Factsheet for Solyc12g096920.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075439	Potato	cytosol	96.33	96.13
CDY38707	Canola	cytosol, extracellular	1.57	55.56
Solyc12g010660.1.1	Tomato	cytosol	10.69	40.96
KRH01327	Soybean	cytosol	38.89	40.37
CDY45137	Canola	cytosol	6.08	39.19
KRH37369	Soybean	extracellular	30.92	38.02
Solyc12g006040.1.1	Tomato	cytosol	12.05	37.58
KRH45065	Soybean	cytosol	30.29	36.82
KRH12365	Soybean	endoplasmic reticulum	37.32	36.36
CDX86269	Canola	cytosol	23.69	36.33
AT1G10920.4	Thale cress	cytosol	27.67	36.31
VIT_09s0096g00930.t01	Wine grape	cytosol, endoplasmic reticulum	9.01	36.13
CDY03593	Canola	cytosol	32.49	35.8
Bra037451.1-P	Field mustard	cytosol	31.24	35.77
CDY45054	Canola	cytosol	31.24	35.69
Solyc04g009120.1.1	Tomato	cytosol	24.21	35.65
Bra005273.1-P	Field mustard	cytosol	31.13	35.57
CDY26957	Canola	cytosol	20.65	35.37
CDY66057	Canola	cytosol	27.46	35.22
Bra014241.1-P	Field mustard	cytosol	33.86	34.92
AT1G50180.1	Thale cress	cytosol	31.34	34.89
AT1G53350.1	Thale cress	cytosol	33.12	34.88
CDY24492	Canola	cytosol	29.45	34.69
CDY33605	Canola	cytosol	30.82	34.63
AT1G59620.2	Thale cress	cytosol	26.52	34.19
CDY05425	Canola	cytosol	18.55	34.17
CDY05420	Canola	cytosol	20.02	34.17
Solyc04g026110.2.1	Tomato	cytosol	15.83	34.16
AT5G43470.1	Thale cress	cytosol	32.49	34.14
Bra035424.1-P	Field mustard	cytosol	32.18	34.11
CDY30905	Canola	cytosol	15.93	34.08
CDY66072	Canola	cytosol	30.08	34.0
CDY45136	Canola	extracellular, golgi	14.47	33.99
GSMUA_AchrUn_...	Banana	cytosol	9.75	33.94
Bra005278.1-P	Field mustard	cytosol	18.45	33.85
CDY05433	Canola	cytosol	23.58	33.63
AT5G35450.1	Thale cress	cytosol	31.76	33.63
AT5G48620.1	Thale cress	cytosol	31.97	33.59
AT1G58390.1	Thale cress	cytosol	31.87	33.52
AT1G58410.2	Thale cress	cytosol	31.45	33.37
Bra036206.1-P	Field mustard	cytosol	31.34	33.33
CDY48845	Canola	nucleus	31.34	33.3
Bra013134.1-P	Field mustard	cytosol, nucleus, peroxisome	31.76	33.26
Solyc04g009240.1.1	Tomato	cytosol	29.45	33.25
Bra027843.1-P	Field mustard	cytosol, mitochondrion	21.7	33.17
CDY66341	Canola	nucleus	26.62	33.16
CDX92335	Canola	cytosol	30.08	33.14
AT1G58400.2	Thale cress	cytosol	31.55	33.08
Solyc04g009260.1.1	Tomato	cytosol	29.35	32.98
Solyc04g009690.1.1	Tomato	cytosol	28.83	32.97
Solyc04g009660.2.1	Tomato	cytosol	28.83	32.89
CDX75041	Canola	cytosol	26.52	32.77
Bra005277.1-P	Field mustard	cytosol	11.74	32.75
Solyc04g009150.1.1	Tomato	cytosol	28.93	32.7
CDX75047	Canola	cytosol	23.69	32.66
Solyc04g009250.1.1	Tomato	cytosol	28.72	32.62
Bra027866.1-P	Field mustard	cytosol	31.76	32.62
CDY38706	Canola	cytosol	13.84	32.59
Solyc04g009290.1.1	Tomato	cytosol	28.83	32.58
CDX93129	Canola	cytosol	31.97	32.38
CDY28958	Canola	cytosol	29.87	32.35
AT1G59780.1	Thale cress	cytosol	30.71	32.34
CDY30895	Canola	cytosol	23.48	32.28
GSMUA_Achr7P20240_001	Banana	mitochondrion	23.58	32.19
CDX84131	Canola	cytosol	25.37	32.05
CDX75044	Canola	cytosol	19.71	31.97
TraesCS2D01G510300.1	Wheat	cytosol	18.03	31.44
Solyc04g009110.1.1	Tomato	cytosol	27.78	31.44
CDY19984	Canola	cytosol	30.92	31.18
Solyc04g009130.2.1	Tomato	cytosol	25.26	31.14
Bra040891.1-P	Field mustard	cytosol	11.22	31.1
Bra013213.1-P	Field mustard	cytosol	31.24	30.69
AT1G58807.1	Thale cress	cytosol, extracellular, nucleus	32.7	30.68
AT1G59124.2	Thale cress	cytosol, extracellular, nucleus	32.7	30.68
TraesCS6D01G387400.1	Wheat	cytosol	18.34	30.65
CDY65486	Canola	mitochondrion	29.35	30.37
CDX85375	Canola	cytosol	20.96	30.12
Bra027834.1-P	Field mustard	cytosol	31.03	30.11
TraesCS2B01G151600.2	Wheat	cytosol	26.73	30.11
CDY00088	Canola	cytosol	20.34	29.94
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	23.69	29.85
AT1G58848.1	Thale cress	nucleus	32.6	29.65
AT1G59218.2	Thale cress	nucleus	32.6	29.65
GSMUA_Achr7P20230_001	Banana	cytosol	27.57	29.62
TraesCS6A01G404000.1	Wheat	cytosol	16.98	29.62
TraesCS2D01G510000.1	Wheat	cytosol	23.9	29.61
GSMUA_AchrUn_...	Banana	cytosol	23.27	29.6
CDY15085	Canola	extracellular, golgi	29.04	29.56
Os11t0633500-01	Rice	cytosol	16.35	29.55
CDY05424	Canola	cytosol	15.62	29.39
Bra018448.1-P	Field mustard	cytosol	29.87	29.38
TraesCS7B01G501200.1	Wheat	cytosol	16.88	29.27
TraesCS7A01G562000.1	Wheat	cytosol	26.73	29.14
TraesCS6B01G447900.1	Wheat	cytosol	22.33	29.06
HORVU2Hr1G022620.8	Barley	cytosol	26.52	29.05
TraesCS7A01G562500.1	Wheat	cytosol	16.88	29.01
TraesCS2D01G510100.1	Wheat	cytosol	14.78	28.95
TraesCS6B01G447800.1	Wheat	cytosol	16.14	28.95
TraesCS6B01G448100.1	Wheat	cytosol	23.9	28.93
HORVU1Hr1G075170.1	Barley	cytosol	26.31	28.85
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	23.9	28.82
GSMUA_Achr7P20220_001	Banana	cytosol	27.15	28.81
TraesCS7B01G501900.1	Wheat	cytosol	26.21	28.7
Bra040841.1-P	Field mustard	cytosol	24.21	28.66
Solyc07g009190.1.1	Tomato	cytosol	14.57	28.66
TraesCS7B01G501100.1	Wheat	cytosol	26.1	28.59
TraesCS1B01G336700.1	Wheat	cytosol	24.0	28.55
TraesCS2A01G477200.1	Wheat	cytosol	20.23	28.55
TraesCS1D01G324700.2	Wheat	cytosol	26.0	28.51
TraesCS7B01G500700.1	Wheat	cytosol	25.37	28.5
TraesCS1A01G323600.1	Wheat	cytosol	25.89	28.36
TraesCS7D01G548100.1	Wheat	cytosol	26.31	28.23
TraesCS7B01G500900.1	Wheat	cytosol	25.89	28.23
TraesCS7B01G423500.1	Wheat	cytosol	25.58	28.18
TraesCS7B01G500800.1	Wheat	cytosol	21.28	28.16
TraesCS6D01G387500.1	Wheat	cytosol, plastid	23.27	28.07
OQU82378	Sorghum	nucleus	24.63	28.04
TraesCS2B01G536900.1	Wheat	cytosol	16.25	28.03
TraesCS5D01G269100.1	Wheat	cytosol	20.13	27.87
CDX89618	Canola	cytosol	27.67	27.82
TraesCS7B01G449900.2	Wheat	cytosol	25.68	27.68
TraesCS7A01G561700.1	Wheat	cytosol	25.05	27.53
AT1G58602.2	Thale cress	cytosol	32.7	27.42
CDX86272	Canola	cytosol	8.7	27.39
TraesCS5A01G261700.1	Wheat	cytosol	25.26	27.36
TraesCS7B01G501000.1	Wheat	cytosol	24.95	27.23
TraesCS2B01G507100.1	Wheat	cytosol	27.04	27.19
TraesCS2A01G459100.1	Wheat	plastid	22.64	27.17
TraesCS7A01G561900.4	Wheat	cytosol	26.1	27.12
HORVU5Hr1G072540.26	Barley	cytosol	24.95	27.08
CDY45150	Canola	endoplasmic reticulum	27.25	26.97
Solyc10g008220.2.1	Tomato	endoplasmic reticulum	22.96	26.9
TraesCS6B01G448400.1	Wheat	cytosol	23.9	26.89
TraesCS5A01G261600.1	Wheat	cytosol	24.74	26.79
Solyc11g020100.1.1	Tomato	cytosol, plasma membrane	17.51	26.72
CDY38710	Canola	cytosol, mitochondrion	10.48	26.53
TraesCS2D01G481300.1	Wheat	cytosol	26.52	26.44
Bra005270.1-P	Field mustard	cytosol	22.33	26.43
Solyc01g087200.2.1	Tomato	cytosol	24.32	26.36
Bra005271.1-P	Field mustard	cytosol	31.66	26.22
Bra037448.1-P	Field mustard	cytosol	23.38	26.2
Os10t0183000-01	Rice	plasma membrane	24.53	26.17
Solyc01g090430.2.1	Tomato	extracellular	24.21	26.01
CDY05434	Canola	cytosol	30.29	26.01
TraesCS5B01G259900.1	Wheat	cytosol	25.26	25.94
CDY27293	Canola	cytosol, mitochondrion	7.97	25.68
Bra040843.1-P	Field mustard	endoplasmic reticulum, extracellular	17.92	25.52
Solyc07g009180.1.1	Tomato	nucleus	24.11	25.5
TraesCS2B01G507000.1	Wheat	cytosol	19.5	25.44
Solyc10g047320.1.1	Tomato	nucleus	23.58	25.42
Bra029405.1-P	Field mustard	endoplasmic reticulum, extracellular	30.71	25.22
Solyc08g005500.2.1	Tomato	cytosol	19.18	25.03
Os03t0709200-01	Rice	cytosol	25.16	25.03
Solyc11g069020.1.1	Tomato	cytosol	23.38	24.94
Solyc10g051050.1.1	Tomato	cytosol	14.36	24.77
Solyc04g012010.2.1	Tomato	cytosol	21.49	24.7
Solyc08g074250.1.1	Tomato	cytosol	22.54	24.68
Solyc04g007070.2.1	Tomato	nucleus	22.22	24.4
Solyc11g006630.1.1	Tomato	cytosol, plastid	21.91	24.36
Solyc04g011960.1.1	Tomato	cytosol	22.54	24.21
Solyc04g007050.2.1	Tomato	cytosol	20.75	24.21
Solyc11g006640.1.1	Tomato	cytosol	21.59	24.18
Solyc11g006530.1.1	Tomato	cytosol, plastid	21.91	24.13
Solyc04g011990.1.1	Tomato	cytosol	22.75	24.08
Solyc10g008240.2.1	Tomato	nucleus	22.43	24.07
TraesCS6B01G448000.1	Wheat	cytosol	6.81	23.99
Solyc12g017800.1.1	Tomato	cytosol	21.49	23.81
Solyc03g005660.2.1	Tomato	cytosol	21.49	23.67
Solyc04g015220.2.1	Tomato	cytosol	20.02	23.67
CDX86270	Canola	cytosol	8.7	23.65
Solyc04g011980.1.1	Tomato	cytosol	21.8	23.61
Solyc10g008230.1.1	Tomato	cytosol	19.39	23.6
Solyc07g005770.2.1	Tomato	cytosol	20.34	23.57
Solyc12g009460.1.1	Tomato	cytosol	21.28	23.5
Solyc05g008070.2.1	Tomato	mitochondrion	20.55	23.45
Solyc04g007060.2.1	Tomato	nucleus	21.59	23.44
Solyc07g049700.1.1	Tomato	cytosol	21.07	23.43
Zm00001d045512_P001	Maize	cytosol, mitochondrion	20.44	23.41
Solyc12g017810.1.1	Tomato	cytosol	5.35	23.29
TraesCS2A01G129300.1	Wheat	cytosol	6.08	23.2
Solyc11g006520.1.1	Tomato	cytosol, plastid	21.28	23.04
Solyc04g007030.2.1	Tomato	endoplasmic reticulum	21.28	22.96
Solyc12g009450.1.1	Tomato	mitochondrion	23.48	22.95
Solyc06g062440.2.1	Tomato	nucleus	16.46	22.92
Solyc04g015210.2.1	Tomato	nucleus	22.01	22.78
Solyc02g027080.1.1	Tomato	cytosol, plasma membrane	22.12	22.71
TraesCS7B01G501300.1	Wheat	cytosol	6.08	21.01
CDX75042	Canola	plastid	20.44	19.98
CDY60887	Canola	cytosol	26.42	18.09
Bra037453.1-P	Field mustard	nucleus	9.64	8.47

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531	UniProt:K4DHG5	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF8	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc12g096920.1	EnsemblPlants:Solyc12g096920.1.1	UniParc:UPI0002769ECF	SEG:seg

Description

No Description!

Coordinates

chr12:+:65641646..65645096

Molecular Weight (calculated)

111028.0 Da

IEP (calculated)

8.908

GRAVY (calculated)

-0.332

Length

954 amino acids

Sequence
(BLAST)

001: MYDSSLFGLL QMLYDTLKNE AKFLSNVSNQ IQDIRAEINR IQCFLQDADA NKPEYETVRN WIADIREVAY DVENILEKYM HKVVLRRDRS LWKENINLHN
101: IGLETKDVMS RIDNIKRCMK TYVDTGIRAI CQGDTSSERS QWLTRSYSHL VDEDFVGLVE EVNKLVDELI DDEFYVVFAI CGMGGLGKTT LARKAYRHVD
201: VQSHFQAFAW ASISRQWQAR DVLMSILTKL EPENRTRINM MMDDELVKAL YNVQQRKKCL IVLDDIWSTN FWNSVKHAFP KGKGSRSKIL LTTRKKDVCT
301: HIDPTCFLFE PRCLDAEESW KLLHKKAFPR VNTPDLKIDL ELERLGKEMV SKCGGLPLAI IVLAGLLARR PKIDEWRRTC QNLNLHMSGE SFEQDGGIHG
401: VLALSYYDLP YQLKPCFLYL GIFPEDQKIS ARRLYQLWAA EGIISLEGNR GEETAMMEIG ERYLHELAQR YMVQVQLEET TGRIKSCRFH DLMRDTCLSK
501: AKEENFLKTV SPQHLHQSMH CSTSATATST RTVRRLSITV DNEVQNYFST DDKSFQHVRA AFFFPRQTGR EGTEYPLPLF QGLCNNFSML RVLHLEKFTF
601: EEILPKAIGN LVYLRYLSLR HSHFQKLSSS VGNLKYLQTL DLRVNFFSYL TLPNTIQKLK NLRNLYLPPS HQHTYKLDLS PLSHLEILKN FDTQVSPFRD
701: IFKLTKLQKL SAVLSLDSDE MEEMIKHLTL RSGRLRETSF RIYYRFHSEK EVNILKLLLG CHHLRKLDLI GHITKLPEHH SFSQSLTKLT LRKSGLEEDP
801: MVILQKLPKL FTLSLRGNAF IGKEMCCSPQ GFPLLKTLKL QGLLNLESWR VETGALPNLV HLEIDECKKL EMVPEGLIYL SKIQEVMIIN MPDNFQKRLQ
901: EVQREEYYKV QFRKSFDTKK ISKIKFNMRI SGPMFGGLLQ TIYPSTVPKE WKML

Best Arabidopsis Sequence Match ( AT1G53350.1 )
(BLAST)

001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH

Arabidopsis Description

RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.