWYRIAP MFPERKAGWK VLLTSRNDAI
301: HPHCVTFKPE LLTHDECWKL LQRIAFSKQK TITGYIIDKE MVKMAKEMTK HCKRLPLAVK LLGGLLDAKH TLRQWKLISE NIISHIVVGG TSSNENDSSS
401: VNHVLSLSFE GLPGYLKHCL LYLASYPEDH EIEIERLSYV WAAEGITYPG NYEGATIRDV ADLYIEELVK RNMVISERDA LTSRFEKCQL HDLMREICLL
501: KAKEENFLQI VTDPTSSSSV HSLASSRSRR LVVYNTSIFS GENDMKNSKL RSLLFIPVGY SRFSMGSNFI ELPLLRVLDL DGAKFKGGKL PSSIGKLIHL
601: KYLSLYQASV TYLPSSLRNL KSLLYLNLRI NSGQLINVPN VFKEMLELRY LSLPWERSSL TKLELGNLLK LETLINFSTK DSSVTDLHRM TKLRTLQILI
701: SGEGLHMETL SSALSMLGHL EDLTVTPSEN SVQFKHPKLI YRPMLPDVQH FPSHLTTISL VYCFLEEDPM PTLEKLLQLK VVSLWYNAYV GRRMVCTGGG
801: FPPLHRLEIW GLDALEEWIV EEGSMPLLHT LHIVDCKKLK EIPDGLRFIS SLKELAIRTN EKVFQKKVSK GGEDYYKMQH VPLIRYNWPQ EPENNEVIYS
901: FPSPII
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.