Factsheet for Solyc04g007030.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

endoplasmic reticulum: 29145071

msms PMID: 29145071 doi

P Ibort, H Imai, M Uemura, R Aroca

Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g007060.2.1	Tomato	nucleus	66.18	66.55
Solyc04g007070.2.1	Tomato	nucleus	63.8	64.9
Solyc04g015210.2.1	Tomato	nucleus	45.36	43.49
Solyc10g047320.1.1	Tomato	nucleus	43.21	43.16
Solyc01g090430.2.1	Tomato	extracellular	42.08	41.89
Solyc04g007050.2.1	Tomato	cytosol	37.56	40.59
Solyc03g005660.2.1	Tomato	cytosol	38.57	39.38
Solyc10g008220.2.1	Tomato	endoplasmic reticulum	32.81	35.63
Solyc12g006040.1.1	Tomato	cytosol	11.88	34.31
Solyc12g010660.1.1	Tomato	cytosol	8.94	31.73
Solyc07g009190.1.1	Tomato	cytosol	16.86	30.72
KRG88520	Soybean	plastid	11.09	28.24
VIT_16s0022g01330.t01	Wine grape	cytosol	20.02	27.96
KRG88521	Soybean	cytosol	26.81	27.49
KRH01598	Soybean	cytosol	27.49	27.49
Solyc12g017810.1.1	Tomato	cytosol	6.79	27.4
Solyc08g074250.1.1	Tomato	cytosol	26.92	27.32
Solyc10g051050.1.1	Tomato	cytosol	17.08	27.31
VIT_15s0045g00980.t01	Wine grape	cytosol	18.44	27.3
KRH01595	Soybean	cytosol	27.49	27.12
Solyc11g069020.1.1	Tomato	cytosol	27.38	27.07
Solyc01g087200.2.1	Tomato	cytosol	26.58	26.7
KRH17117	Soybean	cytosol	26.36	26.57
Solyc10g008240.2.1	Tomato	nucleus	26.7	26.55
Solyc04g015220.2.1	Tomato	cytosol	24.21	26.52
Solyc08g005500.2.1	Tomato	cytosol	21.83	26.4
Solyc12g009460.1.1	Tomato	cytosol	25.79	26.39
Os11t0633500-01	Rice	cytosol	15.5	25.95
Solyc04g011980.1.1	Tomato	cytosol	25.79	25.88
Solyc07g049700.1.1	Tomato	cytosol	25.11	25.87
Solyc11g006630.1.1	Tomato	cytosol, plastid	25.11	25.87
Solyc12g017800.1.1	Tomato	cytosol	25.11	25.78
KRH01534	Soybean	cytosol	24.32	25.72
Solyc05g008070.2.1	Tomato	mitochondrion	24.32	25.72
Solyc06g062440.2.1	Tomato	nucleus	19.91	25.69
Solyc11g006530.1.1	Tomato	cytosol, plastid	25.11	25.64
Solyc11g020100.1.1	Tomato	cytosol, plasma membrane	18.1	25.6
TraesCS2D01G510100.1	Wheat	cytosol	14.03	25.46
Solyc02g027080.1.1	Tomato	cytosol, plasma membrane	26.7	25.4
TraesCS6B01G447800.1	Wheat	cytosol	15.27	25.38
Solyc04g011960.1.1	Tomato	cytosol	25.45	25.34
KRH45220	Soybean	cytosol, extracellular, plastid	25.57	25.28
Solyc10g008230.1.1	Tomato	cytosol	22.4	25.26
TraesCS2D01G510300.1	Wheat	cytosol	15.61	25.23
TraesCS7A01G562500.1	Wheat	cytosol	15.84	25.23
Solyc12g009450.1.1	Tomato	mitochondrion	27.83	25.2
VIT_15s0045g01020.t01	Wine grape	cytosol	18.33	25.19
Solyc11g006640.1.1	Tomato	cytosol	24.21	25.12
Solyc07g009180.1.1	Tomato	nucleus	25.57	25.06
Solyc11g006520.1.1	Tomato	cytosol, plastid	24.66	24.74
VIT_15s0046g02800.t01	Wine grape	cytosol	19.12	24.64
OQU82378	Sorghum	nucleus	23.3	24.58
Solyc07g005770.2.1	Tomato	cytosol	22.85	24.54
Solyc04g011990.1.1	Tomato	cytosol	25.0	24.53
TraesCS2B01G536900.1	Wheat	cytosol	15.27	24.41
TraesCS7B01G500700.1	Wheat	cytosol	23.42	24.38
VIT_15s0046g02750.t01	Wine grape	cytosol	25.79	24.36
TraesCS6D01G387400.1	Wheat	cytosol	15.72	24.34
TraesCS2B01G151600.2	Wheat	cytosol	23.3	24.32
GSMUA_Achr7P20240_001	Banana	mitochondrion	19.23	24.32
TraesCS2A01G477200.1	Wheat	cytosol	18.55	24.26
VIT_15s0046g03660.t01	Wine grape	cytosol	23.08	24.26
Solyc04g012010.2.1	Tomato	cytosol	22.62	24.1
TraesCS2D01G510000.1	Wheat	cytosol	20.93	24.03
TraesCS7B01G423500.1	Wheat	cytosol	23.53	24.02
VIT_15s0046g02820.t01	Wine grape	cytosol	25.45	23.83
TraesCS7B01G501200.1	Wheat	cytosol	14.82	23.82
KRH23932	Soybean	cytosol	25.0	23.79
Solyc04g026110.2.1	Tomato	cytosol	11.88	23.76
GSMUA_Achr7P20220_001	Banana	cytosol	23.87	23.47
TraesCS1B01G336700.1	Wheat	cytosol	21.27	23.44
VIT_00s0448g00020.t01	Wine grape	cytosol	24.89	23.33
HORVU2Hr1G022620.8	Barley	cytosol	22.96	23.31
TraesCS7A01G561700.1	Wheat	cytosol	22.85	23.27
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	20.81	23.26
Solyc04g009660.2.1	Tomato	cytosol	21.95	23.21
TraesCS7A01G562000.1	Wheat	cytosol	22.96	23.2
GSMUA_Achr7P20230_001	Banana	cytosol	23.3	23.2
TraesCS7B01G501900.1	Wheat	cytosol	22.85	23.19
VIT_15s0046g02730.t01	Wine grape	cytosol	24.09	23.15
HORVU1Hr1G075170.1	Barley	cytosol	22.74	23.1
TraesCS7B01G501100.1	Wheat	cytosol	22.74	23.08
Solyc04g009150.1.1	Tomato	cytosol	21.83	22.87
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	19.57	22.85
TraesCS6A01G404000.1	Wheat	cytosol	14.14	22.85
GSMUA_AchrUn_...	Banana	cytosol	19.34	22.8
VIT_15s0045g00680.t01	Wine grape	cytosol	19.91	22.77
Solyc04g009250.1.1	Tomato	cytosol	21.61	22.74
TraesCS1A01G323600.1	Wheat	cytosol	22.4	22.73
Solyc04g009120.1.1	Tomato	cytosol	16.63	22.69
TraesCS7B01G500900.1	Wheat	cytosol	22.4	22.63
TraesCS7B01G501000.1	Wheat	cytosol	22.29	22.54
Solyc04g009110.1.1	Tomato	cytosol	21.49	22.54
TraesCS6D01G387500.1	Wheat	cytosol, plastid	20.14	22.5
Solyc04g009260.1.1	Tomato	cytosol	21.61	22.5
TraesCS7B01G449900.2	Wheat	cytosol	22.51	22.49
Solyc04g009240.1.1	Tomato	cytosol	21.49	22.49
TraesCS6B01G448100.1	Wheat	cytosol	20.02	22.46
TraesCS1D01G324700.2	Wheat	cytosol	22.06	22.41
Solyc04g009290.1.1	Tomato	cytosol	21.38	22.39
TraesCS7B01G500800.1	Wheat	cytosol	18.21	22.33
Solyc04g009690.1.1	Tomato	cytosol	21.04	22.3
VIT_15s0045g00880.t01	Wine grape	cytosol	18.89	22.12
TraesCS6B01G447900.1	Wheat	cytosol	18.33	22.1
VIT_15s0046g02810.t01	Wine grape	cytosol	23.42	22.09
TraesCS7D01G548100.1	Wheat	cytosol	22.17	22.05
TraesCS5D01G269100.1	Wheat	cytosol	16.97	21.77
TraesCS7A01G561900.4	Wheat	cytosol	22.51	21.68
TraesCS2A01G459100.1	Wheat	plastid	19.34	21.51
TraesCS2B01G507100.1	Wheat	cytosol	23.08	21.5
TraesCS2B01G507000.1	Wheat	cytosol	17.76	21.48
TraesCS6B01G448000.1	Wheat	cytosol	6.56	21.4
TraesCS6B01G448400.1	Wheat	cytosol	20.48	21.34
Solyc04g009130.2.1	Tomato	cytosol	18.67	21.32
TraesCS2D01G481300.1	Wheat	cytosol	23.08	21.32
Solyc12g096920.1.1	Tomato	extracellular	22.96	21.28
Os03t0709200-01	Rice	cytosol	22.96	21.17
VIT_15s0045g00920.t01	Wine grape	cytosol	12.22	20.77
TraesCS5A01G261700.1	Wheat	cytosol	20.25	20.32
TraesCS7B01G501300.1	Wheat	cytosol	6.33	20.29
VIT_15s0045g00810.t01	Wine grape	cytosol	9.73	20.19
HORVU5Hr1G072540.26	Barley	cytosol	20.02	20.14
GSMUA_AchrUn_...	Banana	cytosol	6.22	20.07
TraesCS2A01G129300.1	Wheat	cytosol	5.66	20.0
VIT_15s0021g00130.t01	Wine grape	cytosol, nucleus, plastid	7.01	19.94
TraesCS5A01G261600.1	Wheat	cytosol	19.8	19.86
Zm00001d045512_P001	Maize	cytosol, mitochondrion	18.67	19.81
VIT_15s0045g01010.t01	Wine grape	cytosol	4.3	19.69
VIT_15s0045g00640.t01	Wine grape	cytosol	10.75	19.67
Os10t0183000-01	Rice	plasma membrane	19.8	19.57
TraesCS5B01G259900.1	Wheat	cytosol	20.48	19.48

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531
InterPro:IPR032675	UniProt:K4BNL0	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931
PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF17	SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc04g007030.2
EnsemblPlants:Solyc04g007030.2.1	UniParc:UPI00027667C0	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4:-:742844..747712

Molecular Weight (calculated)

101743.0 Da

IEP (calculated)

7.254

GRAVY (calculated)

-0.268

Length

884 amino acids

Sequence
(BLAST)

001: MADAAVNFLL ENLLQLLSDH INLIHGLDDE FNSLLEEVQR LKVLVDDACK FQNDNDTSMV KEVQIIIHRV EDLTDKFLVQ AKLHQQGSIA KRFHSTIISD
101: FAIQIRKIND DLKIFHQNNK QAFTTNITVH IPKITQRITQ GEDDEVVGFD EEAQQVMKRL VEGPNCLDII PVVGMPGLGK STLARKIYNE FEFSYEFFSI
201: VWVYVGREYK IKDTCVRILK CFEKSIEEDV MNGDVDALGK AIRDAIRDRG GRCLIVLDDV WEAEVVDVVK RVLPGNNKGH RIMMTTRHAN LASYANPGPY
301: YMKPLHAEQS FELLVNRAFG NGNSCPVEFV ELGQSIAHKC NGIPLQIVLI AGILRGLTDR RYWERVDKNL SQLYHLYDEE DKYRGVFVEM SYNHLPQDVQ
401: TCFLYCGVFP QGFDIPAWKL IRLWIAEGLI KPQQSPYTLE EIAEFYLNHL VQRNLVILSQ KRSDGQIKTC RLHDLLHEFC RDEASKKWLF QHVRPTPDHH
501: NYLRSIQDLD ACRRLSIQPS DISEFLSTKP FAEHVRSFYC FSSKQKPINL STMETKFIHN AFPLIRVVDV ESINFKFSPY FNQLFHLRYI AISGDIKALP
601: PPFGNFWNLQ TLIINTSTSE PTLDVKADLW NLLQLRHLHT NIPAKLPSPT TTTGKPSCLQ TLSMVAPESC EEQVLAKACN VKKLSIRGQM EAFLGAYKGG
701: INNLEELKRL EHLKLLNDVP HYMNKTVQLP ATFFRLVRTV KKLTLRNTRF SWSEAEKLGQ LESLEVLKLK ENAFVGDTWK PELGGFCKLR VLWIERAELE
801: TWEASNLNYP ILRNLVLVSC DKLNAVPVEL ADIPNLREMK LENTIKAVKS AKDILERKKS KDEKFKCSIF PRDADHSEVE RREL

Best Arabidopsis Sequence Match ( AT1G53350.1 )
(BLAST)

001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH

Arabidopsis Description

RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.