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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • plasma membrane 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400062180 Potato cytosol 90.93 52.31
Solyc06g062440.2.1 Tomato nucleus 61.03 43.21
Solyc07g009180.1.1 Tomato nucleus 61.03 32.82
Solyc10g051050.1.1 Tomato cytosol 32.16 28.21
Solyc12g010660.1.1 Tomato cytosol 14.23 27.71
Solyc01g087200.2.1 Tomato cytosol 49.28 27.16
Solyc12g017810.1.1 Tomato cytosol 11.75 26.03
Solyc12g006040.1.1 Tomato cytosol 15.88 25.16
Solyc08g074250.1.1 Tomato cytosol 44.12 24.57
Solyc04g011980.1.1 Tomato cytosol 42.47 23.38
Solyc04g011960.1.1 Tomato cytosol 42.27 23.09
Solyc04g012010.2.1 Tomato cytosol 38.35 22.41
VIT_15s0045g01020.t01 Wine grape cytosol 29.69 22.39
Solyc10g008220.2.1 Tomato endoplasmic reticulum 36.7 21.87
Solyc04g011990.1.1 Tomato cytosol 40.62 21.86
TraesCS7B01G501200.1 Wheat cytosol 24.33 21.45
Solyc10g008240.2.1 Tomato nucleus 38.35 20.92
Solyc11g006640.1.1 Tomato cytosol 36.7 20.89
VIT_16s0022g01330.t01 Wine grape cytosol 27.22 20.85
Solyc11g069020.1.1 Tomato cytosol 38.14 20.69
Solyc11g006530.1.1 Tomato cytosol, plastid 36.49 20.44
Solyc07g049700.1.1 Tomato cytosol 35.88 20.28
Solyc11g006520.1.1 Tomato cytosol, plastid 36.7 20.2
TraesCS6D01G387400.1 Wheat cytosol 23.71 20.14
Solyc12g017800.1.1 Tomato cytosol 35.05 19.74
TraesCS6A01G404000.1 Wheat cytosol 22.27 19.74
Solyc08g005500.2.1 Tomato cytosol 29.48 19.56
Solyc11g006630.1.1 Tomato cytosol, plastid 34.43 19.46
Solyc10g008230.1.1 Tomato cytosol 31.13 19.26
Solyc05g008070.2.1 Tomato mitochondrion 33.2 19.26
Solyc10g047320.1.1 Tomato nucleus 35.05 19.21
Solyc04g015220.2.1 Tomato cytosol 31.96 19.21
TraesCS2D01G510300.1 Wheat cytosol 21.65 19.2
Solyc02g027080.1.1 Tomato cytosol, plasma membrane 35.46 18.51
GSMUA_Achr7P20240_001 Banana mitochondrion 26.39 18.31
Solyc12g009450.1.1 Tomato mitochondrion 36.29 18.03
Solyc03g005660.2.1 Tomato cytosol 32.16 18.01
Solyc12g009460.1.1 Tomato cytosol 31.96 17.94
Solyc01g090430.2.1 Tomato extracellular 32.78 17.91
TraesCS2B01G507000.1 Wheat cytosol 25.77 17.1
VIT_15s0045g00980.t01 Wine grape cytosol 20.82 16.92
Solyc07g005770.2.1 Tomato cytosol 28.66 16.89
VIT_15s0046g03660.t01 Wine grape cytosol 29.28 16.88
Solyc04g007030.2.1 Tomato endoplasmic reticulum 30.72 16.86
Solyc04g007070.2.1 Tomato nucleus 29.9 16.69
KRH17117 Soybean cytosol 30.1 16.65
Solyc11g020100.1.1 Tomato cytosol, plasma membrane 21.44 16.64
KRG88521 Soybean cytosol 29.28 16.47
TraesCS6B01G447900.1 Wheat cytosol 24.74 16.37
KRH01595 Soybean cytosol 30.1 16.29
Solyc04g007060.2.1 Tomato nucleus 29.48 16.27
KRH01534 Soybean cytosol 27.84 16.15
KRH01598 Soybean cytosol 29.28 16.06
Solyc04g009150.1.1 Tomato cytosol 27.84 16.0
Solyc04g009240.1.1 Tomato cytosol 27.63 15.86
Solyc04g007050.2.1 Tomato cytosol 26.6 15.77
Solyc04g015210.2.1 Tomato nucleus 29.9 15.73
TraesCS2B01G151600.2 Wheat cytosol 27.42 15.7
Solyc04g009290.1.1 Tomato cytosol 27.22 15.64
Solyc04g026110.2.1 Tomato cytosol 14.23 15.61
Solyc04g009690.1.1 Tomato cytosol 26.8 15.59
Solyc04g009260.1.1 Tomato cytosol 27.22 15.55
TraesCS7B01G500700.1 Wheat cytosol 27.22 15.55
TraesCS6A01G403900.1 Wheat plasma membrane, vacuole 24.12 15.46
TraesCS2D01G510000.1 Wheat cytosol 24.54 15.45
KRH45220 Soybean cytosol, extracellular, plastid 28.45 15.44
TraesCS7B01G449900.2 Wheat cytosol 28.04 15.37
GSMUA_AchrUn_... Banana cytosol 8.66 15.33
Solyc04g009660.2.1 Tomato cytosol 26.39 15.31
HORVU2Hr1G022620.8 Barley cytosol 27.42 15.27
TraesCS7B01G423500.1 Wheat cytosol 27.22 15.24
TraesCS7A01G561700.1 Wheat cytosol 27.22 15.21
KRH23932 Soybean cytosol 29.07 15.18
VIT_15s0046g02800.t01 Wine grape cytosol 21.44 15.16
TraesCS7A01G562000.1 Wheat cytosol 27.22 15.09
Solyc04g009110.1.1 Tomato cytosol 26.19 15.07
VIT_15s0046g02810.t01 Wine grape cytosol 29.07 15.05
Solyc04g009250.1.1 Tomato cytosol 25.98 15.0
TraesCS6B01G448300.2 Wheat cytosol, peroxisome, plasma membrane 24.33 14.92
Solyc04g009130.2.1 Tomato cytosol 23.71 14.86
VIT_15s0046g02750.t01 Wine grape cytosol 28.66 14.85
TraesCS6B01G448100.1 Wheat cytosol 24.12 14.85
TraesCS1B01G336700.1 Wheat cytosol 24.54 14.84
OQU82378 Sorghum nucleus 25.57 14.8
TraesCS2A01G477200.1 Wheat cytosol 20.62 14.79
TraesCS6D01G387500.1 Wheat cytosol, plastid 24.12 14.79
VIT_15s0046g02730.t01 Wine grape cytosol 28.04 14.78
Solyc04g009120.1.1 Tomato cytosol 19.59 14.66
VIT_15s0046g02820.t01 Wine grape cytosol 28.45 14.62
TraesCS7B01G501900.1 Wheat cytosol 26.19 14.58
GSMUA_Achr7P20220_001 Banana cytosol 27.01 14.57
Solyc12g096920.1.1 Tomato extracellular 28.66 14.57
TraesCS7B01G501000.1 Wheat cytosol 26.19 14.53
TraesCS7D01G548100.1 Wheat cytosol 26.6 14.51
HORVU1Hr1G075170.1 Barley cytosol 25.98 14.48
TraesCS1D01G324700.2 Wheat cytosol 25.98 14.48
GSMUA_Achr7P20230_001 Banana cytosol 26.39 14.41
TraesCS7A01G561900.4 Wheat cytosol 27.22 14.38
TraesCS1A01G323600.1 Wheat cytosol 25.77 14.35
VIT_00s0448g00020.t01 Wine grape cytosol 27.84 14.32
TraesCS7B01G500800.1 Wheat cytosol 21.24 14.29
TraesCS7B01G500900.1 Wheat cytosol 25.77 14.29
TraesCS7B01G501100.1 Wheat cytosol 25.57 14.24
Os11t0633500-01 Rice cytosol 15.46 14.2
Os10t0183000-01 Rice plasma membrane 25.98 14.09
TraesCS2A01G459100.1 Wheat plastid 22.89 13.96
TraesCS5A01G261700.1 Wheat cytosol 25.15 13.85
GSMUA_AchrUn_... Banana cytosol 21.24 13.73
TraesCS2B01G536900.1 Wheat cytosol 15.46 13.56
KRG88520 Soybean plastid 9.69 13.54
HORVU5Hr1G072540.26 Barley cytosol 24.54 13.54
VIT_15s0045g00680.t01 Wine grape cytosol 21.44 13.45
TraesCS5A01G261600.1 Wheat cytosol 24.33 13.39
TraesCS2D01G510100.1 Wheat cytosol 13.4 13.35
TraesCS6B01G447800.1 Wheat cytosol 14.64 13.35
TraesCS7A01G562500.1 Wheat cytosol 15.26 13.33
Zm00001d045512_P001 Maize cytosol, mitochondrion 22.47 13.09
TraesCS2B01G507100.1 Wheat cytosol 25.36 12.96
TraesCS2D01G481300.1 Wheat cytosol 25.57 12.96
TraesCS5D01G269100.1 Wheat cytosol 18.35 12.92
TraesCS6B01G448400.1 Wheat cytosol 22.47 12.85
Os03t0709200-01 Rice cytosol 25.36 12.83
TraesCS5B01G259900.1 Wheat cytosol 24.33 12.7
VIT_15s0045g00880.t01 Wine grape cytosol 19.18 12.32
VIT_15s0045g00810.t01 Wine grape cytosol 7.22 8.22
VIT_15s0045g00920.t01 Wine grape cytosol 8.25 7.69
VIT_15s0045g00640.t01 Wine grape cytosol 7.42 7.45
VIT_15s0021g00130.t01 Wine grape cytosol, nucleus, plastid 1.65 2.57
TraesCS7B01G501300.1 Wheat cytosol 0.21 0.36
TraesCS2A01G129300.1 Wheat cytosol 0.0 0.0
TraesCS6B01G448000.1 Wheat cytosol 0.0 0.0
VIT_15s0045g01010.t01 Wine grape cytosol 0.0 0.0
Protein Annotations
Gene3D:3.80.10.10MapMan:35.1GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006950GO:GO:0006952GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0043531InterPro:IPR032675UniProt:K4CC38
InterPro:LRR_dom_sfInterPro:NB-ARCInterPro:P-loop_NTPasePFAM:PF00931PANTHER:PTHR43886PANTHER:PTHR43886:SF17
SUPFAM:SSF52058SUPFAM:SSF52540EnsemblPlantsGene:Solyc07g009190.1EnsemblPlants:Solyc07g009190.1.1UniParc:UPI000276B9D5SEG:seg
Description
No Description!
Coordinates
chr7:-:4243154..4244749
Molecular Weight (calculated)
55954.5 Da
IEP (calculated)
9.683
GRAVY (calculated)
-0.213
Length
485 amino acids
Sequence
(BLAST)
001: MSRTFPDDNN GSRIILTSRL KGVATHAAPD TPPHEDIGKQ VAQKCQGLPL ALLVVAGHLS KIERTQESWK DVDKSVSKVV ANESDKCLGV LAMSYNYLPN
101: HLKPCFLYTG IFPEDSDVNI ERLINLWVSE GFLWEELVGR DYLEDLVSRN LIMVRNRRSN GEWKTCGVHN LVRDLILREA EQKKFLQVTK DLSAKMHHVR
201: RYSFHSNIHQ NDLLESSSID VTRTMHFFRG LGSKQVPLLA CFKLLGVLSV VPYGFEDFPL VITKLVHLTY LQLRLHCWKL GYNSPTIHET VWQMKHSRHL
301: KLRQSISLPK NPSNKLQNLE GLSCLRLSSC TFELFSAIPN LKTLILRGSQ KECQGDQKMF KHLNSLACLK RLEQLKIRCK DLYLFPIPCK YTLPTSLRSL
401: TLSYTYLPWE DMANIVKLPK LEVLKIKNYG FYGDVWRLND GEIFNQLKFL LIRTNDLKQW KAGSVNFPML QRVVLRTCIY LKEIP
Best Arabidopsis Sequence Match ( AT3G46730.1 )
(BLAST)
001: MVDAVTGFVL NKIGGYLINE VLALMGVKDD LEELKTELTC IHGYLKDVEA REREDEVSKE WTKLVLDIAY DIEDVLDTYF LKLEERSLRR GLLRLTNKIG
101: KKRDAYNIVE DIRTLKRRIL DITRKRETFG IGSFNEPRGE NITNVRVRQL RRAPPVDQEE LVVGLEDDVK ILLVKLLSDN EKDKSYIISI FGMGGLGKTA
201: LARKLYNSGD VKRRFDCRAW TYVSQEYKTR DILIRIIRSL GIVSAEEMEK IKMFEEDEEL EVYLYGLLEG KNYMVVVDDV WDPDAWESLK RALPCDHRGS
301: KVIITTRIRA IAEGVEGTVY AHKLRFLTFE ESWTLFERKA FSNIEKVDED LQRTGKEMVK KCGGLPLAIV VLSGLLSRKR TNEWHEVCAS LWRRLKDNSI
401: HISTVFDLSF KEMRHELKLC FLYFSVFPED YEIKVEKLIH LLVAEGFIQE DEEMMMEDVA RCYIDELVDR SLVKAERIER GKVMSCRIHD LLRDLAIKKA
501: KELNFVNVYN EKQHSSDICR REVVHHLMND YYLCDRRVNK RMRSFLFIGE RRGFGYVNTT NLKLKLLRVL NMEGLLFVSK NISNTLPDVI GELIHLRYLG
601: IADTYVSILP ASISNLRFLQ TLDASGNDPF QYTTDLSKLT SLRHVIGKFV GECLIGEGVN LQTLRSISSY SWSKLNHELL RNLQDLEIYD HSKWVDQRRV
701: PLNFVSFSKP KNLRVLKLEM RNFKLSSESR TTIGLVDVNF PSLESLTLVG TTLEENSMPA LQKLPRLEDL VLKDCNYSGV KIMSISAQGF GRLKNLEMSM
801: ERRGHGLDEL RIEEEAMPSL IKLTVKGRLE LTKLMIPDRL KAFVRRN
Arabidopsis Description
RPP13L3Putative disease resistance RPP13-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STE7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.