Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G58400.2 | Thale cress | cytosol | 68.85 | 68.02 |
| AT1G58390.1 | Thale cress | cytosol | 66.85 | 66.26 |
| AT1G58807.1 | Thale cress | cytosol, extracellular, nucleus | 65.63 | 58.01 |
| AT1G59124.2 | Thale cress | cytosol, extracellular, nucleus | 65.63 | 58.01 |
| AT1G58848.1 | Thale cress | nucleus | 64.63 | 55.39 |
| AT1G59218.2 | Thale cress | nucleus | 64.63 | 55.39 |
| AT1G59620.2 | Thale cress | cytosol | 44.94 | 54.59 |
| AT1G59780.1 | Thale cress | cytosol | 53.95 | 53.53 |
| AT1G53350.1 | Thale cress | cytosol | 52.95 | 52.54 |
| AT1G58602.2 | Thale cress | cytosol | 66.41 | 52.46 |
| AT5G48620.1 | Thale cress | cytosol | 52.61 | 52.09 |
| AT5G43470.1 | Thale cress | cytosol | 52.5 | 51.98 |
| AT1G10920.4 | Thale cress | cytosol | 41.27 | 51.03 |
| AT5G35450.1 | Thale cress | cytosol | 51.06 | 50.94 |
| AT1G50180.1 | Thale cress | cytosol | 36.26 | 38.04 |
| VIT_13s0067g00750.t01 | Wine grape | cytosol | 15.13 | 36.07 |
| VIT_13s0067g00780.t01 | Wine grape | cytosol | 29.7 | 35.6 |
| VIT_13s0067g00810.t01 | Wine grape | cytosol | 36.15 | 35.17 |
| VIT_13s0067g00790.t01 | Wine grape | cytosol | 36.93 | 34.91 |
| VIT_13s0067g00740.t01 | Wine grape | extracellular | 21.58 | 34.83 |
| VIT_03s0038g01400.t01 | Wine grape | cytosol | 33.59 | 34.71 |
| KRH01327 | Soybean | cytosol | 35.37 | 34.6 |
| VIT_13s0067g00760.t01 | Wine grape | cytosol, plastid | 30.14 | 34.3 |
| KRH37369 | Soybean | extracellular | 27.81 | 32.22 |
| VIT_09s0096g00930.t01 | Wine grape | cytosol, endoplasmic reticulum | 8.45 | 31.93 |
| GSMUA_AchrUn_... | Banana | cytosol | 9.68 | 31.75 |
| PGSC0003DMT400075439 | Potato | cytosol | 33.7 | 31.69 |
| KRH45065 | Soybean | cytosol | 27.59 | 31.59 |
| KRH12365 | Soybean | endoplasmic reticulum | 34.37 | 31.56 |
| Solyc12g096920.1.1 | Tomato | extracellular | 33.37 | 31.45 |
| AT3G46730.1 | Thale cress | cytosol | 28.59 | 30.34 |
| TraesCS2D01G510100.1 | Wheat | cytosol | 16.35 | 30.18 |
| TraesCS2D01G510000.1 | Wheat | cytosol | 25.58 | 29.87 |
| TraesCS2D01G510300.1 | Wheat | cytosol | 18.02 | 29.62 |
| GSMUA_Achr7P20240_001 | Banana | mitochondrion | 22.91 | 29.47 |
| AT3G46530.1 | Thale cress | nucleus | 27.03 | 29.1 |
| TraesCS2B01G536900.1 | Wheat | cytosol | 17.8 | 28.93 |
| TraesCS6A01G403900.1 | Wheat | plasma membrane, vacuole | 24.25 | 28.8 |
| TraesCS2B01G151600.2 | Wheat | cytosol | 27.03 | 28.69 |
| TraesCS7B01G423500.1 | Wheat | cytosol | 27.36 | 28.41 |
| GSMUA_Achr7P20230_001 | Banana | cytosol | 28.03 | 28.38 |
| TraesCS7B01G501900.1 | Wheat | cytosol | 27.48 | 28.36 |
| AT3G46710.1 | Thale cress | cytosol | 26.7 | 28.34 |
| TraesCS7A01G562500.1 | Wheat | cytosol | 17.46 | 28.29 |
| GSMUA_AchrUn_... | Banana | cytosol | 23.58 | 28.27 |
| GSMUA_Achr7P20220_001 | Banana | cytosol | 28.25 | 28.25 |
| Os11t0633500-01 | Rice | cytosol | 16.57 | 28.22 |
| HORVU2Hr1G022620.8 | Barley | cytosol | 27.25 | 28.13 |
| TraesCS7B01G501100.1 | Wheat | cytosol | 27.25 | 28.13 |
| TraesCS7A01G562000.1 | Wheat | cytosol | 27.25 | 28.0 |
| TraesCS7B01G500900.1 | Wheat | cytosol | 27.25 | 28.0 |
| TraesCS1D01G324700.2 | Wheat | cytosol | 26.92 | 27.82 |
| TraesCS1B01G336700.1 | Wheat | cytosol | 24.81 | 27.81 |
| TraesCS6B01G448100.1 | Wheat | cytosol | 24.36 | 27.79 |
| TraesCS2A01G477200.1 | Wheat | cytosol | 20.8 | 27.66 |
| TraesCS7A01G561700.1 | Wheat | cytosol | 26.7 | 27.65 |
| HORVU1Hr1G075170.1 | Barley | cytosol | 26.59 | 27.47 |
| TraesCS7D01G548100.1 | Wheat | cytosol | 27.14 | 27.45 |
| TraesCS1A01G323600.1 | Wheat | cytosol | 26.59 | 27.44 |
| TraesCS6B01G447900.1 | Wheat | cytosol | 22.25 | 27.29 |
| TraesCS6B01G447800.1 | Wheat | cytosol | 16.13 | 27.26 |
| TraesCS7B01G501000.1 | Wheat | cytosol | 26.47 | 27.23 |
| OQU82378 | Sorghum | nucleus | 25.36 | 27.21 |
| TraesCS7B01G501200.1 | Wheat | cytosol | 16.57 | 27.09 |
| TraesCS6D01G387400.1 | Wheat | cytosol | 17.13 | 26.97 |
| TraesCS6B01G448300.2 | Wheat | cytosol, peroxisome, plasma membrane | 23.69 | 26.93 |
| TraesCS7B01G449900.2 | Wheat | cytosol | 26.25 | 26.67 |
| TraesCS7B01G500700.1 | Wheat | cytosol | 25.14 | 26.62 |
| TraesCS2A01G459100.1 | Wheat | plastid | 23.36 | 26.42 |
| PGSC0003DMT400019327 | Potato | cytosol, extracellular | 14.13 | 26.4 |
| TraesCS2B01G507000.1 | Wheat | cytosol | 21.47 | 26.4 |
| TraesCS6D01G387500.1 | Wheat | cytosol, plastid | 23.14 | 26.3 |
| TraesCS7A01G561900.4 | Wheat | cytosol | 26.81 | 26.25 |
| TraesCS6A01G404000.1 | Wheat | cytosol | 15.91 | 26.14 |
| TraesCS7B01G500800.1 | Wheat | cytosol | 20.8 | 25.94 |
| PGSC0003DMT400031120 | Potato | cytosol | 8.79 | 25.82 |
| TraesCS6B01G448400.1 | Wheat | cytosol | 23.92 | 25.35 |
| TraesCS2B01G507100.1 | Wheat | cytosol | 26.59 | 25.18 |
| TraesCS6B01G448000.1 | Wheat | cytosol | 7.56 | 25.09 |
| TraesCS2D01G481300.1 | Wheat | cytosol | 26.59 | 24.97 |
| TraesCS5A01G261700.1 | Wheat | cytosol | 24.47 | 24.97 |
| TraesCS7B01G501300.1 | Wheat | cytosol | 7.56 | 24.64 |
| HORVU5Hr1G072540.26 | Barley | cytosol | 24.03 | 24.57 |
| TraesCS5D01G269100.1 | Wheat | cytosol | 18.8 | 24.53 |
| Os10t0183000-01 | Rice | plasma membrane | 24.36 | 24.5 |
| VIT_13s0067g00830.t01 | Wine grape | cytosol | 37.37 | 24.42 |
| TraesCS5A01G261600.1 | Wheat | cytosol | 23.69 | 24.18 |
| TraesCS2A01G129300.1 | Wheat | cytosol | 6.67 | 24.0 |
| TraesCS5B01G259900.1 | Wheat | cytosol | 24.25 | 23.47 |
| Os03t0709200-01 | Rice | cytosol | 24.14 | 22.63 |
| Zm00001d045512_P001 | Maize | cytosol, mitochondrion | 20.24 | 21.85 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:842210 | ProteinID:AAG50648.1 | EMBL:AB008019 |
| ProteinID:AEE33546.1 | ProteinID:ANM61068.1 | ProteinID:ANM61069.1 | ArrayExpress:AT1G58410 | EnsemblPlantsGene:AT1G58410 | RefSeq:AT1G58410 |
| TAIR:AT1G58410 | RefSeq:AT1G58410-TAIR-G | EnsemblPlants:AT1G58410.2 | Unigene:At.17241 | ProteinID:BAB83873.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | RefSeq:NP_001319267.1 |
| RefSeq:NP_001323309.1 | RefSeq:NP_176137.1 | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43886 |
| PANTHER:PTHR43886:SF8 | UniProt:Q9C646 | InterPro:RX-like_CC | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI00000A1C86 |
| SEG:seg | : | : | : | : | : |
Description
RXW24LProbable disease resistance protein RXW24L [Source:UniProtKB/Swiss-Prot;Acc:Q9C646]
Coordinates
chr1:-:21701185..21704982
Molecular Weight (calculated)
104339.0 Da
IEP (calculated)
7.070
GRAVY (calculated)
-0.345
Length
899 amino acids
Sequence
(BLAST)
(BLAST)
001: MELVSFGVEK LWDRLSQEYD QFKGVEDQVT ELKSNLNLLK SFLKDADAKK HISEMVRHCV EEIKDIVYDT EDIIETFILK EKVEMKRGIM KRIKRFASTI
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.