Factsheet for Solyc06g062440.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012486	Potato	cytosol	90.66	71.05
Solyc07g009190.1.1	Tomato	cytosol	43.21	61.03
Solyc07g009180.1.1	Tomato	nucleus	55.04	41.8
Solyc01g087200.2.1	Tomato	cytosol	44.09	34.32
Solyc08g074250.1.1	Tomato	cytosol	43.21	33.98
Solyc04g011980.1.1	Tomato	cytosol	39.85	30.99
Solyc04g012010.2.1	Tomato	cytosol	37.52	30.96
Solyc04g011960.1.1	Tomato	cytosol	39.71	30.63
Solyc10g051050.1.1	Tomato	cytosol	24.67	30.56
Solyc04g011990.1.1	Tomato	cytosol	38.83	29.52
Solyc12g017810.1.1	Tomato	cytosol	8.91	27.85
Solyc10g008220.2.1	Tomato	endoplasmic reticulum	32.99	27.76
Solyc12g006040.1.1	Tomato	cytosol	11.82	26.47
Solyc11g006530.1.1	Tomato	cytosol, plastid	33.43	26.44
Solyc12g017800.1.1	Tomato	cytosol	32.7	26.02
Solyc10g008240.2.1	Tomato	nucleus	33.58	25.87
Solyc07g049700.1.1	Tomato	cytosol	32.26	25.76
Solyc11g069020.1.1	Tomato	cytosol	33.28	25.5
Solyc11g006640.1.1	Tomato	cytosol	31.53	25.35
Solyc12g010660.1.1	Tomato	cytosol	9.05	24.9
Solyc11g006630.1.1	Tomato	cytosol, plastid	31.09	24.83
Solyc07g005770.2.1	Tomato	cytosol	29.49	24.54
Solyc10g047320.1.1	Tomato	nucleus	31.53	24.41
Solyc11g006520.1.1	Tomato	cytosol, plastid	31.39	24.4
TraesCS7B01G501200.1	Wheat	cytosol	19.42	24.18
Solyc05g008070.2.1	Tomato	mitochondrion	29.34	24.04
Solyc01g090430.2.1	Tomato	extracellular	30.36	23.42
Solyc12g009450.1.1	Tomato	mitochondrion	33.14	23.26
VIT_15s0045g01020.t01	Wine grape	cytosol	21.75	23.17
Solyc12g009460.1.1	Tomato	cytosol	28.91	22.92
VIT_16s0022g01330.t01	Wine grape	cytosol	21.17	22.91
Solyc04g015220.2.1	Tomato	cytosol	26.86	22.8
Solyc03g005660.2.1	Tomato	cytosol	28.61	22.63
Solyc10g008230.1.1	Tomato	cytosol	25.84	22.58
Solyc11g020100.1.1	Tomato	cytosol, plasma membrane	20.58	22.56
Solyc02g027080.1.1	Tomato	cytosol, plasma membrane	30.51	22.5
Solyc08g005500.2.1	Tomato	cytosol	23.65	22.16
Solyc04g007070.2.1	Tomato	nucleus	27.3	21.52
TraesCS6D01G387400.1	Wheat	cytosol	17.52	21.02
Solyc04g007060.2.1	Tomato	nucleus	26.57	20.71
TraesCS6A01G404000.1	Wheat	cytosol	16.5	20.66
GSMUA_Achr7P20240_001	Banana	mitochondrion	21.02	20.6
Solyc04g007030.2.1	Tomato	endoplasmic reticulum	25.69	19.91
Solyc04g015210.2.1	Tomato	nucleus	26.13	19.41
KRH01598	Soybean	cytosol	24.82	19.23
VIT_15s0046g03660.t01	Wine grape	cytosol	23.5	19.14
GSMUA_AchrUn_...	Banana	cytosol	20.73	18.93
KRH17117	Soybean	cytosol	24.09	18.81
TraesCS2B01G507000.1	Wheat	cytosol	20.0	18.74
KRG88521	Soybean	cytosol	23.5	18.68
Solyc04g007050.2.1	Tomato	cytosol	22.04	18.46
VIT_15s0045g00980.t01	Wine grape	cytosol	16.06	18.43
VIT_15s0046g02800.t01	Wine grape	cytosol	18.39	18.37
KRH01595	Soybean	cytosol	23.94	18.3
TraesCS6B01G447900.1	Wheat	cytosol	19.56	18.28
KRH01534	Soybean	cytosol	22.19	18.18
TraesCS6D01G387500.1	Wheat	cytosol, plastid	20.88	18.08
GSMUA_Achr7P20230_001	Banana	cytosol	23.36	18.02
KRH45220	Soybean	cytosol, extracellular, plastid	23.5	18.01
Solyc04g009240.1.1	Tomato	cytosol	22.19	17.99
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	19.85	17.97
TraesCS2B01G151600.2	Wheat	cytosol	22.19	17.95
TraesCS2D01G510300.1	Wheat	cytosol	14.31	17.92
TraesCS7B01G500700.1	Wheat	cytosol	22.19	17.9
TraesCS6B01G448100.1	Wheat	cytosol	20.44	17.77
Solyc04g009660.2.1	Tomato	cytosol	21.61	17.7
GSMUA_Achr7P20220_001	Banana	cytosol	23.21	17.69
HORVU2Hr1G022620.8	Barley	cytosol	22.48	17.68
Solyc04g009260.1.1	Tomato	cytosol	21.9	17.67
Solyc04g009150.1.1	Tomato	cytosol	21.75	17.65
TraesCS7A01G561700.1	Wheat	cytosol	22.34	17.63
Solyc04g009690.1.1	Tomato	cytosol	21.46	17.63
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	20.29	17.57
Solyc04g009290.1.1	Tomato	cytosol	21.61	17.54
TraesCS2D01G510000.1	Wheat	cytosol	19.71	17.53
VIT_15s0046g02750.t01	Wine grape	cytosol	23.94	17.52
KRH23932	Soybean	cytosol	23.65	17.44
VIT_15s0046g02820.t01	Wine grape	cytosol	23.94	17.37
TraesCS7D01G548100.1	Wheat	cytosol	22.48	17.32
VIT_15s0046g02810.t01	Wine grape	cytosol	23.65	17.29
VIT_15s0046g02730.t01	Wine grape	cytosol	23.21	17.28
HORVU1Hr1G075170.1	Barley	cytosol	21.9	17.24
Solyc04g009110.1.1	Tomato	cytosol	21.17	17.2
TraesCS7B01G501000.1	Wheat	cytosol	21.9	17.16
TraesCS2A01G477200.1	Wheat	cytosol	16.93	17.16
Solyc04g009120.1.1	Tomato	cytosol	16.2	17.13
TraesCS7B01G423500.1	Wheat	cytosol	21.61	17.09
OQU82378	Sorghum	nucleus	20.88	17.06
TraesCS7B01G449900.2	Wheat	cytosol	22.04	17.06
TraesCS7A01G562000.1	Wheat	cytosol	21.75	17.03
TraesCS7B01G500900.1	Wheat	cytosol	21.75	17.03
TraesCS5A01G261700.1	Wheat	cytosol	21.9	17.03
TraesCS7B01G501900.1	Wheat	cytosol	21.61	16.99
TraesCS1B01G336700.1	Wheat	cytosol	19.85	16.96
HORVU5Hr1G072540.26	Barley	cytosol	21.61	16.84
TraesCS5D01G269100.1	Wheat	cytosol	16.93	16.84
TraesCS5A01G261600.1	Wheat	cytosol	21.61	16.8
Solyc04g009250.1.1	Tomato	cytosol	20.58	16.79
TraesCS1D01G324700.2	Wheat	cytosol	21.31	16.78
TraesCS7B01G501100.1	Wheat	cytosol	21.31	16.76
VIT_00s0448g00020.t01	Wine grape	cytosol	23.07	16.75
Os10t0183000-01	Rice	plasma membrane	21.75	16.67
TraesCS7A01G561900.4	Wheat	cytosol	22.19	16.56
TraesCS7B01G500800.1	Wheat	cytosol	17.37	16.5
Solyc12g096920.1.1	Tomato	extracellular	22.92	16.46
TraesCS1A01G323600.1	Wheat	cytosol	20.88	16.42
TraesCS6B01G447800.1	Wheat	cytosol	12.7	16.35
TraesCS2A01G459100.1	Wheat	plastid	18.98	16.35
Solyc04g026110.2.1	Tomato	cytosol	10.51	16.29
Solyc04g009130.2.1	Tomato	cytosol	18.25	16.15
TraesCS5B01G259900.1	Wheat	cytosol	21.9	16.15
TraesCS2B01G507100.1	Wheat	cytosol	22.34	16.12
Os11t0633500-01	Rice	cytosol	12.41	16.1
TraesCS6B01G448400.1	Wheat	cytosol	19.56	15.8
TraesCS2D01G481300.1	Wheat	cytosol	22.04	15.78
GSMUA_AchrUn_...	Banana	cytosol	6.28	15.69
TraesCS7A01G562500.1	Wheat	cytosol	12.7	15.68
VIT_15s0045g00680.t01	Wine grape	cytosol	17.23	15.27
TraesCS2B01G536900.1	Wheat	cytosol	12.26	15.19
Os03t0709200-01	Rice	cytosol	21.17	15.12
VIT_15s0045g00880.t01	Wine grape	cytosol	16.2	14.7
Zm00001d045512_P001	Maize	cytosol, mitochondrion	17.66	14.53
TraesCS2D01G510100.1	Wheat	cytosol	10.22	14.37
KRG88520	Soybean	plastid	6.28	12.39
VIT_15s0045g00810.t01	Wine grape	cytosol	7.3	11.74
VIT_15s0045g00640.t01	Wine grape	cytosol	8.03	11.39
VIT_15s0045g00920.t01	Wine grape	cytosol	7.15	9.42
TraesCS6B01G448000.1	Wheat	cytosol	3.07	7.75
TraesCS2A01G129300.1	Wheat	cytosol	2.63	7.2
VIT_15s0045g01010.t01	Wine grape	cytosol	1.9	6.74
TraesCS7B01G501300.1	Wheat	cytosol	2.48	6.16
VIT_15s0021g00130.t01	Wine grape	cytosol, nucleus, plastid	1.31	2.89

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0043531	InterPro:IPR032675
InterPro:IPR036388	UniProt:K4C6X5	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931
PANTHER:PTHR43886	PANTHER:PTHR43886:SF17	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc06g062440.2
EnsemblPlants:Solyc06g062440.2.1	UniParc:UPI0002766765	InterPro:WH-like_DNA-bd_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chr6:-:39390527..39394340

Molecular Weight (calculated)

78673.2 Da

IEP (calculated)

8.432

GRAVY (calculated)

-0.157

Length

685 amino acids

Sequence
(BLAST)

001: MVDSVHDSLE YFQDFLESTS KRRQKHCRKV EELEREIRME VEKAEDVIEL KIMYGIMKKK GLSKTFLRTL VGKIDATRER KAIRKTLLPF VKKIDAVKSN
101: VMGISFGTNQ VQNPDSNPHK MNLLNLDNSW KLIRDRVFGV EHACPPELED IGEQIAQRCQ GLPLALLVVA GHLSKISRTR ESWNDVSKSV SKVVADESDI
201: CLGVLAMSYN YLPDHLKPCF LYMGVFPEDS VVNIVRLINL WISEGFISDE LVGRDCMEDL VSRNLVMVRN RSFNGETKTC GVHDLIRDLI LREAEKEKFL
301: EVTRIHEATN PSAEKLRSTR RYCFHSHNQA AFWKLSSIIR TLHFFDGFQK LSKQVPLLVS FKLLRVLAIL NDTFPTFPLE ITKLVQLRYL QFTCYDNIHW
401: SVSKLYNLQT FILGYGVAGL LPPTIPEGIW QMRNLRHLHI GDFFSFPIPS NKLQNLQELS RLALSSCTCE LFSAIPNLKK LKIIGNYLME MKRERLNSLS
501: CLEKLEILKY RDDGIQPSQI PSKYVLPASL KRLTLSCTSL PWEDMANIIT LPNLEVLKIK DNGFLGDVWM LNDEEIFKQL KFLLISWTGL KHWKAGSVNF
601: PKLQRLFLKR CMNLEEIPQD FGDICTLESI ELHKCSISAA TSGKNIQEEQ ESIGNECLSV ISKVVEKMAC VRLTRLDSLT RGDHL

Best Arabidopsis Sequence Match ( AT5G35450.1 )
(BLAST)

001: MAEGVVSFGV QKLWALLNRE SERLNGIDEQ VDGLKRQLRG LQSLLKDADA KKHGSDRVRN FLEDVKDLVF DAEDIIESYV LNKLRGEGKG VKNHVRRLAC
101: FLTDRHKVAS DIEGITKRIS KVIGEMQSLG IQQQIIDGGR SLSLQDIQRE IRQTFPNSSE SDLVGVEQSV EELVGPMVEI DNIQVVSISG MGGIGKTTLA
201: RQIFHHDLVR RHFDGFAWVC VSQQFTQKHV WQRILQELRP HDGEILQMDE YTIQGKLFQL LETGRYLVVL DDVWKEEDWD RIKEVFPRKR GWKMLLTSRN
301: EGVGLHADPT CLSFRARILN PKESWKLFER IVPRRNETEY EEMEAIGKEM VTYCGGLPLA VKVLGGLLAN KHTASEWKRV SENIGAQIVG KSCLDDNSLN
401: SVYRILSLSY EDLPTDLKHC FLYLAHFPED YKIKTRTLYS YWAAEGIYDG LTILDSGEDY LEELVRRNLV IAEKSNLSWR LKLCQMHDMM REVCISKAKV
501: ENFLQIIKVP TSTSTIIAQS PSRSRRLTVH SGKAFHILGH KKKVRSLLVL GLKEDLWIQS ASRFQSLPLL RVLDLSSVKF EGGKLPSSIG GLIHLRFLSL
601: HQAVVSHLPS TIRNLKLMLY LNLHVAIGVP VHVPNVLKEM LELRYLSLPL DMHDKTKLEL GDLVNLEYLW CFSTQHSSVT DLLRMTKLRF FGVSFSERCT
701: FENLSSSLRQ FRKLETLSFI YSRKTYMVDY VGEFVLDFIH LKKLSLGVHL SKIPDQHQLP PHIAHIYLLF CHMEEDPMPI LEKLLHLKSV ELRRKAFIGR
801: RMVCSKGGFP QLRALQISEQ SELEEWIVEE GSMPCLRDLI IHSCEKLEEL PDGLKYVTSL KELKIEGMKR EWKEKLVGED YYKVQHIPDV QFFNCDDEQR
901: E

Arabidopsis Description

RPP8L3Disease resistance RPP8-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.