Factsheet for PGSC0003DMT400030044

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

mitochondrion: 24351685

msms PMID: 24351685 doi

F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller

Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400030030	Potato	nucleus	65.1	75.37
PGSC0003DMT400062272	Potato	cytosol	44.54	75.05
PGSC0003DMT400059833	Potato	cytosol	38.19	74.37
PGSC0003DMT400082507	Potato	cytosol	31.61	74.1
PGSC0003DMT400082505	Potato	cytosol	38.07	73.47
PGSC0003DMT400031142	Potato	cytosol	71.45	72.9
PGSC0003DMT400030040	Potato	cytosol	51.35	71.88
PGSC0003DMT400030034	Potato	cytosol	70.86	71.87
PGSC0003DMT400031116	Potato	cytosol	65.69	71.76
PGSC0003DMT400030031	Potato	cytosol	27.03	71.65
PGSC0003DMT400016712	Potato	cytosol	70.39	71.31
PGSC0003DMT400082452	Potato	cytosol	42.07	71.17
PGSC0003DMT400016707	Potato	cytosol	70.51	70.59
PGSC0003DMT400030042	Potato	cytosol	71.33	70.58
PGSC0003DMT400059836	Potato	cytosol	32.2	70.08
PGSC0003DMT400030019	Potato	cytosol	69.21	69.79
PGSC0003DMT400030011	Potato	cytosol	68.16	68.88
PGSC0003DMT400031132	Potato	cytosol	64.04	68.12
PGSC0003DMT400031120	Potato	cytosol	23.97	66.67
PGSC0003DMT400030022	Potato	cytosol	37.02	60.11
PGSC0003DMT400027529	Potato	cytosol	54.76	52.77
PGSC0003DMT400027536	Potato	cytosol	26.67	36.38
CDX82995	Canola	cytosol	13.16	35.9
AT3G46730.1	Thale cress	cytosol	33.49	33.65
PGSC0003DMT400005012	Potato	cytosol	13.16	32.37
Bra037123.1-P	Field mustard	cytosol	30.43	32.21
AT3G46530.1	Thale cress	nucleus	31.37	31.98
PGSC0003DMT400062366	Potato	cytosol	13.98	31.9
CDX68399	Canola	cytosol	8.11	31.65
AT3G46710.1	Thale cress	cytosol	31.14	31.29
PGSC0003DMT400048669	Potato	cytosol	7.76	31.28
PGSC0003DMT400010987	Potato	cytosol	7.05	31.25
CDX82996	Canola	cytosol	13.75	31.03
CDY18642	Canola	cytosol, nucleus, peroxisome	13.4	30.89
PGSC0003DMT400025440	Potato	cytosol, mitochondrion	16.69	30.41
PGSC0003DMT400036104	Potato	extracellular, plasma membrane	12.22	29.97
GSMUA_AchrUn_...	Banana	cytosol	9.64	29.93
CDX81333	Canola	nucleus	18.68	29.23
TraesCS2D01G510300.1	Wheat	cytosol	18.57	28.88
PGSC0003DMT400046494	Potato	cytosol	9.28	28.83
PGSC0003DMT400075439	Potato	cytosol	32.2	28.66
TraesCS7A01G562500.1	Wheat	cytosol	18.68	28.65
PGSC0003DMT400025439	Potato	cytosol	18.45	28.55
TraesCS2D01G510100.1	Wheat	cytosol	16.22	28.34
CDX82994	Canola	nucleus	14.92	28.16
GSMUA_Achr7P20240_001	Banana	mitochondrion	22.8	27.75
GSMUA_Achr7P20230_001	Banana	cytosol	28.91	27.7
TraesCS2A01G477200.1	Wheat	cytosol	21.86	27.51
TraesCS2B01G536900.1	Wheat	cytosol	17.86	27.49
Os11t0633500-01	Rice	cytosol	17.04	27.46
TraesCS6B01G447800.1	Wheat	cytosol	17.04	27.26
GSMUA_Achr7P20220_001	Banana	cytosol	28.67	27.14
PGSC0003DMT400056264	Potato	endoplasmic reticulum	28.08	26.94
TraesCS7B01G423500.1	Wheat	cytosol	27.38	26.91
PGSC0003DMT400047508	Potato	cytosol	12.57	26.82
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	23.85	26.82
TraesCS1B01G336700.1	Wheat	cytosol	25.03	26.56
TraesCS2D01G510000.1	Wheat	cytosol	23.97	26.49
GSMUA_AchrUn_...	Banana	cytosol	23.27	26.4
PGSC0003DMT400056268	Potato	cytosol	19.04	26.38
TraesCS7B01G500800.1	Wheat	cytosol	22.33	26.35
CDX68397	Canola	cytosol	7.64	26.32
PGSC0003DMT400056267	Potato	cytosol	14.1	26.32
TraesCS1D01G324700.2	Wheat	cytosol	26.79	26.21
TraesCS6A01G404000.1	Wheat	cytosol	16.8	26.14
PGSC0003DMT400021403	Potato	cytosol	29.14	26.11
TraesCS6D01G387400.1	Wheat	cytosol	17.51	26.09
TraesCS7A01G562000.1	Wheat	cytosol	26.79	26.06
PGSC0003DMT400012121	Potato	extracellular, golgi	16.69	26.05
PGSC0003DMT400051415	Potato	cytosol	14.81	26.03
TraesCS7B01G500700.1	Wheat	cytosol	25.97	26.03
PGSC0003DMT400005011	Potato	cytosol, plastid	18.1	26.01
TraesCS7D01G548100.1	Wheat	cytosol	27.14	25.98
PGSC0003DMT400005034	Potato	plastid	12.46	25.98
TraesCS7B01G501900.1	Wheat	cytosol	26.56	25.95
TraesCS2B01G151600.2	Wheat	cytosol	25.73	25.86
TraesCS6B01G447900.1	Wheat	cytosol	22.21	25.78
TraesCS6B01G448100.1	Wheat	cytosol	23.74	25.63
TraesCS1A01G323600.1	Wheat	cytosol	26.2	25.6
TraesCS7B01G501100.1	Wheat	cytosol	26.2	25.6
TraesCS7B01G500900.1	Wheat	cytosol	26.32	25.6
TraesCS7A01G561700.1	Wheat	cytosol	26.09	25.58
TraesCS7B01G501000.1	Wheat	cytosol	26.2	25.51
PGSC0003DMT400066996	Potato	cytosol	26.56	25.51
TraesCS7A01G561900.4	Wheat	cytosol	27.5	25.49
TraesCS7B01G501200.1	Wheat	cytosol	16.45	25.45
TraesCS6D01G387500.1	Wheat	cytosol, plastid	23.62	25.41
HORVU1Hr1G075170.1	Barley	cytosol	25.97	25.4
PGSC0003DMT400010966	Potato	cytosol	24.68	25.39
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	23.5	25.28
PGSC0003DMT400020346	Potato	cytosol	13.04	25.17
PGSC0003DMT400050509	Potato	cytosol	25.85	25.11
TraesCS5D01G269100.1	Wheat	cytosol	20.33	25.11
PGSC0003DMT400020342	Potato	cytosol	26.56	24.94
HORVU2Hr1G022620.8	Barley	cytosol	25.5	24.91
PGSC0003DMT400046497	Potato	cytosol	9.52	24.85
PGSC0003DMT400062762	Potato	plastid	11.52	24.75
PGSC0003DMT400005732	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	8.11	24.73
OQU82378	Sorghum	nucleus	24.32	24.7
PGSC0003DMT400020353	Potato	cytosol, nucleus, plastid	26.09	24.56
PGSC0003DMT400080647	Potato	cytosol	25.97	24.47
PGSC0003DMT400088449	Potato	cytosol	26.09	24.4
PGSC0003DMT400066993	Potato	cytosol, plasma membrane	26.09	24.34
PGSC0003DMT400025432	Potato	cytosol	19.51	24.34
PGSC0003DMT400005032	Potato	cytosol	16.69	24.27
PGSC0003DMT400019329	Potato	cytosol	20.8	24.11
PGSC0003DMT400060798	Potato	cytosol	23.03	24.11
PGSC0003DMT400017538	Potato	nucleus	25.15	24.1
PGSC0003DMT400012479	Potato	cytosol	18.57	24.01
TraesCS5A01G261700.1	Wheat	cytosol	24.79	23.95
PGSC0003DMT400005041	Potato	cytosol	16.92	23.76
PGSC0003DMT400036070	Potato	cytosol, plastid	25.85	23.76
PGSC0003DMT400093366	Potato	cytosol	20.21	23.76
PGSC0003DMT400002788	Potato	cytosol	23.74	23.74
PGSC0003DMT400007570	Potato	cytosol	25.26	23.68
TraesCS2A01G459100.1	Wheat	plastid	22.09	23.65
PGSC0003DMT400012486	Potato	cytosol	24.21	23.57
TraesCS6B01G448400.1	Wheat	cytosol	23.38	23.47
TraesCS2B01G507100.1	Wheat	cytosol	26.09	23.39
TraesCS7B01G449900.2	Wheat	cytosol	24.09	23.16
TraesCS5A01G261600.1	Wheat	cytosol	23.97	23.16
PGSC0003DMT400078333	Potato	cytosol, vacuole	23.5	23.09
HORVU5Hr1G072540.26	Barley	cytosol	23.85	23.09
PGSC0003DMT400019327	Potato	cytosol, extracellular	13.04	23.08
PGSC0003DMT400058642	Potato	cytosol	12.34	23.08
PGSC0003DMT400062180	Potato	cytosol	22.8	23.01
PGSC0003DMT400005017	Potato	cytosol, plastid	23.85	22.99
TraesCS2D01G481300.1	Wheat	cytosol	25.85	22.99
PGSC0003DMT400062184	Potato	cytosol	23.38	22.93
PGSC0003DMT400034063	Potato	cytosol	21.74	22.9
PGSC0003DMT400005040	Potato	cytosol, nucleus, peroxisome	15.39	22.86
TraesCS2B01G507000.1	Wheat	cytosol	19.62	22.85
PGSC0003DMT400075885	Potato	cytosol, plastid	23.74	22.77
PGSC0003DMT400069012	Potato	cytosol	14.92	22.72
PGSC0003DMT400005013	Potato	plastid	23.5	22.7
PGSC0003DMT400010970	Potato	plasma membrane	21.86	22.57
TraesCS6B01G448000.1	Wheat	cytosol	7.17	22.51
PGSC0003DMT400062766	Potato	cytosol	14.22	22.49
PGSC0003DMT400019300	Potato	cytosol, plasma membrane, plastid	17.98	22.47
PGSC0003DMT400050826	Potato	cytosol	23.97	22.47
PGSC0003DMT400041023	Potato	cytosol	22.09	22.46
TraesCS2A01G129300.1	Wheat	cytosol	6.58	22.4
PGSC0003DMT400078334	Potato	cytosol, plastid	24.21	22.39
PGSC0003DMT400076082	Potato	cytosol	17.51	22.37
Os03t0709200-01	Rice	cytosol	25.15	22.31
Os10t0183000-01	Rice	plasma membrane	23.38	22.26
PGSC0003DMT400020349	Potato	cytosol	24.79	22.21
PGSC0003DMT400042194	Potato	cytosol	24.56	22.21
PGSC0003DMT400058647	Potato	cytosol, nucleus	16.22	22.19
PGSC0003DMT400019304	Potato	cytosol	22.91	22.18
PGSC0003DMT400047502	Potato	cytosol	24.68	22.08
TraesCS5B01G259900.1	Wheat	cytosol	24.09	22.07
PGSC0003DMT400020360	Potato	cytosol	24.68	22.01
TraesCS7B01G501300.1	Wheat	cytosol	7.05	21.74
PGSC0003DMT400050805	Potato	cytosol	22.44	21.58
PGSC0003DMT400005052	Potato	plastid	18.68	21.46
PGSC0003DMT400050821	Potato	cytosol	22.21	21.38
Zm00001d045512_P001	Maize	cytosol, mitochondrion	20.8	21.25
PGSC0003DMT400019683	Potato	cytosol, mitochondrion	12.22	21.05
PGSC0003DMT400019301	Potato	cytosol	20.92	21.02
PGSC0003DMT400068337	Potato	extracellular	6.35	21.01
PGSC0003DMT400005006	Potato	vacuole	21.97	20.99
PGSC0003DMT400047510	Potato	nucleus	24.21	20.28
PGSC0003DMT400005046	Potato	cytosol, extracellular	5.17	20.18
PGSC0003DMT400005733	Potato	cytosol	12.46	20.15
PGSC0003DMT400036058	Potato	cytosol	17.86	19.82
PGSC0003DMT400078332	Potato	cytosol	10.22	19.12
PGSC0003DMT400019678	Potato	cytosol, extracellular	7.05	18.93
PGSC0003DMT400030826	Potato	cytosol	9.75	17.58
PGSC0003DMT400094032	Potato	cytosol	7.87	17.14
PGSC0003DMT400020350	Potato	cytosol, nucleus, plasma membrane	16.92	16.49

Protein Annotations

EntrezGene:102584674	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0043531
InterPro:IPR032675	InterPro:LRR_dom_sf	UniProt:M1ATQ5	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931
EnsemblPlantsGene:PGSC0003DMG400011528	PGSC:PGSC0003DMG400011528	EnsemblPlants:PGSC0003DMT400030044	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF7
InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI0002948162	RefSeq:XP_006359359.1	SEG:seg

Description

R2 [Source:PGSC_GENE;Acc:PGSC0003DMG400011528]

Coordinates

chr4:+:4632843..4635398

Molecular Weight (calculated)

97894.2 Da

IEP (calculated)

7.136

GRAVY (calculated)

-0.103

Length

851 amino acids

Sequence
(BLAST)

001: MADAFVSFAV QKLSDFLSSQ VSLRTNLREE VEWLIKELHI IKSYLGDAEQ KQTGDNRVQQ WLFEINSIAN DAVAILETYS FEAGKHASCL KACACICRKE
101: KKFYNVLEEI QSLKQRIIDV SGKQENYGIT NINYNAGEGP SNQVTTLRRT TSHVDDQNYV FVGLQDVVEK LLDELLRAEA RPSVISICGM GGLGKTTLAR
201: NLYINPNIVN SFHMRAWICA PEEYNTVDVL KNIIKSIQSC SKEILDWLER MTERDLAIYL RALLKKRKYL VVVDDLWHRE AWESLKKAFR DGKKGSRVII
301: TTRRVDIAKT ADEGFVHNLR FLSQDESWDL FCRKQLHVQA MVPKMERLAR DMVEKCGGLP LSIVVLSGLL SHKRGLDEWQ KVKDHLWENI IEDECIEIPN
401: ILSLSYNDLS IALKQCFLYF GIFPKDQVVE AENIIRLWMA EGFIPRGEER MEDVAEGFLN ELKRRSLVQV VDTFWEKVEV CSVHDLLHDL AIHKALKVNF
501: FDIYDPINHS ISSSCIRHGI HSQEKRYLSL DLSNLKLRSI MFFNLGFRNM SHINFSSVFQ HVYVLYMDII DGTLPDAVGS LYHLKFLRLT GVIHDLPSSI
601: GSLKNLQTLC VKCNFKQFCQ LPPETADLIN LRYLGVPYSE PLNRIRKLTS LQALEGVSCD QWKDVDPVDL VNLQELSMIS ITKSYSLNKI SNLKNLSTLK
701: LLCYADESFP SLEFLISCHN LKKLLLEGRI EKLPLFPNSI TMLTLVDSKL MEDPMFILGM LPNLRNLCLF RAYQGKEIIC SDNSFSQLKF LSLDCLWNLE
801: RWNLATSAMP LIKALRIDRC LKLNQIPERM KDVEPLPIEE KLNALKLFNH M

Best Arabidopsis Sequence Match ( AT3G46530.1 )
(BLAST)

001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC

Arabidopsis Description

RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.