Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 2
- cytosol 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G58807.1 | Thale cress | cytosol, extracellular, nucleus | 100.0 | 100.0 |
| AT1G58848.1 | Thale cress | nucleus | 87.71 | 85.03 |
| AT1G59218.2 | Thale cress | nucleus | 87.71 | 85.03 |
| AT1G58602.2 | Thale cress | cytosol | 79.65 | 71.18 |
| AT1G58390.1 | Thale cress | cytosol | 61.06 | 68.47 |
| AT1G58410.2 | Thale cress | cytosol | 58.01 | 65.63 |
| AT1G58400.2 | Thale cress | cytosol | 58.6 | 65.49 |
| CDY48845 | Canola | nucleus | 52.51 | 59.47 |
| Bra027866.1-P | Field mustard | cytosol | 52.31 | 57.27 |
| CDY66341 | Canola | nucleus | 42.77 | 56.79 |
| AT1G59620.2 | Thale cress | cytosol | 40.61 | 55.81 |
| AT1G59780.1 | Thale cress | cytosol | 46.21 | 51.88 |
| AT1G53350.1 | Thale cress | cytosol | 45.92 | 51.55 |
| AT5G48620.1 | Thale cress | cytosol | 45.13 | 50.55 |
| AT5G43470.1 | Thale cress | cytosol | 45.13 | 50.55 |
| AT5G35450.1 | Thale cress | cytosol | 44.25 | 49.94 |
| AT1G10920.4 | Thale cress | cytosol | 34.81 | 48.69 |
| AT1G50180.1 | Thale cress | cytosol | 33.83 | 40.14 |
| VIT_13s0067g00780.t01 | Wine grape | cytosol | 26.06 | 35.33 |
| VIT_13s0067g00810.t01 | Wine grape | cytosol | 31.76 | 34.96 |
| KRH01327 | Soybean | cytosol | 31.37 | 34.71 |
| VIT_13s0067g00750.t01 | Wine grape | cytosol | 12.78 | 34.48 |
| VIT_03s0038g01400.t01 | Wine grape | cytosol | 29.01 | 33.91 |
| KRH37369 | Soybean | extracellular | 25.76 | 33.76 |
| VIT_13s0067g00790.t01 | Wine grape | cytosol | 31.56 | 33.75 |
| VIT_13s0067g00760.t01 | Wine grape | cytosol, plastid | 25.86 | 33.29 |
| VIT_13s0067g00740.t01 | Wine grape | extracellular | 18.09 | 33.03 |
| PGSC0003DMT400075439 | Potato | cytosol | 30.78 | 32.74 |
| Solyc12g096920.1.1 | Tomato | extracellular | 30.68 | 32.7 |
| KRH12365 | Soybean | endoplasmic reticulum | 31.17 | 32.38 |
| KRH45065 | Soybean | cytosol | 24.78 | 32.1 |
| GSMUA_Achr7P20240_001 | Banana | mitochondrion | 20.94 | 30.47 |
| TraesCS2D01G510100.1 | Wheat | cytosol | 14.55 | 30.39 |
| GSMUA_AchrUn_... | Banana | cytosol | 8.16 | 30.29 |
| AT3G46730.1 | Thale cress | cytosol | 24.88 | 29.87 |
| TraesCS2D01G510000.1 | Wheat | cytosol | 22.62 | 29.87 |
| HORVU2Hr1G022620.8 | Barley | cytosol | 25.47 | 29.74 |
| TraesCS2B01G151600.2 | Wheat | cytosol | 24.68 | 29.63 |
| TraesCS7B01G501900.1 | Wheat | cytosol | 25.37 | 29.62 |
| TraesCS2D01G510300.1 | Wheat | cytosol | 15.93 | 29.62 |
| TraesCS7A01G562500.1 | Wheat | cytosol | 16.13 | 29.55 |
| Os11t0633500-01 | Rice | cytosol | 15.34 | 29.55 |
| TraesCS7B01G501100.1 | Wheat | cytosol | 25.27 | 29.51 |
| TraesCS7A01G562000.1 | Wheat | cytosol | 25.37 | 29.49 |
| GSMUA_Achr7P20230_001 | Banana | cytosol | 25.37 | 29.05 |
| TraesCS2A01G477200.1 | Wheat | cytosol | 19.27 | 28.99 |
| VIT_09s0096g00930.t01 | Wine grape | cytosol, endoplasmic reticulum | 6.78 | 28.99 |
| TraesCS6B01G447800.1 | Wheat | cytosol | 15.14 | 28.95 |
| TraesCS6A01G403900.1 | Wheat | plasma membrane, vacuole | 21.53 | 28.93 |
| TraesCS7B01G500900.1 | Wheat | cytosol | 24.78 | 28.8 |
| AT3G46530.1 | Thale cress | nucleus | 23.6 | 28.74 |
| GSMUA_AchrUn_... | Banana | cytosol | 21.14 | 28.67 |
| GSMUA_Achr7P20220_001 | Banana | cytosol | 25.27 | 28.59 |
| TraesCS6B01G448100.1 | Wheat | cytosol | 22.12 | 28.55 |
| TraesCS6D01G387400.1 | Wheat | cytosol | 16.03 | 28.55 |
| TraesCS7B01G501200.1 | Wheat | cytosol | 15.44 | 28.55 |
| TraesCS6B01G448300.2 | Wheat | cytosol, peroxisome, plasma membrane | 22.12 | 28.45 |
| TraesCS7B01G423500.1 | Wheat | cytosol | 24.09 | 28.29 |
| TraesCS2B01G536900.1 | Wheat | cytosol | 15.34 | 28.21 |
| TraesCS7D01G548100.1 | Wheat | cytosol | 24.58 | 28.12 |
| PGSC0003DMT400031120 | Potato | cytosol | 8.46 | 28.1 |
| TraesCS6B01G448000.1 | Wheat | cytosol | 7.47 | 28.04 |
| TraesCS7B01G501000.1 | Wheat | cytosol | 23.99 | 27.92 |
| AT3G46710.1 | Thale cress | cytosol | 23.11 | 27.75 |
| TraesCS6B01G447900.1 | Wheat | cytosol | 19.96 | 27.69 |
| TraesCS6D01G387500.1 | Wheat | cytosol, plastid | 21.53 | 27.69 |
| TraesCS7B01G449900.2 | Wheat | cytosol | 23.99 | 27.57 |
| TraesCS7A01G561700.1 | Wheat | cytosol | 23.5 | 27.53 |
| TraesCS1D01G324700.2 | Wheat | cytosol | 23.5 | 27.47 |
| OQU82378 | Sorghum | nucleus | 22.52 | 27.33 |
| TraesCS1B01G336700.1 | Wheat | cytosol | 21.53 | 27.31 |
| TraesCS1A01G323600.1 | Wheat | cytosol | 23.21 | 27.1 |
| TraesCS6A01G404000.1 | Wheat | cytosol | 14.55 | 27.06 |
| HORVU1Hr1G075170.1 | Barley | cytosol | 23.11 | 27.01 |
| TraesCS7B01G500700.1 | Wheat | cytosol | 22.52 | 26.97 |
| TraesCS7A01G561900.4 | Wheat | cytosol | 24.19 | 26.8 |
| TraesCS7B01G500800.1 | Wheat | cytosol | 18.88 | 26.63 |
| TraesCS6B01G448400.1 | Wheat | cytosol | 22.12 | 26.53 |
| TraesCS2A01G129300.1 | Wheat | cytosol | 6.39 | 26.0 |
| TraesCS2A01G459100.1 | Wheat | plastid | 20.26 | 25.91 |
| TraesCS7B01G501300.1 | Wheat | cytosol | 6.88 | 25.36 |
| HORVU5Hr1G072540.26 | Barley | cytosol | 21.63 | 25.03 |
| TraesCS5A01G261700.1 | Wheat | cytosol | 21.63 | 24.97 |
| PGSC0003DMT400019327 | Potato | cytosol, extracellular | 11.7 | 24.74 |
| TraesCS5D01G269100.1 | Wheat | cytosol | 16.72 | 24.67 |
| Os10t0183000-01 | Rice | plasma membrane | 21.53 | 24.5 |
| TraesCS2B01G507000.1 | Wheat | cytosol | 17.6 | 24.49 |
| TraesCS5A01G261600.1 | Wheat | cytosol | 21.14 | 24.4 |
| VIT_13s0067g00830.t01 | Wine grape | cytosol | 31.96 | 23.62 |
| TraesCS2B01G507100.1 | Wheat | cytosol | 22.03 | 23.6 |
| TraesCS2D01G481300.1 | Wheat | cytosol | 22.12 | 23.51 |
| TraesCS5B01G259900.1 | Wheat | cytosol | 21.44 | 23.47 |
| Zm00001d045512_P001 | Maize | cytosol, mitochondrion | 19.17 | 23.41 |
| Os03t0709200-01 | Rice | cytosol | 20.75 | 22.0 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:842225 | EntrezGene:842232 | ProteinID:AAK62797.1 |
| EMBL:AB028203 | EMBL:AB028222 | ProteinID:AEE33562.1 | ProteinID:AEE33563.1 | ProteinID:AEE33570.1 | ProteinID:ANM60642.1 |
| ArrayExpress:AT1G59124 | EnsemblPlantsGene:AT1G59124 | RefSeq:AT1G59124 | TAIR:AT1G59124 | RefSeq:AT1G59124-TAIR-G | EnsemblPlants:AT1G59124.2 |
| Unigene:At.22095 | Unigene:At.70366 | ProteinID:BAB84013.1 | ProteinID:BAB84017.1 | ncoils:Coil | UniProt:F4IBE4 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC |
| RefSeq:NP_001117515.1 | RefSeq:NP_001322914.1 | RefSeq:NP_176151.2 | RefSeq:NP_683446.1 | InterPro:P-loop_NTPase | UniProt:P0DI16 |
| PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43886 | PANTHER:PTHR43886:SF8 | InterPro:RX-like_CC | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | UniParc:UPI0000163185 | SEG:seg | : | : | : |
Description
RDL5Probable disease resistance protein RF45 [Source:UniProtKB/Swiss-Prot;Acc:F4IBE4]
Coordinates
chr1:+:21816334..21820839
Molecular Weight (calculated)
117054.0 Da
IEP (calculated)
6.584
GRAVY (calculated)
-0.276
Length
1017 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNM LSSFLKDANA KKHTSAVVKN CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRQKFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN NVLSLSFEEL PSYLKHCFLY LAHFPEDYEI KVENLSYYWA AEGIFQPRHY DGETIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRPSTANLQS TVTSRRFVYQ YPTTLHVEKD INNPKLRALV VVTLGSWNLA GSSFTRLELL RVLDLIEVKI KGGKLASCIG
0601: KLIHLRYLSL EYAEVTHIPY SLGNLKLLIY LNLASFGRST FVPNVLMGMQ ELRYLALPSD MGRKTKLELS NLVKLETLEN FSTENSSLED LCGMVRLSTL
0701: NIKLIEETSL ETLAASIGGL KYLEKLEIYD HGSEMRTKEA GIVFDFVHLK RLWLKLYMPR LSTEQHFPSH LTTLYLESCR LEEDPMPILE KLLQLKELEL
0801: GFESFSGKKM VCSSGGFPQL QRLSLLKLEE WEDWKVEESS MPLLRTLDIQ VCRKLKQLPD EHLPSHLTSI SLFFCCLEKD PLPTLGRLVY LKELQLGFRT
0901: FSGRIMVCSG GGFPQLQKLS IYRLEEWEEW IVEQGSMPFL HTLYIDDCPK LKKLPDGLQF IYSLKNLKIS ERWKERLSEG GEEYYKVQHI PSVEFYHRVL
1001: HIFRSVGGDI TGRLLMR
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRQKFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN NVLSLSFEEL PSYLKHCFLY LAHFPEDYEI KVENLSYYWA AEGIFQPRHY DGETIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRPSTANLQS TVTSRRFVYQ YPTTLHVEKD INNPKLRALV VVTLGSWNLA GSSFTRLELL RVLDLIEVKI KGGKLASCIG
0601: KLIHLRYLSL EYAEVTHIPY SLGNLKLLIY LNLASFGRST FVPNVLMGMQ ELRYLALPSD MGRKTKLELS NLVKLETLEN FSTENSSLED LCGMVRLSTL
0701: NIKLIEETSL ETLAASIGGL KYLEKLEIYD HGSEMRTKEA GIVFDFVHLK RLWLKLYMPR LSTEQHFPSH LTTLYLESCR LEEDPMPILE KLLQLKELEL
0801: GFESFSGKKM VCSSGGFPQL QRLSLLKLEE WEDWKVEESS MPLLRTLDIQ VCRKLKQLPD EHLPSHLTSI SLFFCCLEKD PLPTLGRLVY LKELQLGFRT
0901: FSGRIMVCSG GGFPQLQKLS IYRLEEWEEW IVEQGSMPFL HTLYIDDCPK LKKLPDGLQF IYSLKNLKIS ERWKERLSEG GEEYYKVQHI PSVEFYHRVL
1001: HIFRSVGGDI TGRLLMR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.