Factsheet for PGSC0003DMT400093366

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g074250.1.1	Tomato	cytosol	85.22	70.84
PGSC0003DMT400076082	Potato	cytosol	63.54	69.07
PGSC0003DMT400042194	Potato	cytosol	71.82	55.26
PGSC0003DMT400060798	Potato	cytosol	60.91	54.24
PGSC0003DMT400034063	Potato	cytosol	56.22	50.37
PGSC0003DMT400012479	Potato	cytosol	36.74	40.43
PGSC0003DMT400010987	Potato	cytosol	10.5	39.58
PGSC0003DMT400062184	Potato	cytosol	43.92	36.64
PGSC0003DMT400012486	Potato	cytosol	44.2	36.61
PGSC0003DMT400062180	Potato	cytosol	42.27	36.3
PGSC0003DMT400062366	Potato	cytosol	18.65	36.19
PGSC0003DMT400005012	Potato	cytosol	16.57	34.68
PGSC0003DMT400017538	Potato	nucleus	42.13	34.35
PGSC0003DMT400019683	Potato	cytosol, mitochondrion	22.51	33.0
PGSC0003DMT400005032	Potato	cytosol	26.52	32.82
PGSC0003DMT400036104	Potato	extracellular, plasma membrane	15.47	32.28
PGSC0003DMT400046497	Potato	cytosol	14.5	32.21
PGSC0003DMT400025440	Potato	cytosol, mitochondrion	20.03	31.05
PGSC0003DMT400005733	Potato	cytosol	22.51	30.99
PGSC0003DMT400005041	Potato	cytosol	25.69	30.69
PGSC0003DMT400012121	Potato	extracellular, golgi	23.07	30.64
PGSC0003DMT400078332	Potato	cytosol	19.06	30.33
PGSC0003DMT400005040	Potato	cytosol, nucleus, peroxisome	23.89	30.19
PGSC0003DMT400051415	Potato	cytosol	20.03	29.96
PGSC0003DMT400046494	Potato	cytosol	11.33	29.93
PGSC0003DMT400094032	Potato	cytosol	16.16	29.92
PGSC0003DMT400005052	Potato	plastid	30.52	29.82
PGSC0003DMT400010966	Potato	cytosol	33.56	29.38
PGSC0003DMT400005013	Potato	plastid	35.22	28.94
PGSC0003DMT400050509	Potato	cytosol	34.81	28.77
PGSC0003DMT400036070	Potato	cytosol, plastid	36.74	28.73
PGSC0003DMT400048669	Potato	cytosol	8.29	28.44
PGSC0003DMT400047508	Potato	cytosol	15.61	28.32
PGSC0003DMT400005017	Potato	cytosol, plastid	34.39	28.2
PGSC0003DMT400007570	Potato	cytosol	34.94	27.86
PGSC0003DMT400025432	Potato	cytosol	26.24	27.86
PGSC0003DMT400002788	Potato	cytosol	32.46	27.61
PGSC0003DMT400020353	Potato	cytosol, nucleus, plastid	34.25	27.43
PGSC0003DMT400020342	Potato	cytosol	34.25	27.37
PGSC0003DMT400005011	Potato	cytosol, plastid	22.38	27.36
PGSC0003DMT400056264	Potato	endoplasmic reticulum	33.29	27.17
PGSC0003DMT400005006	Potato	vacuole	33.29	27.05
PGSC0003DMT400078333	Potato	cytosol, vacuole	32.04	26.79
PGSC0003DMT400025439	Potato	cytosol	20.3	26.73
PGSC0003DMT400019329	Potato	cytosol	27.07	26.7
PGSC0003DMT400078334	Potato	cytosol, plastid	33.84	26.63
PGSC0003DMT400050805	Potato	cytosol	32.46	26.55
PGSC0003DMT400069012	Potato	cytosol	20.44	26.48
PGSC0003DMT400050821	Potato	cytosol	32.32	26.47
PGSC0003DMT400010970	Potato	plasma membrane	29.97	26.34
PGSC0003DMT400056267	Potato	cytosol	16.57	26.32
PGSC0003DMT400082507	Potato	cytosol	13.12	26.17
VIT_16s0022g01330.t01	Wine grape	cytosol	22.79	26.07
PGSC0003DMT400020349	Potato	cytosol	34.12	26.0
PGSC0003DMT400020360	Potato	cytosol	34.12	25.89
PGSC0003DMT400080647	Potato	cytosol	31.91	25.58
PGSC0003DMT400056268	Potato	cytosol	21.69	25.57
TraesCS2D01G510300.1	Wheat	cytosol	19.2	25.41
PGSC0003DMT400020346	Potato	cytosol	15.47	25.4
PGSC0003DMT400047502	Potato	cytosol	33.29	25.34
PGSC0003DMT400066996	Potato	cytosol	30.52	24.94
PGSC0003DMT400062766	Potato	cytosol	18.23	24.54
PGSC0003DMT400088449	Potato	cytosol	30.66	24.4
PGSC0003DMT400066993	Potato	cytosol, plasma membrane	30.66	24.34
PGSC0003DMT400030826	Potato	cytosol	15.75	24.15
PGSC0003DMT400068337	Potato	extracellular	8.56	24.12
PGSC0003DMT400030040	Potato	cytosol	20.03	23.85
GSMUA_AchrUn_...	Banana	cytosol	8.98	23.72
PGSC0003DMT400047510	Potato	nucleus	33.29	23.72
TraesCS6D01G387400.1	Wheat	cytosol	18.37	23.29
PGSC0003DMT400005034	Potato	plastid	13.12	23.28
PGSC0003DMT400030031	Potato	cytosol	10.22	23.05
VIT_15s0045g01020.t01	Wine grape	cytosol	20.3	22.86
TraesCS6B01G447900.1	Wheat	cytosol	23.07	22.78
PGSC0003DMT400031116	Potato	cytosol	24.45	22.72
PGSC0003DMT400041023	Potato	cytosol	26.24	22.7
GSMUA_Achr7P20240_001	Banana	mitochondrion	21.82	22.6
PGSC0003DMT400005732	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	8.7	22.58
KRH17117	Soybean	cytosol	27.35	22.58
PGSC0003DMT400019300	Potato	cytosol, plasma membrane, plastid	21.13	22.47
KRG88521	Soybean	cytosol	26.66	22.39
PGSC0003DMT400075885	Potato	cytosol, plastid	27.35	22.32
PGSC0003DMT400059836	Potato	cytosol	12.02	22.25
PGSC0003DMT400031120	Potato	cytosol	9.39	22.22
TraesCS6A01G404000.1	Wheat	cytosol	16.57	21.94
PGSC0003DMT400050826	Potato	cytosol	27.49	21.92
TraesCS6A01G403900.1	Wheat	plasma membrane, vacuole	22.79	21.8
PGSC0003DMT400062762	Potato	plastid	11.88	21.72
PGSC0003DMT400019304	Potato	cytosol	26.24	21.62
PGSC0003DMT400030019	Potato	cytosol	25.0	21.45
KRH01595	Soybean	cytosol	26.52	21.43
KRH45220	Soybean	cytosol, extracellular, plastid	26.38	21.36
KRH01534	Soybean	cytosol	24.59	21.29
KRH01598	Soybean	cytosol	25.97	21.27
TraesCS6B01G448100.1	Wheat	cytosol	23.07	21.19
TraesCS2D01G510000.1	Wheat	cytosol	22.51	21.17
TraesCS2A01G477200.1	Wheat	cytosol	19.75	21.15
KRG88520	Soybean	plastid	10.08	21.04
TraesCS6B01G448300.2	Wheat	cytosol, peroxisome, plasma membrane	22.93	20.99
PGSC0003DMT400016712	Potato	cytosol	24.31	20.95
PGSC0003DMT400030011	Potato	cytosol	24.31	20.9
PGSC0003DMT400030034	Potato	cytosol	24.03	20.74
TraesCS6D01G387500.1	Wheat	cytosol, plastid	22.65	20.73
VIT_15s0046g02800.t01	Wine grape	cytosol	19.61	20.7
TraesCS7A01G562000.1	Wheat	cytosol	25.0	20.69
TraesCS7B01G501900.1	Wheat	cytosol	24.86	20.67
PGSC0003DMT400005046	Potato	cytosol, extracellular	6.22	20.64
PGSC0003DMT400031132	Potato	cytosol	22.79	20.62
TraesCS7A01G561700.1	Wheat	cytosol	24.72	20.62
PGSC0003DMT400027529	Potato	cytosol	25.14	20.61
PGSC0003DMT400030042	Potato	cytosol	24.45	20.58
OQU82378	Sorghum	nucleus	23.76	20.53
TraesCS7B01G500700.1	Wheat	cytosol	24.03	20.49
PGSC0003DMT400082452	Potato	cytosol	14.23	20.48
PGSC0003DMT400016707	Potato	cytosol	24.03	20.47
TraesCS7B01G500900.1	Wheat	cytosol	24.72	20.46
TraesCS7B01G501000.1	Wheat	cytosol	24.59	20.37
KRH23932	Soybean	cytosol	26.11	20.34
TraesCS7B01G501100.1	Wheat	cytosol	24.45	20.32
TraesCS2B01G151600.2	Wheat	cytosol	23.76	20.31
VIT_15s0045g00980.t01	Wine grape	cytosol	16.71	20.27
Os11t0633500-01	Rice	cytosol	14.78	20.27
PGSC0003DMT400031142	Potato	cytosol	23.34	20.26
TraesCS7B01G500800.1	Wheat	cytosol	20.17	20.25
PGSC0003DMT400030044	Potato	mitochondrion	23.76	20.21
PGSC0003DMT400019678	Potato	cytosol, extracellular	8.84	20.19
GSMUA_Achr7P20230_001	Banana	cytosol	24.72	20.16
TraesCS6B01G447800.1	Wheat	cytosol	14.78	20.11
TraesCS2B01G536900.1	Wheat	cytosol	15.33	20.07
PGSC0003DMT400030030	Potato	nucleus	20.3	20.0
PGSC0003DMT400058642	Potato	cytosol	12.57	20.0
PGSC0003DMT400062272	Potato	cytosol	13.95	20.0
TraesCS7A01G562500.1	Wheat	cytosol	15.33	20.0
TraesCS7B01G423500.1	Wheat	cytosol	23.89	19.98
PGSC0003DMT400036058	Potato	cytosol	21.13	19.95
PGSC0003DMT400058647	Potato	cytosol, nucleus	17.13	19.94
TraesCS2D01G510100.1	Wheat	cytosol	13.4	19.92
TraesCS7D01G548100.1	Wheat	cytosol	24.45	19.91
VIT_15s0046g02730.t01	Wine grape	cytosol	25.28	19.89
HORVU1Hr1G075170.1	Barley	cytosol	23.89	19.89
TraesCS7A01G561900.4	Wheat	cytosol	25.14	19.83
TraesCS1A01G323600.1	Wheat	cytosol	23.76	19.75
GSMUA_Achr7P20220_001	Banana	cytosol	24.45	19.69
PGSC0003DMT400075439	Potato	cytosol	25.97	19.67
GSMUA_AchrUn_...	Banana	cytosol	20.3	19.6
TraesCS1D01G324700.2	Wheat	cytosol	23.48	19.54
VIT_15s0046g02810.t01	Wine grape	cytosol	25.28	19.53
HORVU2Hr1G022620.8	Barley	cytosol	23.48	19.52
VIT_15s0046g03660.t01	Wine grape	cytosol	22.51	19.38
VIT_15s0046g02750.t01	Wine grape	cytosol	25.0	19.34
TraesCS7B01G449900.2	Wheat	cytosol	23.62	19.32
TraesCS7B01G501200.1	Wheat	cytosol	14.64	19.27
TraesCS1B01G336700.1	Wheat	cytosol	21.27	19.2
TraesCS6B01G448400.1	Wheat	cytosol	22.38	19.1
PGSC0003DMT400019301	Potato	cytosol	22.24	19.01
VIT_00s0448g00020.t01	Wine grape	cytosol	24.72	18.98
PGSC0003DMT400020350	Potato	cytosol, nucleus, plasma membrane	22.65	18.79
VIT_15s0046g02820.t01	Wine grape	cytosol	24.31	18.64
Os10t0183000-01	Rice	plasma membrane	22.93	18.57
TraesCS5D01G269100.1	Wheat	cytosol	17.4	18.29
TraesCS5A01G261600.1	Wheat	cytosol	22.24	18.27
VIT_15s0045g00680.t01	Wine grape	cytosol	19.48	18.24
TraesCS2B01G507000.1	Wheat	cytosol	18.37	18.19
PGSC0003DMT400082505	Potato	cytosol	11.05	18.14
PGSC0003DMT400019327	Potato	cytosol, extracellular	12.02	18.09
PGSC0003DMT400059833	Potato	cytosol	10.91	18.08
VIT_15s0021g00130.t01	Wine grape	cytosol, nucleus, plastid	7.73	18.01
HORVU5Hr1G072540.26	Barley	cytosol	21.82	17.98
TraesCS5A01G261700.1	Wheat	cytosol	21.69	17.82
PGSC0003DMT400021403	Potato	cytosol	23.34	17.79
Zm00001d045512_P001	Maize	cytosol, mitochondrion	20.44	17.77
TraesCS5B01G259900.1	Wheat	cytosol	22.38	17.44
TraesCS2D01G481300.1	Wheat	cytosol	22.79	17.24
TraesCS2A01G459100.1	Wheat	plastid	18.78	17.11
VIT_15s0045g00880.t01	Wine grape	cytosol	17.82	17.09
TraesCS2B01G507100.1	Wheat	cytosol	22.38	17.07
VIT_15s0045g00920.t01	Wine grape	cytosol	12.15	16.92
Os03t0709200-01	Rice	cytosol	20.86	15.75
VIT_15s0045g00640.t01	Wine grape	cytosol	10.5	15.73
TraesCS7B01G501300.1	Wheat	cytosol	5.94	15.58
VIT_15s0045g00810.t01	Wine grape	cytosol	9.12	15.49
TraesCS2A01G129300.1	Wheat	cytosol	5.25	15.2
TraesCS6B01G448000.1	Wheat	cytosol	5.66	15.13
PGSC0003DMT400030022	Potato	cytosol	10.64	14.69
PGSC0003DMT400027536	Potato	cytosol	8.84	10.26
VIT_15s0045g01010.t01	Wine grape	cytosol	1.38	5.18

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf
UniProt:M1DRT6	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	EnsemblPlantsGene:PGSC0003DMG400042937	PGSC:PGSC0003DMG400042937
EnsemblPlants:PGSC0003DMT400093366	PRINTS:PR00364	PANTHER:PTHR43886	PANTHER:PTHR43886:SF17	SUPFAM:SSF52058	SUPFAM:SSF52540
UniParc:UPI0002965F12	SEG:seg	:	:	:	:

Description

Resistance protein PSH-RGH6 [Source:PGSC_GENE;Acc:PGSC0003DMG400042937]

Coordinates

chr8:-:45039060..45041435

Molecular Weight (calculated)

83437.2 Da

IEP (calculated)

6.475

GRAVY (calculated)

-0.151

Length

724 amino acids

Sequence
(BLAST)

001: MEDLSWIFGI TPTSLLHKNL LSVVEKLDTQ KNEVMEIVSE FTTSTHDDQI LESDGDSLIG NPTLQHLEDD IVHGLNDDLE IIVERLTGQL SDLDIVTISG
101: MGGIGKTTLA RKAYDHLKLR YHFDIRVWIT ISQEYGRRNV LLEALHCISK QTNIDIKKDY DVKDDNELAD LVQKSLKGPR YLVVVDDIWS TDVWDSIRGI
201: FPDYNNRSRI LLTTRETEVA MTLGSWMDVA QTLGEIISSH PDKCLGVLSL SYHHLPNHLK PCFLSMGGFP EDYQVETWRL IQLWIAEGFI RRPGSDKSLS
301: EVAEDYLEDL ISRNLIMVRK KRFNGEIKAC GMHDLLREFC LTEVELTKFM YVETDKIVPT VSAQRHFSFQ KKYGYTAIHR CDLLPSVARS IYLFPKILLR
401: VNLEAFSHFK LLRVLAIFHG YACFRSFPLV ITKLFHLRYL QMQCNDNPPA SIVELQNLQT LIYGREYGYT TLPEKIWMMK NLRCIHIRKA CSLPNPGGKS
501: ILNKHLVIGM PNVEELSNLS FTSCTNEIFS NIPNVKRLII QNTPLLRTGD WANPLIDMSS LTKLEALKCV KLSWYVQTLI SIRSFPTSLK RLTLAGWHNF
601: TWKDMSTLVM LPNLEELKLK DHAAILNVWR LNDEDKFQSL EFLLFCDINL EHWEASSDNF PNLKRLVLKK CKKLKEIPID FGEICSLESI ELHNCSTLAE
701: ESARKIEQEQ EDMGNNFLKV YINI

Best Arabidopsis Sequence Match ( AT3G46710.1 )
(BLAST)

001: MVDAITEFVV GKIDNYLIEE APMLIGVKDD LEELKTELTC IQVYLKNVEV CDKEDEVSKE WTKLVLDIAY DVEDVLDTYF LKLEKRLHRL GLMRLTNIIS
101: DKKDAYNILD DIKTLKRRTL DVTRKLEMYG IGNFNEHRVV ASTSRVREVR RARSDDQEER VVGLTDDAKV LLTKLLDDDG DNKIYMISIF GMEGLGKTSL
201: ARKLFNSSDV KESFEYRVWT NVSGECNTRD ILMRIISSLE ETSEGELEKM AQQELEVYLH DILQEKRYLV VVDDIWESEA LESLKRALPC SYQGSRVIIT
301: TSIRVVAEGR DKRVYTHNIR FLTFKESWNL FEKKAFRYIL KVDQELQKIG KEMVQKCGGL PRTTVVLAGL MSRKKPNEWN DVWSSLRVKD DNIHVSSLFD
401: LSFKDMGHEL KLCFLYLSVF PEDYEVDVEK LIQLLVAEGF IQEDEEMTME DVARYYIEDL VYISLVEVVK RKKGKLMSFR IHDLVREFTI KKSKELNFVN
501: VYDEQHSSTT SRREVVHHLM DDNYLCDRRV NTQMRSFLFF GKRRNDITYV ETITLKLKLL RVLNLGGLHF ICQGYSPWSL PDVIGGLVHL RYLGIADTVV
601: NNLPDFISNL RFLQTLDASG NSFERMTDLS NLTSLRHLTG RFIGELLIGD AVNLQTLRSI SSYSWSKLKH ELLINLRDLE IYEFHILNDQ IKVPLDLVSL
701: SKLKNLRVLK IEVVSFSLFS EETVRFELLV KLTLHCDVRR LPRDMDLIFP SLESLTLVTN LQEDPMPTLQ KLQRLENLVL YSCVYPGAKM FINAQGFGRL
801: RKLKVIIKRL DELEIEEEAM PCLMKLNLDN KDGATKLMIP DRMRAFV

Arabidopsis Description

RPP13L2Putative disease resistance RPP13-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9STE5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.