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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 3
  • cytosol 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400005046 Potato cytosol, extracellular 18.9 73.85
Solyc11g006520.1.1 Tomato cytosol, plastid 76.29 73.78
Solyc11g020100.1.1 Tomato cytosol, plasma membrane 53.4 72.8
PGSC0003DMT400005052 Potato plastid 62.21 71.53
PGSC0003DMT400005032 Potato cytosol 48.47 70.6
PGSC0003DMT400005041 Potato cytosol 50.0 70.3
Solyc12g017810.1.1 Tomato cytosol 17.49 68.04
Solyc11g006630.1.1 Tomato cytosol, plastid 68.43 67.95
Solyc12g017800.1.1 Tomato cytosol 66.78 66.09
Solyc11g006530.1.1 Tomato cytosol, plastid 67.14 66.05
Solyc10g051050.1.1 Tomato cytosol 40.73 62.75
Solyc07g049700.1.1 Tomato cytosol 55.4 55.01
Solyc05g008070.2.1 Tomato mitochondrion 52.11 53.11
Solyc12g010660.1.1 Tomato cytosol 13.15 44.98
Solyc12g006040.1.1 Tomato cytosol 14.79 41.18
Solyc07g009190.1.1 Tomato cytosol 20.89 36.7
Solyc01g087200.2.1 Tomato cytosol 35.33 34.2
Solyc11g069020.1.1 Tomato cytosol 35.33 33.67
Solyc04g011980.1.1 Tomato cytosol 33.8 32.69
Solyc08g074250.1.1 Tomato cytosol 32.75 32.03
Solyc04g011960.1.1 Tomato cytosol 33.33 31.98
Solyc07g009180.1.1 Tomato nucleus 33.8 31.93
Solyc06g062440.2.1 Tomato nucleus 25.35 31.53
Solyc04g012010.2.1 Tomato cytosol 30.63 31.45
Solyc10g008240.2.1 Tomato nucleus 32.16 30.82
Solyc08g005500.2.1 Tomato cytosol 26.29 30.64
Solyc10g008220.2.1 Tomato endoplasmic reticulum 28.99 30.34
Solyc04g011990.1.1 Tomato cytosol 32.04 30.3
Solyc12g009460.1.1 Tomato cytosol 30.52 30.09
Solyc02g027080.1.1 Tomato cytosol, plasma membrane 32.51 29.82
Solyc12g009450.1.1 Tomato mitochondrion 33.8 29.51
Solyc04g026110.2.1 Tomato cytosol 15.02 28.96
Solyc10g008230.1.1 Tomato cytosol 26.64 28.95
VIT_15s0045g00980.t01 Wine grape cytosol 20.07 28.64
Solyc10g047320.1.1 Tomato nucleus 29.34 28.25
VIT_16s0022g01330.t01 Wine grape cytosol 20.77 27.96
Solyc04g015220.2.1 Tomato cytosol 26.17 27.63
Solyc03g005660.2.1 Tomato cytosol 27.82 27.37
Solyc01g090430.2.1 Tomato extracellular 28.4 27.25
TraesCS2D01G510100.1 Wheat cytosol 15.49 27.1
Solyc07g005770.2.1 Tomato cytosol 26.06 26.97
Solyc04g007070.2.1 Tomato nucleus 27.35 26.81
Os11t0633500-01 Rice cytosol 16.55 26.7
TraesCS2D01G510300.1 Wheat cytosol 17.02 26.51
GSMUA_Achr7P20240_001 Banana mitochondrion 21.6 26.32
KRG88520 Soybean plastid 10.68 26.22
TraesCS2B01G536900.1 Wheat cytosol 16.78 25.86
KRG88521 Soybean cytosol 26.06 25.75
GSMUA_AchrUn_... Banana cytosol 8.22 25.55
TraesCS7A01G562500.1 Wheat cytosol 16.55 25.41
Solyc04g007060.2.1 Tomato nucleus 26.17 25.37
KRH17117 Soybean cytosol 26.06 25.31
VIT_15s0046g02800.t01 Wine grape cytosol 20.31 25.22
Solyc04g009120.1.1 Tomato cytosol 19.13 25.15
KRH01534 Soybean cytosol 24.53 25.0
TraesCS2A01G477200.1 Wheat cytosol 19.72 24.85
TraesCS6B01G447800.1 Wheat cytosol 15.49 24.81
GSMUA_Achr7P20220_001 Banana cytosol 26.17 24.81
GSMUA_Achr7P20230_001 Banana cytosol 25.82 24.77
VIT_15s0046g03660.t01 Wine grape cytosol 24.3 24.61
VIT_15s0045g01020.t01 Wine grape cytosol 18.43 24.42
TraesCS2D01G510000.1 Wheat cytosol 22.07 24.42
Solyc04g009150.1.1 Tomato cytosol 24.06 24.29
TraesCS6B01G448300.2 Wheat cytosol, peroxisome, plasma membrane 22.54 24.27
Solyc04g007030.2.1 Tomato endoplasmic reticulum 25.12 24.21
GSMUA_AchrUn_... Banana cytosol 21.24 24.13
Solyc04g007050.2.1 Tomato cytosol 23.12 24.08
KRH45220 Soybean cytosol, extracellular, plastid 25.23 24.05
Solyc04g009690.1.1 Tomato cytosol 23.47 23.98
Solyc04g015210.2.1 Tomato nucleus 25.94 23.97
TraesCS2B01G151600.2 Wheat cytosol 23.83 23.97
TraesCS6A01G404000.1 Wheat cytosol 15.38 23.95
Solyc04g009660.2.1 Tomato cytosol 23.47 23.92
TraesCS7B01G500800.1 Wheat cytosol 20.07 23.72
TraesCS6B01G448100.1 Wheat cytosol 21.83 23.6
Solyc04g009240.1.1 Tomato cytosol 23.36 23.55
TraesCS6A01G403900.1 Wheat plasma membrane, vacuole 20.89 23.51
Solyc04g009250.1.1 Tomato cytosol 23.12 23.45
Solyc04g009260.1.1 Tomato cytosol 23.36 23.44
OQU82378 Sorghum nucleus 23.0 23.39
TraesCS6D01G387500.1 Wheat cytosol, plastid 21.71 23.39
KRH23932 Soybean cytosol 25.47 23.36
KRH01595 Soybean cytosol 24.53 23.33
KRH01598 Soybean cytosol 24.18 23.3
VIT_15s0045g00680.t01 Wine grape cytosol 21.13 23.29
TraesCS7A01G561700.1 Wheat cytosol 23.71 23.27
Solyc04g009110.1.1 Tomato cytosol 23.0 23.25
TraesCS5D01G269100.1 Wheat cytosol 18.78 23.22
VIT_15s0046g02750.t01 Wine grape cytosol 25.47 23.18
VIT_00s0448g00020.t01 Wine grape cytosol 25.59 23.12
TraesCS6D01G387400.1 Wheat cytosol 15.49 23.12
TraesCS7B01G501000.1 Wheat cytosol 23.71 23.11
TraesCS7B01G423500.1 Wheat cytosol 23.47 23.09
TraesCS7B01G500700.1 Wheat cytosol 23.0 23.09
VIT_15s0046g02820.t01 Wine grape cytosol 25.35 22.88
Solyc04g009130.2.1 Tomato cytosol 20.77 22.87
Solyc04g009290.1.1 Tomato cytosol 22.54 22.75
HORVU2Hr1G022620.8 Barley cytosol 23.24 22.73
TraesCS7B01G501100.1 Wheat cytosol 23.24 22.73
VIT_15s0046g02730.t01 Wine grape cytosol 24.53 22.72
TraesCS7A01G561900.4 Wheat cytosol 24.41 22.66
TraesCS7A01G562000.1 Wheat cytosol 23.24 22.63
TraesCS7B01G501900.1 Wheat cytosol 23.12 22.62
HORVU5Hr1G072540.26 Barley cytosol 23.24 22.53
VIT_15s0046g02810.t01 Wine grape cytosol 24.77 22.52
VIT_15s0021g00130.t01 Wine grape cytosol, nucleus, plastid 8.22 22.51
TraesCS6B01G447900.1 Wheat cytosol 19.25 22.37
HORVU1Hr1G075170.1 Barley cytosol 22.65 22.18
TraesCS7B01G500900.1 Wheat cytosol 22.77 22.17
TraesCS7D01G548100.1 Wheat cytosol 23.12 22.16
TraesCS5A01G261700.1 Wheat cytosol 22.89 22.13
TraesCS7B01G501300.1 Wheat cytosol 7.16 22.1
TraesCS7B01G449900.2 Wheat cytosol 22.65 21.81
VIT_15s0045g00920.t01 Wine grape cytosol 13.26 21.73
VIT_15s0045g00880.t01 Wine grape cytosol 19.25 21.72
Os10t0183000-01 Rice plasma membrane 22.77 21.7
TraesCS1B01G336700.1 Wheat cytosol 20.42 21.7
TraesCS5A01G261600.1 Wheat cytosol 22.42 21.68
TraesCS2A01G129300.1 Wheat cytosol 6.34 21.6
Solyc12g096920.1.1 Tomato extracellular 24.18 21.59
TraesCS1D01G324700.2 Wheat cytosol 21.95 21.49
TraesCS1A01G323600.1 Wheat cytosol 21.95 21.47
TraesCS7B01G501200.1 Wheat cytosol 13.85 21.45
TraesCS6B01G448000.1 Wheat cytosol 6.81 21.4
TraesCS6B01G448400.1 Wheat cytosol 20.89 20.99
Os03t0709200-01 Rice cytosol 23.36 20.75
VIT_15s0045g00810.t01 Wine grape cytosol 10.33 20.66
TraesCS2B01G507100.1 Wheat cytosol 22.89 20.55
VIT_15s0045g00640.t01 Wine grape cytosol 11.62 20.5
TraesCS2A01G459100.1 Wheat plastid 19.01 20.38
TraesCS5B01G259900.1 Wheat cytosol 22.18 20.34
TraesCS2B01G507000.1 Wheat cytosol 17.37 20.25
TraesCS2D01G481300.1 Wheat cytosol 22.54 20.06
Zm00001d045512_P001 Maize cytosol, mitochondrion 19.6 20.05
VIT_15s0045g01010.t01 Wine grape cytosol 4.23 18.65
Protein Annotations
Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1ncoils:CoilGO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006950GO:GO:0006952
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0043531
InterPro:IPR032675UniProt:K4D4S5InterPro:LRR_dom_sfInterPro:NB-ARCInterPro:P-loop_NTPasePFAM:PF00931
PRINTS:PR00364PANTHER:PTHR43886PANTHER:PTHR43886:SF17InterPro:RX-like_CCSUPFAM:SSF52047SUPFAM:SSF52540
EnsemblPlantsGene:Solyc11g006640.1EnsemblPlants:Solyc11g006640.1.1UniParc:UPI0002769F44SEG:seg::
Description
No Description!
Coordinates
chr11:+:1242256..1245275
Molecular Weight (calculated)
97829.8 Da
IEP (calculated)
4.935
GRAVY (calculated)
-0.197
Length
852 amino acids
Sequence
(BLAST)
001: MAYAAISSLM YTLEQLFKPN QSFVCPCSTQ QHVENLNQNL SALQDFLDDT TTKDIETLKV VEKRIRDVVY KAEDKVDSSL RSIILADSTE SREGAAKFFE
101: EELVKVEKDV DSLRKEVTVV EFNKHGTKSA ELATTPFSPD QKSTIVENTV VGMKDDFNII LDRLTAQTDE LIVIPILGMG GIGKTTLARK VYDDSCIRSR
201: FDKLAWVTIS QEYNERQMLL EVVSSITTKG SQEMSNDELM EIVYRGLKGR RFLIVIDDIW STEAWNQMQR IFPNDDNKSR ILLTTRLKYV ADYVNCPDFP
301: PHKIGKHIVQ QCQGLPLSIV VVAGLLGKMD LTHDNWKNVE ENLSSFFGTV SERCQSILSL SYNYLPQYLK ACFLYVGGFP EDREINVSQL IRLWIAEQFV
401: KARNNKRLEV VAEEYVQELI DRSLILMDSL TTNGRMKTFK IHDLLRQLCL SETHTENVVH IMNGNVPMFL LEAIDDQRRV ILLSKLEEKQ VYPPMHSNGI
501: TSIARTFISM QYFHYDDFPE GIYSIFSAFK LLKVLDVLTV WYDFSSVIPE LVHLRYVAAG IEEGLSLDKL RNLQTIILHK NIGANRPTKS EQPLDIWRMS
601: ELRHVDIDSP RYISNPLEAE NPLFLNNLQN LYLYNSHFFE EIIKRTPNLK TLKFLDESEH PDWSAILDSL ILLEELEKLV IQLERMNVNI FCGDILYCKI
701: KKLSPNIKKL KLLGTYIPWE VVNLLAYLPN LEVIEGEYAF SGTDWKLDED VVFSKLKYLL IGEADLERWE AAASDNFPML EKLILYGFNK LDEIPESIGD
801: IMTLKLIKID DCSSSVENSA KRIQQEQQSL GNYELQLRIT SKKSATSESS SS
Best Arabidopsis Sequence Match ( AT1G58410.1 )
(BLAST)
001: MELVSFGVEK LWDRLSQEYD QFKGVEDQVT ELKSNLNLLK SFLKDADAKK HISEMVRHCV EEIKDIVYDT EDIIETFILK EKVEMKRGIM KRIKRFASTI
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS
Arabidopsis Description
RXW24LProbable disease resistance protein RXW24L [Source:UniProtKB/Swiss-Prot;Acc:Q9C646]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.