Factsheet for PGSC0003DMT400005046

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

plastid 3
cytosol 3
nucleus 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400019678	Potato	cytosol, extracellular	88.53	60.88
PGSC0003DMT400005732	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	76.61	59.86
PGSC0003DMT400062762	Potato	plastid	73.85	40.66
PGSC0003DMT400005034	Potato	plastid	61.01	32.6
PGSC0003DMT400005011	Potato	cytosol, plastid	79.82	29.39
PGSC0003DMT400046494	Potato	cytosol	35.78	28.47
PGSC0003DMT400062766	Potato	cytosol	69.72	28.25
PGSC0003DMT400068337	Potato	extracellular	29.82	25.29
PGSC0003DMT400005052	Potato	plastid	77.52	22.81
PGSC0003DMT400005006	Potato	vacuole	83.03	20.31
PGSC0003DMT400005013	Potato	plastid	79.82	19.75
PGSC0003DMT400048669	Potato	cytosol	18.81	19.43
Solyc11g006640.1.1	Tomato	cytosol	73.85	18.9
TraesCS2A01G129300.1	Wheat	cytosol	20.64	18.0
TraesCS7B01G501300.1	Wheat	cytosol	22.48	17.75
TraesCS6B01G448000.1	Wheat	cytosol	22.02	17.71
PGSC0003DMT400005017	Potato	cytosol, plastid	71.56	17.67
Solyc11g006520.1.1	Tomato	cytosol, plastid	71.1	17.59
PGSC0003DMT400010987	Potato	cytosol	15.14	17.19
VIT_15s0045g01010.t01	Wine grape	cytosol	15.14	17.1
PGSC0003DMT400002788	Potato	cytosol	54.59	13.98
PGSC0003DMT400078333	Potato	cytosol, vacuole	54.59	13.74
PGSC0003DMT400078334	Potato	cytosol, plastid	57.8	13.7
PGSC0003DMT400025439	Potato	cytosol	33.49	13.27
VIT_15s0021g00130.t01	Wine grape	cytosol, nucleus, plastid	18.35	12.86
PGSC0003DMT400058647	Potato	cytosol, nucleus	33.95	11.9
VIT_15s0045g00810.t01	Wine grape	cytosol	22.48	11.5
TraesCS2D01G510100.1	Wheat	cytosol	24.31	10.88
PGSC0003DMT400059833	Potato	cytosol	21.56	10.76
PGSC0003DMT400025432	Potato	cytosol	33.03	10.56
PGSC0003DMT400062366	Potato	cytosol	17.89	10.46
PGSC0003DMT400019327	Potato	cytosol, extracellular	22.94	10.39
PGSC0003DMT400036104	Potato	extracellular, plasma membrane	16.51	10.37
VIT_15s0045g00920.t01	Wine grape	cytosol	23.85	10.0
VIT_15s0045g00640.t01	Wine grape	cytosol	21.56	9.73
PGSC0003DMT400076082	Potato	cytosol	28.9	9.46
PGSC0003DMT400082452	Potato	cytosol	21.56	9.34
PGSC0003DMT400056268	Potato	cytosol	25.69	9.12
PGSC0003DMT400030826	Potato	cytosol	19.72	9.11
PGSC0003DMT400062272	Potato	cytosol	21.1	9.11
Os11t0633500-01	Rice	cytosol	22.02	9.09
TraesCS2B01G536900.1	Wheat	cytosol	22.94	9.04
VIT_15s0045g00980.t01	Wine grape	cytosol	23.85	8.71
TraesCS7A01G562500.1	Wheat	cytosol	22.02	8.65
PGSC0003DMT400010970	Potato	plasma membrane	32.11	8.5
PGSC0003DMT400036058	Potato	cytosol	29.82	8.47
TraesCS6B01G447800.1	Wheat	cytosol	20.64	8.46
PGSC0003DMT400034063	Potato	cytosol	30.73	8.29
PGSC0003DMT400060798	Potato	cytosol	30.28	8.12
PGSC0003DMT400020353	Potato	cytosol, nucleus, plastid	33.03	7.96
PGSC0003DMT400020342	Potato	cytosol	33.03	7.95
PGSC0003DMT400012486	Potato	cytosol	31.65	7.89
PGSC0003DMT400036070	Potato	cytosol, plastid	33.49	7.88
PGSC0003DMT400005012	Potato	cytosol	12.39	7.8
PGSC0003DMT400082507	Potato	cytosol	12.84	7.71
PGSC0003DMT400062180	Potato	cytosol	29.82	7.71
VIT_15s0046g02800.t01	Wine grape	cytosol	23.39	7.43
PGSC0003DMT400042194	Potato	cytosol	31.65	7.33
PGSC0003DMT400017538	Potato	nucleus	29.82	7.32
PGSC0003DMT400007570	Potato	cytosol	30.28	7.27
PGSC0003DMT400058642	Potato	cytosol	15.14	7.25
TraesCS2A01G477200.1	Wheat	cytosol	22.02	7.1
PGSC0003DMT400050509	Potato	cytosol	28.44	7.08
TraesCS5D01G269100.1	Wheat	cytosol	22.02	6.97
PGSC0003DMT400041023	Potato	cytosol	26.61	6.93
KRG88520	Soybean	plastid	11.01	6.92
TraesCS2D01G510000.1	Wheat	cytosol	24.31	6.88
VIT_15s0045g00680.t01	Wine grape	cytosol	24.31	6.86
PGSC0003DMT400020349	Potato	cytosol	29.82	6.84
PGSC0003DMT400020360	Potato	cytosol	29.82	6.81
TraesCS7B01G500800.1	Wheat	cytosol	22.48	6.8
PGSC0003DMT400056264	Potato	endoplasmic reticulum	27.52	6.76
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	22.94	6.61
PGSC0003DMT400088449	Potato	cytosol	27.52	6.59
VIT_15s0045g00880.t01	Wine grape	cytosol	22.48	6.49
KRH01534	Soybean	cytosol	24.77	6.46
PGSC0003DMT400080647	Potato	cytosol	26.61	6.42
PGSC0003DMT400030022	Potato	cytosol	15.14	6.3
PGSC0003DMT400050826	Potato	cytosol	26.15	6.28
PGSC0003DMT400019301	Potato	cytosol	24.31	6.26
PGSC0003DMT400093366	Potato	cytosol	20.64	6.22
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	22.48	6.19
KRG88521	Soybean	cytosol	24.31	6.15
PGSC0003DMT400047502	Potato	cytosol	26.61	6.1
PGSC0003DMT400075885	Potato	cytosol, plastid	24.77	6.09
OQU82378	Sorghum	nucleus	23.39	6.09
KRH17117	Soybean	cytosol	24.31	6.04
TraesCS7B01G423500.1	Wheat	cytosol	23.85	6.0
PGSC0003DMT400047510	Potato	nucleus	27.98	6.0
GSMUA_AchrUn_...	Banana	cytosol	20.64	6.0
PGSC0003DMT400050821	Potato	cytosol	24.31	6.0
PGSC0003DMT400030030	Potato	nucleus	20.18	5.99
TraesCS1B01G336700.1	Wheat	cytosol	22.02	5.99
TraesCS7D01G548100.1	Wheat	cytosol	24.31	5.96
TraesCS6D01G387500.1	Wheat	cytosol, plastid	21.56	5.94
PGSC0003DMT400019304	Potato	cytosol	23.85	5.92
PGSC0003DMT400082505	Potato	cytosol	11.93	5.9
TraesCS7A01G561700.1	Wheat	cytosol	23.39	5.88
PGSC0003DMT400030034	Potato	cytosol	22.48	5.84
TraesCS6B01G448100.1	Wheat	cytosol	21.1	5.84
VIT_15s0046g03660.t01	Wine grape	cytosol	22.48	5.83
KRH45220	Soybean	cytosol, extracellular, plastid	23.85	5.82
PGSC0003DMT400030019	Potato	cytosol	22.48	5.81
KRH01595	Soybean	cytosol	23.85	5.8
HORVU5Hr1G072540.26	Barley	cytosol	23.39	5.8
TraesCS6B01G448400.1	Wheat	cytosol	22.48	5.78
VIT_15s0046g02750.t01	Wine grape	cytosol	24.77	5.77
PGSC0003DMT400050805	Potato	cytosol	23.39	5.76
PGSC0003DMT400066996	Potato	cytosol	23.39	5.76
HORVU1Hr1G075170.1	Barley	cytosol	22.94	5.75
PGSC0003DMT400021403	Potato	cytosol	24.77	5.68
TraesCS5A01G261700.1	Wheat	cytosol	22.94	5.68
TraesCS7A01G561900.4	Wheat	cytosol	23.85	5.66
VIT_15s0046g02810.t01	Wine grape	cytosol	24.31	5.66
TraesCS7B01G500700.1	Wheat	cytosol	22.02	5.65
VIT_15s0046g02730.t01	Wine grape	cytosol	23.85	5.65
PGSC0003DMT400016707	Potato	cytosol	22.02	5.65
TraesCS1D01G324700.2	Wheat	cytosol	22.48	5.63
TraesCS7B01G501000.1	Wheat	cytosol	22.48	5.61
TraesCS5A01G261600.1	Wheat	cytosol	22.48	5.56
TraesCS2B01G151600.2	Wheat	cytosol	21.56	5.55
TraesCS7B01G449900.2	Wheat	cytosol	22.48	5.54
TraesCS1A01G323600.1	Wheat	cytosol	22.02	5.51
TraesCS7B01G501900.1	Wheat	cytosol	22.02	5.51
KRH01598	Soybean	cytosol	22.02	5.43
VIT_00s0448g00020.t01	Wine grape	cytosol	23.39	5.41
PGSC0003DMT400066993	Potato	cytosol, plasma membrane	22.48	5.37
PGSC0003DMT400030042	Potato	cytosol	21.1	5.35
PGSC0003DMT400062184	Potato	cytosol	21.1	5.3
HORVU2Hr1G022620.8	Barley	cytosol	21.1	5.28
TraesCS7B01G501100.1	Wheat	cytosol	21.1	5.28
TraesCS7B01G500900.1	Wheat	cytosol	21.1	5.26
PGSC0003DMT400030011	Potato	cytosol	20.18	5.23
Os03t0709200-01	Rice	cytosol	22.94	5.21
VIT_15s0046g02820.t01	Wine grape	cytosol	22.48	5.19
PGSC0003DMT400030044	Potato	mitochondrion	20.18	5.17
TraesCS5B01G259900.1	Wheat	cytosol	22.02	5.17
TraesCS2A01G459100.1	Wheat	plastid	18.81	5.16
Os10t0183000-01	Rice	plasma membrane	21.1	5.15
TraesCS7A01G562000.1	Wheat	cytosol	20.64	5.14
PGSC0003DMT400005032	Potato	cytosol	13.76	5.13
GSMUA_AchrUn_...	Banana	cytosol	6.42	5.11
PGSC0003DMT400027529	Potato	cytosol	20.64	5.1
PGSC0003DMT400016712	Potato	cytosol	19.27	5.0
PGSC0003DMT400010966	Potato	cytosol	18.81	4.96
KRH23932	Soybean	cytosol	21.1	4.95
TraesCS2D01G510300.1	Wheat	cytosol	12.39	4.94
GSMUA_Achr7P20220_001	Banana	cytosol	20.18	4.89
PGSC0003DMT400031132	Potato	cytosol	17.43	4.75
GSMUA_Achr7P20230_001	Banana	cytosol	19.27	4.73
PGSC0003DMT400025440	Potato	cytosol, mitochondrion	10.09	4.71
PGSC0003DMT400031142	Potato	cytosol	17.89	4.68
TraesCS6B01G447900.1	Wheat	cytosol	15.6	4.64
PGSC0003DMT400027536	Potato	cytosol	12.84	4.49
PGSC0003DMT400075439	Potato	cytosol	19.27	4.39
TraesCS2B01G507100.1	Wheat	cytosol	18.81	4.32
PGSC0003DMT400031116	Potato	cytosol	15.14	4.24
TraesCS2D01G481300.1	Wheat	cytosol	17.89	4.08
PGSC0003DMT400019329	Potato	cytosol	11.93	3.54
PGSC0003DMT400019300	Potato	cytosol, plasma membrane, plastid	11.01	3.52
Zm00001d045512_P001	Maize	cytosol, mitochondrion	11.01	2.88
VIT_16s0022g01330.t01	Wine grape	cytosol	7.8	2.69
PGSC0003DMT400012121	Potato	extracellular, golgi	4.59	1.83
PGSC0003DMT400012479	Potato	cytosol	3.67	1.22
PGSC0003DMT400030031	Potato	cytosol	1.38	0.93
GSMUA_Achr7P20240_001	Banana	mitochondrion	2.75	0.86
PGSC0003DMT400047508	Potato	cytosol	1.38	0.75
PGSC0003DMT400005041	Potato	cytosol	1.83	0.66
PGSC0003DMT400030040	Potato	cytosol	1.38	0.49
VIT_15s0045g01020.t01	Wine grape	cytosol	1.38	0.47
PGSC0003DMT400020346	Potato	cytosol	0.92	0.45
TraesCS2B01G507000.1	Wheat	cytosol	1.38	0.41
PGSC0003DMT400019683	Potato	cytosol, mitochondrion	0.92	0.4
PGSC0003DMT400005733	Potato	cytosol	0.92	0.38
PGSC0003DMT400005040	Potato	cytosol, nucleus, peroxisome	0.92	0.35
PGSC0003DMT400046497	Potato	cytosol	0.46	0.31
PGSC0003DMT400020350	Potato	cytosol, nucleus, plasma membrane	0.92	0.23
PGSC0003DMT400056267	Potato	cytosol	0.46	0.22
PGSC0003DMT400051415	Potato	cytosol	0.46	0.21
TraesCS6A01G404000.1	Wheat	cytosol	0.46	0.18
PGSC0003DMT400069012	Potato	cytosol	0.46	0.18
TraesCS6D01G387400.1	Wheat	cytosol	0.46	0.18
PGSC0003DMT400031120	Potato	cytosol	0.0	0.0
PGSC0003DMT400059836	Potato	cytosol	0.0	0.0
PGSC0003DMT400078332	Potato	cytosol	0.0	0.0
PGSC0003DMT400094032	Potato	cytosol	0.0	0.0
TraesCS7B01G501200.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400005046	EnsemblPlantsGene:PGSC0003DMG400001994	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR43886	PANTHER:PTHR43886:SF17
PFAM:PF00931	PGSC:PGSC0003DMG400001994	SUPFAM:SSF52540	UniParc:UPI000296A400	UniProt:M0ZPE2	MapMan:35.2

Description

NBS-LRR protein [Source:PGSC_GENE;Acc:PGSC0003DMG400001994]

Coordinates

chr11:-:5910140..5910879

Molecular Weight (calculated)

24886.7 Da

IEP (calculated)

5.730

GRAVY (calculated)

-0.341

Length

218 amino acids

Sequence
(BLAST)

001: MAYAAISSLM YTLNQLLKPN QSFVCPCCTQ QHLESLCQNL SALQDFLDDT TTKDIETLKV VEKRIRNVVY KAEDRIDSSL RSIILADHEV NRQKACKSFY
101: EELLKVEQQV YFLNKEVMLI EFNNHGSKSA ELARISSSLE KSTIEENSFV GMEDDFNIIL DRVTTQTDEL TVIPIFGMGG IGKTTLARKV YDDSYIRSRF
201: DNKHGSLSLK NTMRDKCS

Best Arabidopsis Sequence Match ( AT3G46730.1 )
(BLAST)

001: MVDAVTGFVL NKIGGYLINE VLALMGVKDD LEELKTELTC IHGYLKDVEA REREDEVSKE WTKLVLDIAY DIEDVLDTYF LKLEERSLRR GLLRLTNKIG
101: KKRDAYNIVE DIRTLKRRIL DITRKRETFG IGSFNEPRGE NITNVRVRQL RRAPPVDQEE LVVGLEDDVK ILLVKLLSDN EKDKSYIISI FGMGGLGKTA
201: LARKLYNSGD VKRRFDCRAW TYVSQEYKTR DILIRIIRSL GIVSAEEMEK IKMFEEDEEL EVYLYGLLEG KNYMVVVDDV WDPDAWESLK RALPCDHRGS
301: KVIITTRIRA IAEGVEGTVY AHKLRFLTFE ESWTLFERKA FSNIEKVDED LQRTGKEMVK KCGGLPLAIV VLSGLLSRKR TNEWHEVCAS LWRRLKDNSI
401: HISTVFDLSF KEMRHELKLC FLYFSVFPED YEIKVEKLIH LLVAEGFIQE DEEMMMEDVA RCYIDELVDR SLVKAERIER GKVMSCRIHD LLRDLAIKKA
501: KELNFVNVYN EKQHSSDICR REVVHHLMND YYLCDRRVNK RMRSFLFIGE RRGFGYVNTT NLKLKLLRVL NMEGLLFVSK NISNTLPDVI GELIHLRYLG
601: IADTYVSILP ASISNLRFLQ TLDASGNDPF QYTTDLSKLT SLRHVIGKFV GECLIGEGVN LQTLRSISSY SWSKLNHELL RNLQDLEIYD HSKWVDQRRV
701: PLNFVSFSKP KNLRVLKLEM RNFKLSSESR TTIGLVDVNF PSLESLTLVG TTLEENSMPA LQKLPRLEDL VLKDCNYSGV KIMSISAQGF GRLKNLEMSM
801: ERRGHGLDEL RIEEEAMPSL IKLTVKGRLE LTKLMIPDRL KAFVRRN

Arabidopsis Description

RPP13L3Putative disease resistance RPP13-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STE7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.